LOCUS       NM_001358087             870 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus predicted pseudogene 15501 (Gm15501), transcript
            variant 1, mRNA.
ACCESSION   NM_001358087
VERSION     NM_001358087.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Mustafi D, Kevany BM, Bai X, Maeda T, Sears JE, Khalil AM and
            Palczewski K.
  TITLE     Evolutionarily conserved long intergenic non-coding RNAs in the eye
  JOURNAL   Hum Mol Genet 22 (15), 2992-3002 (2013)
   PUBMED   23562822
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102906.12.
            
            On Dec 10, 2019 this sequence version replaced NM_001358087.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV661469.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-173               AC102906.12        100517-100689       c
            174-870             AC102906.12        95475-96171         c
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 51.66 cM"
     gene            1..870
                     /gene="Gm15501"
                     /gene_synonym="EyeLinc5"
                     /note="predicted pseudogene 15501"
                     /db_xref="GeneID:100040298"
                     /db_xref="MGI:MGI:3704296"
     exon            1..173
                     /gene="Gm15501"
                     /gene_synonym="EyeLinc5"
                     /inference="alignment:Splign:2.1.0"
     exon            174..870
                     /gene="Gm15501"
                     /gene_synonym="EyeLinc5"
                     /inference="alignment:Splign:2.1.0"
     CDS             187..813
                     /gene="Gm15501"
                     /gene_synonym="EyeLinc5"
                     /codon_start=1
                     /product="ribosomal protein S8-like"
                     /protein_id="NP_001345016.1"
                     /db_xref="GeneID:100040298"
                     /db_xref="MGI:MGI:3704296"
                     /translation="MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIH
                     TVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIV
                     LIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS
                     LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK"
ORIGIN      
        1 gtgagaaggg gatgatgtcc tttccccacc ccaccctttg ttacctgtgg taaccaggaa
       61 tgctggacct gaggtcaaga gcagaagaac tggccttggc cccactggtg ggagagcgga
      121 ccctacacct cacctgggca acacagtgga cctgtccctg aaagcaaaga cagccagcgc
      181 cgagcgatgg gcatctctcg ggacaactgg cacaagcgcc gcaagaccgg gggtaagcga
      241 aaaccctacc acaagaagcg aaagtatgag ctgggacggc ccgctgccaa cacgaagatt
      301 ggccctcgcc gcatacacac agtccgagtt cgaggaggca ataagaagta ccgtgccctg
      361 agattggatg tggggaactt ttcctggggc tctgagtgtt gtactcgcaa aacaaggatc
      421 attgatgttg tctacaatgc atccaacaac gagcttgtcc gcaccaagac cctggtgaag
      481 aactgcatcg tgcttattga cagcacgccg taccgacagt ggtacgagtc ccactatgca
      541 ctgcccctgg gccgcaagaa gggggccaag ctgactcctg aggaggaaga gattttaaac
      601 aaaaaacgat caaagaaaat tcaaaagaaa tacgacgaaa ggaaaaagaa tgccaaaatc
      661 agcagcctcc tggaggagca gttccagcag ggcaagcttc tagcctgtat tgcctcacga
      721 ccaggccagt gtggcagagc agacggctat gtgctcgaag gcaaggaact ggagttctat
      781 ctgcggaaga tcaaagcccg gaaaggcaaa tgagcctcat gtgtagtgta ataaaggtgt
      841 ctgctgttct ataaaaaaaa aaaaaaaaaa
//
