LOCUS       NM_001085520             847 bp    mRNA    linear   ROD 14-FEB-2024
DEFINITION  Mus musculus PRAME like 62 (Prame62), mRNA.
ACCESSION   NM_001085520 XM_355504 XM_915374
VERSION     NM_001085520.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Skarnes,W.C., Rosen,B., West,A.P., Koutsourakis,M., Bushell,W.,
            Iyer,V., Mujica,A.O., Thomas,M., Harrow,J., Cox,T., Jackson,D.,
            Severin,J., Biggs,P., Fu,J., Nefedov,M., de Jong,P.J., Stewart,A.F.
            and Bradley,A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL671999.6.
            
            On Feb 15, 2008 this sequence version replaced NM_001085520.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AA545510.1, AA549403.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-108               AL671999.6         112828-112935
            109-422             AL671999.6         114077-114390
            423-573             AL671999.6         114819-114969
            574-847             AL671999.6         115946-116219
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 46.99 cM"
     gene            1..847
                     /gene="Prame62"
                     /gene_synonym="Gm12789"
                     /note="PRAME like 62"
                     /db_xref="GeneID:381536"
                     /db_xref="MGI:MGI:3649399"
     exon            1..108
                     /gene="Prame62"
                     /gene_synonym="Gm12789"
                     /inference="alignment:Splign:2.1.0"
     exon            109..422
                     /gene="Prame62"
                     /gene_synonym="Gm12789"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..630
                     /gene="Prame62"
                     /gene_synonym="Gm12789"
                     /codon_start=1
                     /product="uncharacterized protein LOC381536"
                     /protein_id="NP_001078989.1"
                     /db_xref="CCDS:CCDS38823.1"
                     /db_xref="GeneID:381536"
                     /db_xref="MGI:MGI:3649399"
                     /translation="MSTYNPPTLLQLALDGVLRKDSIDFSDLEYLPITLFPPLFIKAF
                     NSRHTEIVKKMVATWPFPCLPVGTLLKTAGVEMLQAVLDGIDILLTQNVSLRCKLQVL
                     ELRDVHQHFWDVWAGREDEVHSAETKSEKKVGERISRKPPRGVKEYYVHSYQTDWSVQ
                     TFCL"
     exon            423..573
                     /gene="Prame62"
                     /gene_synonym="Gm12789"
                     /inference="alignment:Splign:2.1.0"
     exon            574..847
                     /gene="Prame62"
                     /gene_synonym="Gm12789"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctctctct cctttgcctg cttgccatgt gggactgagc aacctctaga tccttggact
       61 tctattcaca gctgctactg accattgttg ggagttggac tgcagactgt tccttctgac
      121 tgaatatcta tcaggatgag cacctacaac cctcccacac tcctgcagct ggcactggac
      181 ggggtgctga ggaaggattc catagacttc tctgatctgg agtacctgcc catcacgctc
      241 ttcccaccac tcttcataaa ggccttcaat agcagacaca cagagatagt aaagaaaatg
      301 gtggcaacct ggccctttcc ctgcctccct gtggggacac tgcttaaaac cgctggtgtg
      361 gagatgctgc aagctgtgct ggatggcata gatatactgc tgacacagaa tgttagtctc
      421 aggtgcaagc ttcaagtgtt ggagttgaga gatgtacacc agcatttctg ggatgtatgg
      481 gctggaagag aggatgaagt ccactcagca gagactaaga gtgagaagaa agtaggagag
      541 cgcatttcta gaaaaccacc gagaggtgtg aaggagtact atgtgcacag ttatcaaact
      601 gactggtcag tgcagacctt ctgtttatga aaagcaattt atagagtggc agatgatttc
      661 acttcatgat actcagaaga gagatggtat gaacattttg aacatggctg aagcaaaagt
      721 tcttgcccag agaactgatt gtgctgagac ctgttaactc ttcaattgtg agctcagaga
      781 gagggcaagc caaccatttt attccctttg tcactgtatc aggtaacatt aaaataattt
      841 tactctg
//
