LOCUS       NM_001081284            2016 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus predicted gene 12695 (Gm12695), mRNA.
ACCESSION   NM_001081284 XM_006503261 XM_885165
VERSION     NM_001081284.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL772139.9 and AL683816.6.
            
            On or before May 28, 2020 this sequence version replaced
            XM_006503261.2, NM_001081284.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.3266506.1,
                                           SRR5189685.289619.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-46                AL772139.9         63075-63120         c
            47-179              AL772139.9         61424-61556         c
            180-414             AL772139.9         45959-46193         c
            415-555             AL772139.9         39102-39242         c
            556-819             AL772139.9         38231-38494         c
            820-941             AL772139.9         34305-34426         c
            942-1107            AL772139.9         30426-30591         c
            1108-1205           AL772139.9         25516-25613         c
            1206-1270           AL772139.9         15345-15409         c
            1271-1344           AL772139.9         7736-7809           c
            1345-1549           AL772139.9         4488-4692           c
            1550-2016           AL683816.6         214590-215056       c
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 44.79 cM"
     gene            1..2016
                     /gene="Gm12695"
                     /note="predicted gene 12695"
                     /db_xref="GeneID:620779"
                     /db_xref="MGI:MGI:3650206"
     exon            1..46
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            47..179
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..1710
                     /gene="Gm12695"
                     /codon_start=1
                     /product="uncharacterized protein C1orf87 homolog"
                     /protein_id="NP_001074753.1"
                     /db_xref="CCDS:CCDS38815.1"
                     /db_xref="GeneID:620779"
                     /db_xref="MGI:MGI:3650206"
                     /translation="MSSPWKTSQSSVPMPEMIVKIVGSKHFRYFIEKPMNKQNEKLKT
                     EPQTSLQKPRNDYSRRVSRDLPGPTDSSEQQITANPAEKEESKHQRSSLKPESNQKFL
                     TRVFSNRFLDGRISYEANVHCSSVPTGDQSLSYMHSLPRRKSVGWCLEHTAKDSSGQA
                     EEIVQRPSVMTREDSFLTTLVRRELNSRPLSSNLLDKLQKELKTLDPISSGFLHQSQL
                     SCLFLRHKVPLPLLTVKLLCQRFSRRCSPEMVNYGEVLCFLKEATKDNLQQNGTAGYS
                     NSRKTSSPSYHKQSIPPQDSSLLSEVNKSLLEILKMALRPCQGKLSIDCLNMSFRKED
                     HSFSGCLPLPKVISICSKHGLYVTMTLLETLLHHQELGYRGEIKWKNFVKWLNRASAD
                     LSCDMPAGKNKKETQGDLVDIPERPQRKTEHVKTPEENLQTKNPTTMTSAPEDPVTFF
                     KNRPVSQPVEHLAVKKDGQSELWIDRFRKLENALYLCDLSNTGVLERERARRLIHNYN
                     LIYSLSLSPRRINQALQRYRSGENIILEPALQYLKEL"
     exon            180..414
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            415..555
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            556..819
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            820..941
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            942..1107
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            1108..1205
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            1206..1270
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            1271..1344
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            1345..1549
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     exon            1550..2016
                     /gene="Gm12695"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1979..1984
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm12695"
                     /note="hexamer: AACAAA"
     polyA_site      2016
                     /gene="Gm12695"
                     /note="major polyA site"
ORIGIN      
        1 agtcgcaagc tcctgaactc cctgggtagg aagtgccact ttggcggatc tgacaagatt
       61 tggagaggga ccatgtcttc accttggaag acctcgcaaa gttcagtgcc aatgccggaa
      121 atgatagtga aaattgttgg aagtaaacac tttcgttact tcatagaaaa gccaatgaat
      181 aagcagaatg agaagttgaa gacagaacct caaacctcac tccagaaacc caggaatgat
      241 tattcaagac gggtgagcag agacctgcca ggacccactg actcttctga gcaacaaata
      301 actgctaacc cagctgagaa ggaagaaagc aagcaccaaa gaagcagcct aaaacccgaa
      361 agcaatcaaa agttcttaac cagagtattc agtaacaggt tcctggatgg caggatttcc
      421 tatgaggcaa atgtccactg cagctctgta ccaacaggag accaatcact atcctatatg
      481 catagtctcc ccagaagaaa gtctgtaggc tggtgcttgg aacatacagc aaaggacagc
      541 tctggccaag cagaggaaat tgtccaaagg ccaagtgtaa tgacaagaga agattctttt
      601 ctaaccacat tggtcagaag agaactcaac tcacgcccat tgagctccaa tttgttggac
      661 aaacttcaga aagagctgaa gactctggat cccatctcct caggctttct ccatcagtcg
      721 cagctgagct gcctcttcct aaggcataaa gtccctctgc cactactaac agtcaagctc
      781 ctctgccaaa gattctctag aaggtgttct ccggaaatgg taaattatgg agaggtactc
      841 tgttttttga aagaagcaac taaagataat ttacagcaaa atggaacagc tggatatagt
      901 aactcaagga aaacttcaag tccaagctac cataaacaaa gcattccacc tcaagattcc
      961 agcttactgt ctgaagtgaa caagagcctg ctagagattt tgaagatggc actaagacca
     1021 tgccaaggca aactcagcat agactgcctc aacatgagct ttcgaaaaga agatcactca
     1081 ttctctggct gcctacccct gcccaaggtc atatctatat gtagcaagca tggactgtat
     1141 gtaaccatga ccctgctgga aacattgctc caccaccaag aactgggtta ccgaggtgaa
     1201 ataaagtgga agaactttgt taagtggctg aacagagctt ctgctgattt gtcatgtgac
     1261 atgccagcag gaaagaataa aaaggaaacc caaggggact tggttgacat ccctgaaaga
     1321 ccccaaagaa aaactgaaca tgtgaaaact ccagaagaaa atctgcagac aaaaaaccct
     1381 accactatga cgtcagcacc agaagaccct gtgaccttct ttaagaacag gccagtctct
     1441 cagcctgttg agcatctggc tgtgaagaag gatgggcaat cagagttatg gatagacagg
     1501 ttcagaaagc tggaaaatgc cctttacctg tgtgacctga gcaacacagg agtgctggag
     1561 cgggagcgag ccaggcgcct cattcacaac tacaacctca tttacagctt gtctctgagt
     1621 ccccggagaa tcaaccaggc cttgcaaaga taccgttctg gagaaaacat aatcttggag
     1681 ccagcacttc agtacttaaa ggagctgtaa caacaagcac acaccaggag agcagctgtc
     1741 tctctcattt cccctttatg gggacctgtg attgtcctca gtttgaggtc tgggcagagg
     1801 tgttgtcaga gctgagatgt tctagccagt tttgaccagg acttggctgt ggtgaagaac
     1861 agttcacaat gatcagagag atgtagcttt ctcttctgac ataagagtca tttgaagggc
     1921 tcttctgttc ttttagtgct tattatcaat gtgtttgata tttattttct acctttctaa
     1981 caaactgttt taaaaacacg agttcatgtg tctaaa
//
