LOCUS       NM_001163195             690 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus predicted gene 14692 (Gm14692), mRNA.
ACCESSION   NM_001163195 XR_001927 XR_035496
VERSION     NM_001163195.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Morimoto K, Numata K, Daitoku Y, Hamada Y, Kobayashi K, Kato K,
            Suzuki H, Ayabe S, Yoshiki A, Takahashi S, Murata K, Mizuno S and
            Sugiyama F.
  TITLE     Reverse genetics reveals single gene of every candidate on Hybrid
            sterility, X Chromosome QTL 2 (Hstx2) are dispensable for
            spermatogenesis
  JOURNAL   Sci Rep 10 (1), 9060 (2020)
   PUBMED   32493902
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX530092.15.
            
            On or before Jul 22, 2009 this sequence version replaced
            XR_035496.1, XR_001927.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.135036.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               BX530092.15        72724-72832
            110-179             BX530092.15        73301-73370
            180-214             BX530092.15        73520-73554
            215-332             BX530092.15        75333-75450
            333-432             BX530092.15        76337-76436
            433-531             BX530092.15        77211-77309
            532-636             BX530092.15        83019-83123
            637-690             BX530092.15        83231-83284
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 34.81 cM"
     gene            1..690
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /note="predicted gene 14692"
                     /db_xref="GeneID:666842"
                     /db_xref="MGI:MGI:3713084"
     CDS             1..690
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /note="synaptonemal complex protein 3-like"
                     /codon_start=1
                     /product="uncharacterized protein LOC666842"
                     /protein_id="NP_001156667.1"
                     /db_xref="CCDS:CCDS53083.1"
                     /db_xref="GeneID:666842"
                     /db_xref="MGI:MGI:3713084"
                     /translation="MPPKGKKAKSKSVKRPQDSSDTQSDDVIQRRVPRTPAEQPVVIE
                     ISDESTSSDQDDQQARESVQKTAKKRQGDVTESHLAKKKQFCQDVVTSVKRLSEKLVS
                     IYKRQKRERTMFHSNYSKSLQSLFQQWDMSVEKVGQEEDSFINSSHQHEKIIYNTMMA
                     QKATIDQAKAISDQFLKNIQELEEKHKLLDALEQNRLENEMKNLKKKLVADNHQQDLA
                     VLESCLHSMFS"
     exon            1..109
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            110..179
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            180..214
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            215..332
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            333..432
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            433..531
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            532..636
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
     exon            637..690
                     /gene="Gm14692"
                     /gene_synonym="666842"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgccaccca aggggaagaa ggctaaaagc aaaagtgtga agcgcccaca ggattcttcg
       61 gatactcaat ctgatgatgt catccagcgc agagttcccc gcacaccagc agagcagccc
      121 gtggtgatcg agatcagtga tgagagtact tcatcagatc aagatgatca gcaggcaagg
      181 gaatctgttc agaagacggc aaaaaaacgt caaggtgacg ttacagagtc acaccttgca
      241 aagaaaaaac agttttgtca agatgtagta acttctgtta agcgcctgag tgaaaaactt
      301 gtcagcattt ataaaaggca aaaaagggaa aggactatgt tccattccaa ctattctaag
      361 agcctccagt ctttgtttca acagtgggac atgagtgtgg aaaaagttgg gcaagaagaa
      421 gacagtttta ttaattcatc ccatcaacat gagaagataa tttataacac tatgatggct
      481 cagaaagcaa ccatagatca agcaaaagct atttctgatc aatttctaaa gaatatccaa
      541 gaacttgagg agaagcacaa acttctcgac gctcttgagc aaaacagatt ggaaaacgaa
      601 atgaaaaacc tgaagaagaa gcttgtggca gataatcatc aacaggactt ggcagtttta
      661 gaatcctgtc ttcattctat gttctcctag
//
