LOCUS       NM_001164727            1955 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus predicted gene 10406 (Gm10406), mRNA.
ACCESSION   NM_001164727 XM_001471507
VERSION     NM_001164727.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Tu S, Shin Y, Zago WM, States BA, Eroshkin A, Lipton SA, Tong GG
            and Nakanishi N.
  TITLE     Takusan: a large gene family that regulates synaptic activity
  JOURNAL   Neuron 55 (1), 69-85 (2007)
   PUBMED   17610818
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC164618.3.
            
            On Sep 13, 2009 this sequence version replaced XM_001471507.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.3254783.1,
                                           SRR10662772.1474320.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN01164138,
                                           SAMN01164139 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-85                AC164618.3         135871-135955       c
            86-199              AC164618.3         134382-134495       c
            200-334             AC164618.3         121143-121277       c
            335-497             AC164618.3         120248-120410       c
            498-629             AC164618.3         119166-119297       c
            630-812             AC164618.3         118307-118489       c
            813-1955            AC164618.3         114621-115763       c
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 4.16 cM"
     gene            1..1955
                     /gene="Gm10406"
                     /note="predicted gene 10406"
                     /db_xref="GeneID:100038847"
                     /db_xref="MGI:MGI:3711272"
     exon            1..85
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
     exon            86..199
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
     exon            200..334
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
     CDS             205..822
                     /gene="Gm10406"
                     /note="alpha8-takusan; alpha9-takusan; alpha10-takusan"
                     /codon_start=1
                     /product="alpha7-takusan"
                     /protein_id="NP_001158199.1"
                     /db_xref="CCDS:CCDS49396.1"
                     /db_xref="GeneID:100038847"
                     /db_xref="MGI:MGI:3711272"
                     /translation="MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHR
                     SARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTE
                     FNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVR
                     ILLNENRRLLVEQAGYKCPVGKKRGSLRRPARTSVSQVPRNSSVK"
     exon            335..497
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
     exon            498..629
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
     exon            630..812
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
     exon            813..1955
                     /gene="Gm10406"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggtcagcgg gcgtaggccg gcaggatgga gccgcagcac gtgcgccccg tgcttggatc
       61 ccagagccca gcctgggagg aaatgaaaat cttcagtact cgtctcgcca catgaacgtt
      121 taaagctaaa accttcacag agatgtgaga tggagcagga gcagtggcta attgctgaac
      181 tcttcaaaac ttggagtatc aggaatgttt tcctggctgc tcaggctatt tcagaaagag
      241 aatggcgatg aaggagagac cagaccaaca gagaaggaag agggaatcct ttctcatgaa
      301 aaaggaagaa ggaaatcatt ctggagaagg cacaggtctg ctagaaatac ttcaacccaa
      361 aattccaaaa tgactaagaa gagatcaaaa ataaatgaac tagaagaact gaaattggat
      421 atgaggaaga tcagcaatga catggaggaa atgtgtggaa tcctgaacct ttacatgtat
      481 gaggatttga actacaggat gaacactgaa ttcaacatca ttaaatcaca acatgagaag
      541 acaatgttgg atatgaataa aatgatccag tccataattg gttccatgca gtactccaag
      601 gaactgatag aagataacta ttcctacagc attaaggagg accacctcct ccgtgagtgc
      661 actcaactca acgaaaacgt aaggatatta ctgaatgaga acagaaggct gctggtggag
      721 caggctggct ataagtgtcc tgtggggaag aaaagaggtt ctctgaggag gccagcaaga
      781 acatctgtgt cccaagtgcc aaggaacagc agtgtgaaat agtccagctg aaagcagaac
      841 atggcacaga ccaggacatg atctccctca aagagaagtg ctggaggaag agcactgagt
      901 gtgcacagga aatacaccac tgttgcctct catccctaat aaccatggct gtaatgggct
      961 gtatgctcct cctttatttt gtttctttgg tatgaacagg ccttaatttc atctagcctc
     1021 tggcccagga agagtgcaca tttaaaggga ctcagagaaa tgctgagaca catcaagagc
     1081 tgctgggcat ccaggaagaa tctgagtgca aatttatctt ttcctgatgg gtcatcatca
     1141 ataattacat ggagatcagt caacaaaatt gaaaaacctt ggatccaagt ttacaacatg
     1201 tgttctgctt tgacttggga ggccatatcc ttcagaccca cactccaaaa ggagagtgtt
     1261 gcttaaattt ctcctgcaaa gattgctacc tccaggaact gcttttctac taagttgcca
     1321 aggacatcca caggctgtaa ggctgtgcta caaaatgagc agactaagaa ttttgctttg
     1381 cacaattttt gtggtttgat tttggtttga gttttgatta gtttagttat ttggtttttc
     1441 ttgttttcat tcaaagtttt gttatttatt ggttatttat tgttctttta agtaatttga
     1501 tattttgata aggttataca cagtacatat tgactgtcag cttttagtta caattgagta
     1561 cattgcattt attcttatga ctaacacagt gatctccaac tcttcactct aagagccttg
     1621 ttatttcagg tgtgatcatg aaatcccaca gatatcagac ccagatggat ctctgcactc
     1681 ttcatgggac ttgggctcca tagtttcttc tgagccagac tgaactacaa agtccttcat
     1741 acattcagta tggagagtgt gtccaactgt ctggatagga acttaatgat ggaatactta
     1801 cccatgctgc atcgttgctg tcaaatattt agctactgtg aaaatactgt ggatgatggt
     1861 gttgaacgca ttaatggcaa atacatcagt gtttctgtaa tagctctcat taaatcaaag
     1921 catagtctaa gggaataaaa agctgtcaga aaaca
//
