LOCUS       NM_001370866            1595 bp    mRNA    linear   ROD 20-AUG-2024
DEFINITION  Mus musculus predicted gene, 16527 (Gm16527), mRNA.
ACCESSION   NM_001370866 XM_006502494
VERSION     NM_001370866.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Carninci,P., Kasukawa,T., Katayama,S., Gough,J., Frith,M.C.,
            Maeda,N., Oyama,R., Ravasi,T., Lenhard,B., Wells,C., Kodzius,R.,
            Shimokawa,K., Bajic,V.B., Brenner,S.E., Batalov,S., Forrest,A.R.,
            Zavolan,M., Davis,M.J., Wilming,L.G., Aidinis,V., Allen,J.E.,
            Ambesi-Impiombato,A., Apweiler,R., Aturaliya,R.N., Bailey,T.L.,
            Bansal,M., Baxter,L., Beisel,K.W., Bersano,T., Bono,H., Chalk,A.M.,
            Chiu,K.P., Choudhary,V., Christoffels,A., Clutterbuck,D.R.,
            Crowe,M.L., Dalla,E., Dalrymple,B.P., de Bono,B., Della Gatta,G.,
            di Bernardo,D., Down,T., Engstrom,P., Fagiolini,M., Faulkner,G.,
            Fletcher,C.F., Fukushima,T., Furuno,M., Futaki,S., Gariboldi,M.,
            Georgii-Hemming,P., Gingeras,T.R., Gojobori,T., Green,R.E.,
            Gustincich,S., Harbers,M., Hayashi,Y., Hensch,T.K., Hirokawa,N.,
            Hill,D., Huminiecki,L., Iacono,M., Ikeo,K., Iwama,A., Ishikawa,T.,
            Jakt,M., Kanapin,A., Katoh,M., Kawasawa,Y., Kelso,J., Kitamura,H.,
            Kitano,H., Kollias,G., Krishnan,S.P., Kruger,A., Kummerfeld,S.K.,
            Kurochkin,I.V., Lareau,L.F., Lazarevic,D., Lipovich,L., Liu,J.,
            Liuni,S., McWilliam,S., Madan Babu,M., Madera,M., Marchionni,L.,
            Matsuda,H., Matsuzawa,S., Miki,H., Mignone,F., Miyake,S.,
            Morris,K., Mottagui-Tabar,S., Mulder,N., Nakano,N., Nakauchi,H.,
            Ng,P., Nilsson,R., Nishiguchi,S., Nishikawa,S., Nori,F., Ohara,O.,
            Okazaki,Y., Orlando,V., Pang,K.C., Pavan,W.J., Pavesi,G.,
            Pesole,G., Petrovsky,N., Piazza,S., Reed,J., Reid,J.F., Ring,B.Z.,
            Ringwald,M., Rost,B., Ruan,Y., Salzberg,S.L., Sandelin,A.,
            Schneider,C., Schonbach,C., Sekiguchi,K., Semple,C.A., Seno,S.,
            Sessa,L., Sheng,Y., Shibata,Y., Shimada,H., Shimada,K., Silva,D.,
            Sinclair,B., Sperling,S., Stupka,E., Sugiura,K., Sultana,R.,
            Takenaka,Y., Taki,K., Tammoja,K., Tan,S.L., Tang,S., Taylor,M.S.,
            Tegner,J., Teichmann,S.A., Ueda,H.R., van Nimwegen,E., Verardo,R.,
            Wei,C.L., Yagi,K., Yamanishi,H., Zabarovsky,E., Zhu,S., Zimmer,A.,
            Hide,W., Bult,C., Grimmond,S.M., Teasdale,R.D., Liu,E.T.,
            Brusic,V., Quackenbush,J., Wahlestedt,C., Mattick,J.S., Hume,D.A.,
            Kai,C., Sasaki,D., Tomaru,Y., Fukuda,S., Kanamori-Katayama,M.,
            Suzuki,M., Aoki,J., Arakawa,T., Iida,J., Imamura,K., Itoh,M.,
            Kato,T., Kawaji,H., Kawagashira,N., Kawashima,T., Kojima,M.,
            Kondo,S., Konno,H., Nakano,K., Ninomiya,N., Nishio,T., Okada,M.,
            Plessy,C., Shibata,K., Shiraki,T., Suzuki,S., Tagami,M., Waki,K.,
            Watahiki,A., Okamura-Oho,Y., Suzuki,H., Kawai,J. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (bases 1 to 1595)
  AUTHORS   Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
            Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
            Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
            Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
            Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
            Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
            Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
            Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
            Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
            Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
            Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
            Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
            Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
            Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
            Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
            Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
            Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
            Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
            Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
            Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
            Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
            Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
            Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
            Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
            Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
            Rogers,J., Birney,E. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   4  (bases 1 to 1595)
  AUTHORS   Mural,R.J., Adams,M.D., Myers,E.W., Smith,H.O., Miklos,G.L.,
            Wides,R., Halpern,A., Li,P.W., Sutton,G.G., Nadeau,J.,
            Salzberg,S.L., Holt,R.A., Kodira,C.D., Lu,F., Chen,L., Deng,Z.,
            Evangelista,C.C., Gan,W., Heiman,T.J., Li,J., Li,Z., Merkulov,G.V.,
            Milshina,N.V., Naik,A.K., Qi,R., Shue,B.C., Wang,A., Wang,J.,
            Wang,X., Yan,X., Ye,J., Yooseph,S., Zhao,Q., Zheng,L., Zhu,S.C.,
            Biddick,K., Bolanos,R., Delcher,A.L., Dew,I.M., Fasulo,D.,
            Flanigan,M.J., Huson,D.H., Kravitz,S.A., Miller,J.R., Mobarry,C.M.,
            Reinert,K., Remington,K.A., Zhang,Q., Zheng,X.H., Nusskern,D.R.,
            Lai,Z., Lei,Y., Zhong,W., Yao,A., Guan,P., Ji,R.R., Gu,Z.,
            Wang,Z.Y., Zhong,F., Xiao,C., Chiang,C.C., Yandell,M.,
            Wortman,J.R., Amanatides,P.G., Hladun,S.L., Pratts,E.C.,
            Johnson,J.E., Dodson,K.L., Woodford,K.J., Evans,C.A., Gropman,B.,
            Rusch,D.B., Venter,E., Wang,M., Smith,T.J., Houck,J.T.,
            Tompkins,D.E., Haynes,C., Jacob,D., Chin,S.H., Allen,D.R.,
            Dahlke,C.E., Sanders,R., Li,K., Liu,X., Levitsky,A.A.,
            Majoros,W.H., Chen,Q., Xia,A.C., Lopez,J.R., Donnelly,M.T.,
            Newman,M.H., Glodek,A., Kraft,C.L., Nodell,M., Ali,F., An,H.J.,
            Baldwin-Pitts,D., Beeson,K.Y., Cai,S., Carnes,M., Carver,A.,
            Caulk,P.M., Center,A., Chen,Y.H., Cheng,M.L., Coyne,M.D.,
            Crowder,M., Danaher,S., Davenport,L.B., Desilets,R., Dietz,S.M.,
            Doup,L., Dullaghan,P., Ferriera,S., Fosler,C.R., Gire,H.C.,
            Gluecksmann,A., Gocayne,J.D., Gray,J., Hart,B., Haynes,J.,
            Hoover,J., Howland,T., Ibegwam,C., Jalali,M., Johns,D., Kline,L.,
            Ma,D.S., MacCawley,S., Magoon,A., Mann,F., May,D., McIntosh,T.C.,
            Mehta,S., Moy,L., Moy,M.C., Murphy,B.J., Murphy,S.D., Nelson,K.A.,
            Nuri,Z., Parker,K.A., Prudhomme,A.C., Puri,V.N., Qureshi,H.,
            Raley,J.C., Reardon,M.S., Regier,M.A., Rogers,Y.H., Romblad,D.L.,
            Schutz,J., Scott,J.L., Scott,R., Sitter,C.D., Smallwood,M.,
            Sprague,A.C., Stewart,E., Strong,R.V., Suh,E., Sylvester,K.,
            Thomas,R., Tint,N.N., Tsonis,C., Wang,G., Wang,G., Williams,M.S.,
            Williams,S.M., Windsor,S.M., Wolfe,K., Wu,M.M., Zaveri,J.,
            Chaturvedi,K., Gabrielian,A.E., Ke,Z., Sun,J., Subramanian,G.,
            Venter,J.C., Pfannkoch,C.M., Barnstead,M. and Stephenson,L.D.
  TITLE     A comparison of whole-genome shotgun-derived mouse chromosome 16
            and the human genome
  JOURNAL   Science 296 (5573), 1661-1671 (2002)
   PUBMED   12040188
  REMARK    Erratum:[Science 2002 Aug 23;297(5585):1278]
REFERENCE   5  (bases 1 to 1595)
  AUTHORS   Kawai,J., Shinagawa,A., Shibata,K., Yoshino,M., Itoh,M., Ishii,Y.,
            Arakawa,T., Hara,A., Fukunishi,Y., Konno,H., Adachi,J., Fukuda,S.,
            Aizawa,K., Izawa,M., Nishi,K., Kiyosawa,H., Kondo,S., Yamanaka,I.,
            Saito,T., Okazaki,Y., Gojobori,T., Bono,H., Kasukawa,T., Saito,R.,
            Kadota,K., Matsuda,H., Ashburner,M., Batalov,S., Casavant,T.,
            Fleischmann,W., Gaasterland,T., Gissi,C., King,B., Kochiwa,H.,
            Kuehl,P., Lewis,S., Matsuo,Y., Nikaido,I., Pesole,G.,
            Quackenbush,J., Schriml,L.M., Staubli,F., Suzuki,R., Tomita,M.,
            Wagner,L., Washio,T., Sakai,K., Okido,T., Furuno,M., Aono,H.,
            Baldarelli,R., Barsh,G., Blake,J., Boffelli,D., Bojunga,N.,
            Carninci,P., de Bonaldo,M.F., Brownstein,M.J., Bult,C.,
            Fletcher,C., Fujita,M., Gariboldi,M., Gustincich,S., Hill,D.,
            Hofmann,M., Hume,D.A., Kamiya,M., Lee,N.H., Lyons,P.,
            Marchionni,L., Mashima,J., Mazzarelli,J., Mombaerts,P., Nordone,P.,
            Ring,B., Ringwald,M., Rodriguez,I., Sakamoto,N., Sasaki,H.,
            Sato,K., Schonbach,C., Seya,T., Shibata,Y., Storch,K.F., Suzuki,H.,
            Toyo-oka,K., Wang,K.H., Weitz,C., Whittaker,C., Wilming,L.,
            Wynshaw-Boris,A., Yoshida,K., Hasegawa,Y., Kawaji,H., Kohtsuki,S.
            and Hayashizaki,Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   6  (bases 1 to 1595)
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P.,
            Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M.,
            Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A.,
            Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K.,
            Fujiwake,S., Inoue,K. and Togawa,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   7  (bases 1 to 1595)
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   8  (bases 1 to 1595)
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138585.14.
            
            On Jun 12, 2019 this sequence version replaced XM_006502494.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.24273.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-533               AC138585.14        121044-121576
            534-756             AC138585.14        181617-181839
            757-826             AC138585.14        183019-183088
            827-998             AC138585.14        184886-185057
            999-1595            AC138585.14        189471-190067
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 29.07 cM"
     gene            1..1595
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /note="predicted gene, 16527"
                     /db_xref="GeneID:669780"
                     /db_xref="MGI:MGI:4361133"
     exon            1..533
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             303..1595
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /codon_start=1
                     /product="uncharacterized protein LOC669780"
                     /protein_id="NP_001357795.1"
                     /db_xref="GeneID:669780"
                     /db_xref="MGI:MGI:4361133"
                     /translation="MGDVQVSNWMFGIAIGLKFTHDSRLPTFIPWIADGKMKMNFKVG
                     ELGATMTGGFHSAAPVSATSICRDLLETFTRVLGKILENIGLMKYEEFLSLFVRMQLT
                     KPVSDENITVIDTDFSDIPVRLYLPKRKSERQRPAVIYIHGGAFTLGSCKMLPYDYLN
                     RWTANKLDAVVVGIDYRLAPQYPFPAALEDCVLVIKYFLQDTIVTKYGVDPTRICISE
                     DSSGGTLATAATQMLQNNSEHKIKAQALLYPGLQFIDTLMPSHRDYEYGPFLSRETAM
                     KLACLYVTEDTALPQAMKRNEHMPKGSRHLFNFVNWSDFLPEKYKKNYVYTEPTLGKL
                     NVFYPALVDSRLSPLLVNDSQLQSLPLTYILTCEHDFLRDDGLIYITWLRNVGVQVTH
                     DHLEEGIHGAISLITEPYNLHVGLTIRDKYISWLEKNL"
     exon            534..756
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            757..826
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            827..998
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1595
                     /gene="Gm16527"
                     /gene_synonym="4930449A18Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tacaaggcaa agggcagggg taggtcaaag agaggaatgt cctgtgcttt catcgtgagt
       61 agtgttccat ggaggtcgag aagggaaatg ttaataggaa cagctgctaa taatggttgg
      121 gagagagaag cacagaaaag gtattgggag gaattggggt gggttgttaa gggaagaagg
      181 tcagctgcaa attggatgta ctatagccag gagagggtag ctcgcagcac cttcagagac
      241 tgattttcct gttgcataat attagcatgg gtaaaggctg atttggaggc aggaccaagc
      301 tcatgggaga tgtgcaggtc agcaactgga tgtttggcat agccattggg ttaaagttta
      361 cccatgactc ccgtctgcca acgttcatcc catggatcgc tgatggaaag atgaaaatga
      421 attttaaggt tggtgagctt ggtgctacca tgaccggtgg attccattct gcagctccag
      481 tatctgcaac ctccatatgt agagacctcc tggagacttt cacccgtgtt ttggggaaaa
      541 tacttgaaaa cattggtctt atgaaatatg aagaattttt gtccttattt gtgagaatgc
      601 agctgacaaa accagtttca gatgaaaaca tcacagtgat tgacacagac ttcagtgaca
      661 tccctgttcg cctgtattta cccaaaagga aatctgaaag gcagagacca gctgtcattt
      721 atattcatgg tggtgccttt accctaggaa gctgcaagat gcttccctat gactacctga
      781 accgatggac agcaaacaag cttgatgctg ttgttgtggg aatagactac aggcttgctc
      841 ctcagtatcc attcccagct gcacttgaag attgtgttct tgtgataaag tactttctcc
      901 aggacacaat tgttacaaag tatggagtag atcccactcg catttgtatt tctgaagaca
      961 gttctggagg tacactggca acagcagcaa ctcaaatgct ccagaataat tcagaacaca
     1021 aaattaaggc acaagccttg ctatatcctg gactacagtt tatcgacacc ttgatgccat
     1081 ctcatcgaga ctatgaatat ggtccctttc tttcaaggga gacagcaatg aagttggcat
     1141 gcctatatgt gactgaagac acagcactgc cccaggctat gaagagaaat gaacacatgc
     1201 ccaaaggatc aagacacctg tttaactttg ttaactggag tgacttcctt cctgagaagt
     1261 ataaaaagaa ctatgtttat actgagccca ctcttggaaa gctaaatgtt ttctatccag
     1321 cacttgtgga tagcaggcta tcccctttgc tagtcaatga ctcccagtta cagagtttgc
     1381 cattaacgta catcctcact tgtgaacatg actttctaag agatgatggt cttatttata
     1441 tcacatggct tagaaatgtt ggggttcaag ttactcatga ccacctagaa gaagggatac
     1501 atggagccat atcactcatt acagagccat acaatttaca tgtaggatta acaataagag
     1561 ataagtatat cagttggtta gaaaaaaact tataa
//
