LOCUS       XM_011249648             658 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 2003 (Gm2003), mRNA.
ACCESSION   XM_011249648
VERSION     XM_011249648.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..658
                     /gene="Gm2003"
                     /note="predicted pseudogene 2003; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 44% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100038997"
                     /db_xref="MGI:MGI:3780173"
     CDS             1..636
                     /gene="Gm2003"
                     /codon_start=1
                     /product="X-linked lymphocyte-regulated protein PM1-like"
                     /protein_id="XP_011247950.1"
                     /db_xref="GeneID:100038997"
                     /db_xref="MGI:MGI:3780173"
                     /translation="MSIKKLWVIPKDGYLLLLDFDSDEEEQAHSEVKRPAFGKHENMP
                     PHVEANEDIRDEQDSMLDKSGKNISFSVEWQRFARSVETPMENWNLLSGELQVRNASE
                     LDLMEVQNPVTHDDGNANPEEVVGDTRKKINNKLCEQKFDMDIQKFNEEQEKSVNNYQ
                     KEQQALKLSECSQSQTLEAIEDMHEKSMEGLMNMETNNYDMLFDVDGEETL"
ORIGIN      
        1 atgtctatta agaaactgtg ggtgatacca aaggatggtt acttattact tcttgacttt
       61 gattcagatg aagaagagca ggctcattct gaagtaaaga ggccagcatt tggcaaacat
      121 gagaatatgc cgcctcacgt agaagcaaat gaagatataa gagatgaaca agacagtatg
      181 ttggataaat ctggcaaaaa cataagtttc tcagtggaat ggcagcgttt tgcacgttct
      241 gtagagacac caatggaaaa ctggaatttg ttaagtggtg aactgcaagt taggaatgct
      301 tctgaattgg accttatgga agtacagaat ccagtaactc atgatgatgg gaatgcaaat
      361 cctgaagaag tagttggaga tacacgaaag aagattaaca acaaattgtg tgagcagaag
      421 tttgatatgg atatacagaa attcaatgaa gaacaagaaa aatcagtgaa caattatcaa
      481 aaagaacaac aagcattaaa actgtctgaa tgtagtcaga gtcagaccct ggaagcaatt
      541 gaagacatgc atgagaagtc catggagggt ttgatgaaca tggagaccaa caactacgat
      601 atgctttttg atgtagatgg tgaagagaca ttatgaagca tactctgaag tactcttc
//
