LOCUS       NM_001270792            1841 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus predicted gene 2042 (Gm2042), transcript variant 1,
            mRNA.
ACCESSION   NM_001270792 XM_001472144
VERSION     NM_001270792.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT954323.5, AK135749.1 and AK087852.1.
            
            On Aug 1, 2012 this sequence version replaced XM_001472144.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086484.1, AK135749.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                CT954323.5         146031-146053
            24-1598             AK135749.1         2-1576
            1599-1833           AK087852.1         1151-1385
            1834-1841           CT954323.5         152226-152233
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 42.11 cM"
     gene            1..1841
                     /gene="Gm2042"
                     /gene_synonym="100039087"
                     /note="predicted gene 2042"
                     /db_xref="GeneID:100039087"
                     /db_xref="MGI:MGI:3800544"
     exon            1..103
                     /gene="Gm2042"
                     /gene_synonym="100039087"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..1564
                     /gene="Gm2042"
                     /gene_synonym="100039087"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="oogenesin 1-like isoform 1"
                     /protein_id="NP_001257721.1"
                     /db_xref="CCDS:CCDS56852.1"
                     /db_xref="GeneID:100039087"
                     /db_xref="MGI:MGI:3800544"
                     /translation="MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAIS
                     ALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEG
                     LDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKK
                     ELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVH
                     ADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSL
                     ISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCL
                     NICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQ
                     CSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESF
                     CPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL"
     exon            104..414
                     /gene="Gm2042"
                     /gene_synonym="100039087"
                     /inference="alignment:Splign:2.1.0"
     exon            415..990
                     /gene="Gm2042"
                     /gene_synonym="100039087"
                     /inference="alignment:Splign:2.1.0"
     exon            991..1841
                     /gene="Gm2042"
                     /gene_synonym="100039087"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gattcatagc aaggagagga agtatagatt aggtctcttg gagcctggag tcacagcttt
       61 cccttgcccg aatatggtga tctgtctcca ttgtccagat caggatgatt ctttagaaga
      121 agtcacagag gaatgctatt ccccacccac cctccagaac ctggcaattc agagtctact
      181 gagggatgag gccttggcca tttctgctct cacggacctg ccccagagtc tgttcccagt
      241 aatttttgag gaggccttca ctgatggata tatagggatc ttgaaggcca tgatacctgt
      301 gtggcccttc ccataccttt ctttaggaaa gcagataaat aattgcaacc tggagacttt
      361 gaaggctatg cttgagggac tagatatact gcttgcacaa aaggttcaaa ccagtaggtg
      421 caaactcaga gtaattaatt ggagagaaga tgacttgaag atatgggctg gatcccatga
      481 aggtgaaggc ttaccagatt tcaggacaga gaagcagcca attgagaaca gtgctggctg
      541 tgaggtgaag aaagaattga aggtgacgac tgaagtcctt cgcatgaagg gcagacttga
      601 tgaatctacc acatacttgt tgcagtgggc ccagcagaga aaagattcta ttcatctatt
      661 ctgtagaaag ctactaattg aaggcttaac caaagcctca gtgatagaaa tcttcaaaac
      721 tgtacacgca gactgtatac aggagcttat cctaagatgt atctgcatag aagagttggc
      781 ttttcttaat ccctacctga aactgatgaa aagtcttttc acactcacac tagatcacat
      841 cataggtacc ttcagtttgg gtgattctga aaagcttgat gaggagacaa tattcagctt
      901 gatttctcaa cttcccacac tccactgtct ccagaaactc tatgtaaatg atgtcccttt
      961 tataaaaggc aacctgaaag aatacctcag gtgcctgaaa aagcccttgg agacactttg
     1021 catcagtaac tgtgacctct cacagtcaga cttggattgc ctgccctatt gcctgaatat
     1081 ttgtgaactc aaacatctgc atattagtga tatatattta tgtgatttac tccttgagcc
     1141 tcttggtttt ctccttgaga gagttggaga taccctgaaa accctggaat tggattcatg
     1201 ttgtatagtg gactttcagt tcagtgcctt gctgcctgcc ctaagccaat gttctcacct
     1261 cagagaggtc actttctatg ataatgatgt ttctctgcct ttcttgaaac aacttctaca
     1321 ccacacagcc ctgctgagtc agctgatcta tgagtgttac cctgccccta tagagtgcta
     1381 tgatgacagt ggtgtaatac taacacacag attagaaagt ttttgtcctg agcttctgga
     1441 tatactgaga gccaaaagac agctccatag tgtctccttt caaacaacca aatgctctaa
     1501 atgtggtggg tgctacattt atgatcggca tacccaatgt tgccgttttg tggaactact
     1561 ataagcttga ttgtgaaact gagaaataga aacttagtat tggggactga tgaaatccta
     1621 agtgaatgtc cactgctaaa tggagcatga aaatgtcaat cacctaaaag tctgagatac
     1681 acaggaaagt caataacttc ctctgagctg gtgaatggat gttgcatctg tagaaagtat
     1741 caagcacttg tagtttgaat gtgttacaat agaagcacca ttttatgaga atggcccaat
     1801 ctgttgactg catacaataa atatgttgac tttttttttt t
//
