LOCUS       XM_036157114            3249 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene 11633 (Gm11633), mRNA.
ACCESSION   XM_036157114
VERSION     XM_036157114.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3249
                     /gene="Gm11633"
                     /note="predicted gene 11633; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4 long
                     SRA reads, 3 Proteins, and 63% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102633230"
                     /db_xref="MGI:MGI:3650676"
     CDS             2358..2780
                     /gene="Gm11633"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 5A,
                     mitochondrial-like"
                     /protein_id="XP_036013007.1"
                     /db_xref="GeneID:102633230"
                     /db_xref="MGI:MGI:3650676"
                     /translation="MLATALCGYAAAAAARGLLHPVSALSPATTTVCSICCYSHGSHE
                     TDEEFDACWVTYFNKPDTDAWELRKGMNTLVGYDLVSEPQISDAALWAWRWLNDFASA
                     VRILEVVKDKAGLHKEIYPYVIQELRPTLNELGISSPE"
ORIGIN      
        1 ttggtctccc tggccagtta acacagtact caatattcat tattgtgtct tactcaggat
       61 gcgaagggca aggagcttac accgtccaca gacagtcacc gtcactgcat acaacctgct
      121 ctttgtcccc tggagggtgg tccctaggtg cttggactgg aggtaatatt ggtttgacat
      181 tacaaagaga gttggtcatt gtaagaaagg aggcagtagc catgccatgt gcacaaaacc
      241 ttcatctgtg accttcctgg ttcccaggca acagggtgag ttcagacttt ttttcctgaa
      301 gccactctgt aaattctggt accttctcca gcaccctcca tctcatagca gcctgtggga
      361 cgcctccagg aattcttagg gttccgaggg ggcatcattc gaaaatgact gttccaggat
      421 gaggtgtgtg ggcttaggtg tcagcccgat ccaagttcag aacccaacca cgatgatggt
      481 cggtgccaag catcaccgat ttctcgggtt accgcgcctt cttcagcagc ctcggatgcc
      541 gcagtcttgc aaggcttcca ctgagcagga caatgtaaat gcaacatcag tgtaaagctc
      601 actgctggtg cccacagcag gcgtccagca agtgcgagtt cttgcatgat tttgttggac
      661 atttccatga aatgttttga cagcagaggc tatctcctca gacattttcc ccctccatcc
      721 tattgtctgc atggcaaggg ctcttctctc tcaaattgct cacacactca caccccgcct
      781 cccaggcact ttgctctgaa gctctgacag tggggctgta tttaccttgg ctgagcttag
      841 gatgtttctg gaaaagaaac cccagctgag ccctcacaat cagtctatta cctgccagcc
      901 agttggctgg tatgcatgct gggcaagcaa ccaggggcac ccgcagagct gagctgacag
      961 gagagcttga ctggccaggc ttgtcaggac agcatttagg cagctggggc caaccagtaa
     1021 agtgctgctc aaagggtctc ccaattgccc ctgtcagcaa gggttacaaa aacacccaga
     1081 atgtatttta gatccagcta tttgaaacat tcctggaaca gcagcaacaa agtcacttag
     1141 aagcactgtt acaagtgcag agctctgctg ggcatggtgg cacatgcctt caacacttgg
     1201 gaggcagagg taggcagatc tctgagttca ggctagcctg gtctacaaag tgagttctgt
     1261 ggcagacagg gcttcaggag gctgaggtag atagatctct gtgagttcaa ggaagtctag
     1321 gctacatgtt aaatttcatg ctggccaaga ctacacagtg agatcctgtc tccaaaaata
     1381 aataaataaa tagataaata aataaataag ccatatacgg agggcttatt gtataatctt
     1441 agtacttggg aagctgagac aggagggttg ctaccagctc aaggccagct taagctacag
     1501 agtgagttcc aggacagcca gagctaaaga gagaaactct taaataaact aaaaaagaaa
     1561 gaaagtgcat cgtcctgggt taaccccaga cctgcagaac ctgagcctgc atctgcacaa
     1621 aaccagtggt acttggttct ggctacttgt gctgggaagg tttttttaaa ggcagattta
     1681 aaaggagaaa aaaaaggctt tgccagcaca tcacccatcc ttaaggagat ggtggctgag
     1741 acctggccag tgaagcagtg aaacagaact ggccttcttg tctggactct gccactcatt
     1801 agatgcgtga ccttaggcag gtggctccct ctgtctgttc tggatctgag ctagccagac
     1861 ggctcagtgg gtaaaggcac tgagcctgag gtggacgttc aattcccaag aaccatatag
     1921 tggaaggagg aattcaactc ccaaaagcac atttgtgatt gtgatccttg cacacttgtg
     1981 atggcacaca cacacacaca cacacacaca cacacacaca cacacaaata cagtaaccaa
     2041 aagaaagaaa tgtttgccgg tgaggtgaat ggggcagaga tctgcaccca aacggttccg
     2101 ttaacattat ctcctatttt cctctcacct cagctgtgca cttgataagg aactctggta
     2161 taatgtacca ctgatgggac ctttcagaat ggtgcgatcc ttaggagaga ttcacgaagt
     2221 tcttgaatga ttagcttgat taccacaaga gcaagctgtt agaaggtgag accaacctgt
     2281 gttttctctc ttctgcaaac tcctgaattt aaaatatgta gcccttcacc ttcagccagt
     2341 gtgctgtggt caccgtcatg ctcgccactg ccctctgtgg ctatgccgca gccgcggctg
     2401 cccgaggcct cctgcacccc gtctcggctc tcagccccgc caccaccact gtctgttcca
     2461 tttgctgcta ttctcatggg tcacacgaga cagatgagga gtttgatgct tgctgggtga
     2521 catacttcaa caaaccagac actgatgcct gggaattgcg taaagggatg aatacacttg
     2581 ttggctatga tctggtttct gagccccaaa tcagtgatgc tgcgttgtgg gcatggagat
     2641 ggttaaatga ttttgctagt gctgttcgca tcttggaggt tgttaaggac aaagcaggac
     2701 ttcataagga aatctacccc tatgtcatcc aggaacttag accaacttta aatgaactgg
     2761 gaatctccag tccagagtaa ctgggccttg acaaagtgta aactcccttc catgggcttc
     2821 ccaaggactt aactgctgtt gctacttgat tgaaacagtt gcctggaaat gtttttattt
     2881 gaacaaattt tcctttgagt atccaaccac gtaatagcaa cttggacttt aataaaggga
     2941 aatgagtttt aactgaaaaa aaaaaaagcc ttgtgggagt cggttcattt cactatgtgg
     3001 gtcctgggga ttgaactgag taaaacacca cagccaaaag caagggaggg agggcagggt
     3061 ttgcgtcatc tcacacttgc aggtaacagc ccagcaatag gaaagtcagg gcaggagctc
     3121 aaacagggca ggaacctggg ggcaggaact ccacttgttc cccataactt gttgttcagc
     3181 ctgctttctt atagatctgg gcaccggctg cccaaggttg gcactgccac agtgagtgag
     3241 accctccca
//
