LOCUS       NM_001177471             797 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus predicted gene 15056 (Gm15056), mRNA.
ACCESSION   NM_001177471 XM_001472194 XM_001476080 XM_001476796
VERSION     NM_001177471.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Patil AA, Cai Y, Sang Y, Blecha F and Zhang G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC140205.2.
            
            On Jun 19, 2019 this sequence version replaced NM_001177471.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849375, SAMN00849377
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-541               AC140205.2         49938-50478
            542-628             AC140205.2         51437-51523
            629-797             AC140205.2         51620-51788
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..797
                     /gene="Gm15056"
                     /gene_synonym="Defb52"
                     /note="predicted gene 15056"
                     /db_xref="GeneID:100504014"
                     /db_xref="MGI:MGI:3705859"
     exon            1..541
                     /gene="Gm15056"
                     /gene_synonym="Defb52"
                     /inference="alignment:Splign:2.1.0"
     CDS             484..750
                     /gene="Gm15056"
                     /gene_synonym="Defb52"
                     /note="defensin beta 52; beta-defensin 52"
                     /codon_start=1
                     /product="uncharacterized protein LOC100504014 precursor"
                     /protein_id="NP_001170942.1"
                     /db_xref="CCDS:CCDS52500.1"
                     /db_xref="GeneID:100504014"
                     /db_xref="MGI:MGI:3705859"
                     /translation="MKLLYLLIPVILLISQAMAAPEGCKQERQNEWKDLAQKKGTFIN
                     AFINNYEHHYCDSPTTVCLRRKTKCIRMPGFCPGRSFCCMRTMT"
     exon            542..628
                     /gene="Gm15056"
                     /gene_synonym="Defb52"
                     /inference="alignment:Splign:2.1.0"
     exon            629..797
                     /gene="Gm15056"
                     /gene_synonym="Defb52"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atcctgagag aagagacccc ataaggaaga tcttaagagg taggcaaagg tttttatttt
       61 ctttaggcat tctcattagg cattcttgat tactgtgaag ataagatgtt tgagttgagg
      121 tagaaggtca taattcttaa gtgagggcat ctaaaaacag cgccacaaac atcagaagct
      181 ttttcataaa acagatcacc aattttgtca tttttcactt ttactatctt tgtttctgtt
      241 ctttcctaat ccttgatcca ctaacaggag aaataccctc agctaggcat tcattattaa
      301 acattgttca gttcatggtt atccattgtt gcatatttta acctgcagtc tcaacacagc
      361 agtgtcctcc ctaccacgtg cagccatgac gattaatcct gtcaaagaga accttatatt
      421 ctgctcaaca tcaccattgt ttcttccagg ggcttcaagg cattttccac tgaagtgggt
      481 gccatgaaat tactttacct tctcatccct gttatcctct tgatttctca agccatggca
      541 gctcctgaag gctgtaaaca ggaaagacag aatgagtgga aagatttggc acagaagaaa
      601 ggcaccttca tcaatgcctt catcaacaat tatgagcacc attactgtga ctctcctacc
      661 actgtgtgcc tgaggaggaa aacaaagtgt attcgcatgc cagggttttg ccctggcagg
      721 agcttctgct gtatgagaac catgacctga ggaagttatc tttcctgtcc ttcctgaatt
      781 atatcagaac actgaga
//
