LOCUS       NM_001243100             896 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus predicted gene 11837 (Gm11837), transcript variant 1,
            mRNA.
ACCESSION   NM_001243100 XM_001474235 XM_001474395
VERSION     NM_001243100.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 896)
  AUTHORS   Aboudehen K, Farahani S, Kanchwala M, Chan SC, Avdulov S, Mickelson
            A, Lee D, Gearhart MD, Patel V, Xing C and Igarashi P.
  TITLE     Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant
            polycystic kidney disease and regulates mTOR signaling
  JOURNAL   J Biol Chem 293 (24), 9388-9398 (2018)
   PUBMED   29716997
REFERENCE   2  (bases 1 to 896)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL831792.6.
            
            On or before Jul 22, 2011 this sequence version replaced
            XM_001474235.2, XM_001474395.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CN835596.1, CA464091.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               AL831792.6         130812-130941
            131-229             AL831792.6         136612-136710
            230-303             AL831792.6         138655-138728
            304-379             AL831792.6         142371-142446
            380-486             AL831792.6         147610-147716
            487-896             AL831792.6         152792-153201
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 6.44 cM"
     gene            1..896
                     /gene="Gm11837"
                     /note="predicted gene 11837"
                     /db_xref="GeneID:100038514"
                     /db_xref="MGI:MGI:3702175"
     exon            1..130
                     /gene="Gm11837"
                     /inference="alignment:Splign:2.1.0"
     exon            131..229
                     /gene="Gm11837"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..510
                     /gene="Gm11837"
                     /codon_start=1
                     /product="uncharacterized protein C8orf88 homolog"
                     /protein_id="NP_001230029.1"
                     /db_xref="GeneID:100038514"
                     /db_xref="MGI:MGI:3702175"
                     /translation="MTMETKKLIGKPLQPARPVRHLSSPPGPVFPFNFQNEYPCSTQC
                     LQSGVGRCKTNGMQAFSQGLNEQQQHQSPVKKERIKYSRDFLLKLSSVSICRKKPDFL
                     PDHPIVLQKPENNQSFK"
     exon            230..303
                     /gene="Gm11837"
                     /inference="alignment:Splign:2.1.0"
     exon            304..379
                     /gene="Gm11837"
                     /inference="alignment:Splign:2.1.0"
     exon            380..486
                     /gene="Gm11837"
                     /inference="alignment:Splign:2.1.0"
     exon            487..896
                     /gene="Gm11837"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgcggcga cccaggccgc gaggcgacgc gcggcgggag ccgttccccg acggcagccg
       61 ggcgctcggc cgccgtgtct gggctgagcg ccgcgacgcc gcgccggaaa ccctcctggg
      121 tcttgaggcg tatggaacct caaggtcttt atgacaatgg aaacaaaaaa attgattggc
      181 aaaccgcttc aaccagcaag acctgttcgt catctctctt ctcctccagg accagtgttc
      241 cctttcaact ttcagaatga atatccatgc agcactcaat gcttacaaag tggagtgggc
      301 agatgtaaga cgaatggaat gcaagccttt tctcaaggtc tcaatgagca acagcaacac
      361 cagtctccag ttaaaaaaga gagaattaaa tatagcagag atttcttgtt gaagctttca
      421 agtgtttcca tctgcagaaa aaaaccagac tttctgcctg atcatcccat tgtacttcaa
      481 aaaccagaaa acaaccaaag ttttaagtag cattttaaga acagatgaat ttgaagataa
      541 agaattattc attttatatt ttggacacct gcaaatgaag tggacctagt acaataacta
      601 atggactgtg acgattcaat ttatttttac ttttgatggt tggctatttg gcttctcata
      661 aaaggagaaa gagatatttt aaagtataaa gaatttttct aatcagtttc agctttgcag
      721 gcagttcctg caaaaattgg gaaataacac tcgaaagtgg ggatgttgtt ggtgaagtgg
      781 gaagactgta ttataatttg catgctactt gcaattcttg tttctcacca cttgtaataa
      841 tggaatggaa atgtaagctg taaagattct caaatataaa gtatttgcta tgatgt
//
