LOCUS       NM_001142939            3835 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus predicted gene 20604 (Gm20604), mRNA.
ACCESSION   NM_001142939
VERSION     NM_001142939.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3835)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3835)
  AUTHORS   Hansen,G.M., Markesich,D.C., Burnett,M.B., Zhu,Q., Dionne,K.M.,
            Richter,L.J., Finnell,R.H., Sands,A.T., Zambrowicz,B.P. and
            Abuin,A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC132315.4.
            
            Summary: This locus represents naturally occurring readthrough
            transcription between the neighboring AK010878 (cDNA sequence
            AK010878) and Moap1 (modulator of apoptosis 1) genes on chromosome
            12. The readthrough transcript encodes a protein that shares
            sequence identity with the upstream gene product but its C-terminal
            region is distinct due to frameshifts relative to the downstream
            gene. [provided by RefSeq, Dec 2011].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660817.223478.1, AK011927.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            readthrough transcript :: includes exons from GeneID 64113,
                                      100233175
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-270               AC132315.4         116422-116691       c
            271-3835            AC132315.4         98711-102275        c
FEATURES             Location/Qualifiers
     source          1..3835
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12"
     gene            1..3835
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="predicted gene 20604"
                     /db_xref="GeneID:100859931"
                     /db_xref="MGI:MGI:5305180"
     exon            1..270
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /inference="alignment:Splign:2.1.0"
     CDS             66..293
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="AK010878-Moap1 readthrough; Modulator of apoptosis
                     1"
                     /codon_start=1
                     /product="AK010878-Moap1 protein"
                     /protein_id="NP_001136411.1"
                     /db_xref="GeneID:100859931"
                     /db_xref="MGI:MGI:5305180"
                     /translation="MELSGEYVGCDGEPQRLRVSCEASGDADPLQSLSAGVVRMKELV
                     AEFFGTLVEQDAQGLAEDPDDALDGSRTSAC"
     exon            271..3835
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1927..1932
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="hexamer: AATAAA"
     polyA_site      1935
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="major polyA site"
     regulatory      2094..2099
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="hexamer: ATTAAA"
     polyA_site      2113
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
     regulatory      3797..3802
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="hexamer: AATAAA"
     regulatory      3802..3807
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
                     /note="hexamer: AATAAA"
     polyA_site      3812
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
     polyA_site      3831
                     /gene="Gm20604"
                     /gene_synonym="AK010878-Moap1; MAP-1; Moap1"
ORIGIN      
        1 gcaggctggc ttccgcttcc gggtggcgtt tctccgaggc gcgctgttga agctgagtgg
       61 tcgccatgga gctttcgggc gagtacgtcg gttgtgacgg ggagccgcag cggctacgag
      121 tgtcctgtga ggcgtcggga gacgcggacc ctctccagag cctgtcggcg ggcgtggtcc
      181 ggatgaagga gttggtagcg gagttcttcg ggaccctagt ggagcaggac gcgcaaggct
      241 tggcggaaga tccggacgac gctttggatg gctcccggac ctctgcgtgt taaagagacg
      301 agcacgcaca tcactgtaag cggcggcggc ggcggcggcg ccctggtcga attagaattt
      361 aaatactctg agcaccatga cactgagact tctagaagac tggtgcagag ggatggatat
      421 gaatcctcgg aaagcactat tggttgccgg catccctccg acctgcggag tggcagacat
      481 agaggaggcc ctgcaggctg gccttgctcc cttaggggaa cacagactgc ttgggaggat
      541 gttcaggagg gatgagaaca agaatgtagc cctgattggg cttacagtag agactggcag
      601 tgccctggtc cccaaggaaa tacctgcaaa aggaggtgtc tggagagtga tctttaagcc
      661 tcctgatact gatagtgact ttttgtgcag attaaatgag tttttaaagg gggagggcat
      721 gacgatgggt gaattaacca gagttcttgg gaatcggaat gaccctctcg gcctagaccc
      781 gggcataatg atccctgaaa ttcgagcacc catgttagca caggcattaa atgaggccct
      841 taagcctacc ctgcagtatc tgaggtacaa aaagctgagt gtgttctcag gcagggatcc
      901 tccaggacca ggtgaggaag aatttgaatc ttggatgttt catacttccc aagtaatgaa
      961 aacatggcag gtgtcagatg tagagaaaag aaggcggttg atagagagcc ttagaggtcc
     1021 agcatttgaa attattcgag tcctcaagat aaacaacccc ttcattacag ttgcagaatg
     1081 cctgaagacg cttgagacaa tatttgggat tattgataat cctagagcat tgcaggtcaa
     1141 ataccttact acttatcaga agactgatga aaagctgtct gcctatgttc taaggttgga
     1201 gcctttattg cagaaactgg ttcagaaagg agcaattgag aaagaagttg tgaatcaggc
     1261 ccgtctagac caagtcattg ctggggcagt ccacaaatca gttcgaagag agcttgggct
     1321 gccggagggt agcccagccc caggcttact gcagttgctg acactgataa aagataagga
     1381 ggccgaagaa gaagaggtcc tccttcaggc cgaattagaa ggctattgca cttgacccaa
     1441 gacccaaggc tgtcatgagc agaacaagat ggaagagctc attgcagaga tcagcccatc
     1501 cactctttat gctgccaaag taactcgccc tttgtcgtgt tgtttactga atgtctcccc
     1561 aatgttttac tgataaaaat gatgtcattc tacactgata attatttaaa tcaaaagacc
     1621 attctgctag tacagtgtcc cagcaagtca aaagtttata tgcatgttta atagtcatat
     1681 gtgatggtgc tatcagttat caatagtttt caggtgttgc ccacatttat gctgaagacc
     1741 ctgagccaag gctggttaag atatttagtt tcttttatta aaatcagtta tcgattctgt
     1801 gcaatcaaaa agcacaactg aatgctgtgg tcagttctac aactagtttt aggtttgtga
     1861 ctatctgata tgttgccaaa acgtctgctt ctaaatatca ttttcttgga gtaataaaga
     1921 aatgataata aaatatttga tctttgtata cattgtaata ctacatttga aggaaaataa
     1981 ttttttggct ttgtttttaa gacagtttct ctgtgcagct ttagctgtgc tggaacccac
     2041 tctatagacc cagggtagtc tcaaactcag aaatgtgcct cctgagtgct ggaattaaag
     2101 gcctgcacaa ctacactagg ctgaacaaaa gtttttatag tgtgaatctg aaagccactg
     2161 aaattacaga cttagttctt tgaactcttg gcacctaggg gataggaact tgcttgtttg
     2221 acaggaacca gactataaac agattgtggc gagtagtagg cccatcaata ttgaattttg
     2281 agggagaaag ggaagatgaa ggtttgtgtt tttccaaccc tggtgctaca cacctataac
     2341 cccagtgctt aacaagtaaa gccaaagtca ggaagactgg cctctcaagg ccagccagaa
     2401 ctacagaggg aggccctacc tccaaagaga aaactacata cagggaaact aagatcacct
     2461 gggaaatgga tgtatgccca agacgaagca ggcagtaatg agagctgttc tggttcttgc
     2521 aaagctgctg ttctctctac taagggaggg aactacacaa agaatcaagg ccagactgtc
     2581 accgtgtgta catgtagtct tgggagtgtg atagattact ctgagttagg aatacatgga
     2641 aagtttcctt atgttctcca ctgcagaatg gcatgtggac tcttgagagc tgtgattctg
     2701 ctcatgtttg tatagtggct taagatacat tatgcactgt cctgcaggtc actcatttgc
     2761 tgcctcggtg agaaacttta cattttgtat agacacacaa gcattaataa atgccacgcc
     2821 tcttctgtat gtgagaccct aagctgaggg ggtaaactcg acaggataat ccctgctttg
     2881 aaggtttatt cagactcagt attaatggct gacattggat gtatccttgg ccagcgacta
     2941 agtactagct gaagaagaag ctgtctcttc ccacctccca ttttatgaat aagatgaggc
     3001 acagaaaaat aacttgtctg tggttttaca ggtagtaatg tggctagccc ctggctccag
     3061 gtctttttat tctgggtaga tcataggctc agagatcttt aggtgctggt ctttgacgca
     3121 tatatatata tatatatccc ataacatttg gcagtggtgg caacagacag gtggagaaga
     3181 gtgccaccta gtgttatagc tctaggggcc taggatgcta gacccttaat taagcattat
     3241 agatcttgtg gaagcctcta gtaaccccac cctttgctct aaaatactaa gttattgggt
     3301 agacctcatt acaagtatta tagctgttgt atagacttgg gaagttatta ttccttcgcc
     3361 ttgccagtgt taaatcgtac aggtctcggg gtgtctgaga cttgtaaaaa tcacagaagc
     3421 tctctgaaac ctccagtgac aagggcctgc tggttttcat ttccagctct ttacagcctt
     3481 ctctccttta tctctgcctc ttcggttgtc acaacagcca gccacacagc cattttccag
     3541 ctctgcctgc cactccactg tctgctgttg ctgccactct cctggcttta tattgccatc
     3601 ttagcctcac aactaagaag taagctagaa ataggaaagg agggctggag aggtggctcc
     3661 tcgggtaaga gcaccgactg ctcttccaga ggtcctgagt tcaaatccca gcaaccacat
     3721 ggtggctcac aaccatctgt aatgggatct gatgctgcct tctggtgtga ctgaaaacag
     3781 ttacagtgta ctcataaata aaataaatct ttttaaaaaa tggcaaggaa acact
//
