LOCUS       NM_001099347             921 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus predicted gene 10230 (Gm10230), transcript variant 1,
            mRNA.
ACCESSION   NM_001099347 XM_001477510 XM_001477530
VERSION     NM_001099347.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Escalier D, Eloy L and Garchon HJ.
  TITLE     Sex-specific gene expression during meiotic prophase I: Xlr (X
            linked, lymphocyte regulated), not its male homologue Xmr (Xlr
            related, meiosis regulated), is expressed in mouse oocytes
  JOURNAL   Biol Reprod 67 (5), 1646-1652 (2002)
   PUBMED   12390899
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Calenda A, Allenet B, Escalier D, Bach JF and Garchon HJ.
  TITLE     The meiosis-specific Xmr gene product is homologous to the
            lymphocyte Xlr protein and is a component of the XY body
  JOURNAL   EMBO J 13 (1), 100-109 (1994)
   PUBMED   8306953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX813306.4.
            
            On Jan 13, 2018 this sequence version replaced NM_001099347.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.30809.1,
                                           SRR17253011.2379779.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-137               BX813306.4         88571-88707         c
            138-257             BX813306.4         86982-87101         c
            258-324             BX813306.4         81307-81373         c
            325-359             BX813306.4         80733-80767         c
            360-485             BX813306.4         77512-77637         c
            486-549             BX813306.4         77139-77202         c
            550-631             BX813306.4         68857-68938         c
            632-730             BX813306.4         66309-66407         c
            731-921             BX813306.4         65799-65989         c
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 18.4 cM"
     gene            1..921
                     /gene="Gm10230"
                     /note="predicted gene 10230"
                     /db_xref="GeneID:100042175"
                     /db_xref="MGI:MGI:3710515"
     exon            1..137
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            138..257
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..799
                     /gene="Gm10230"
                     /note="Xlr-related, meiosis regulated"
                     /codon_start=1
                     /product="uncharacterized protein LOC100042175"
                     /protein_id="NP_001092817.1"
                     /db_xref="CCDS:CCDS53029.1"
                     /db_xref="GeneID:100042175"
                     /db_xref="MGI:MGI:3710515"
                     /translation="MSIKKLWVIPKDGYLLLLDYDSDEEEEQAHSEVKRPAFGKHENM
                     PPHVEADEDIRDEQDSMLDKSGENVSFSEEWQRFARSVETPMENWNLLSGEQQVRNAS
                     ELDLMEVQNPVTHDDGNANPEEVVGDTRKKINNKLCEQKFDMDIQKFNEEQEKSVNNY
                     QKEQQALKLSECSQSPTMEAIEDMHEKSMEGLMNMETNNYDMLFDVDGEETL"
     exon            258..324
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            325..359
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            360..485
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            486..549
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            550..631
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            632..730
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
     exon            731..921
                     /gene="Gm10230"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggaatctc tgctgacaac ggttttttac cattgaggag ttgagcacgg aagggtgcag
       61 ttgtgaaggt gttcacctct gagataacct ttaagtgata atcggctctg ctcagggttg
      121 ttggacagtt aatcgagaca actgagcgct taagagaaaa atgtctatta agaaactgtg
      181 ggtgatacca aaggatggtt acttattact tcttgactat gattcagatg aagaagaaga
      241 gcaggctcat tctgaagtaa agaggccagc atttggcaaa catgagaata tgccgcctca
      301 cgtagaagca gatgaagata taagagatga acaagacagt atgttggata aatctggaga
      361 aaacgtaagt ttctcagagg aatggcagcg ttttgcacgt tctgtagaga caccaatgga
      421 aaactggaat ttgttaagtg gtgaacagca agttaggaat gcttcagaat tggaccttat
      481 ggaagtacag aatccagtaa ctcatgatga tgggaatgca aatcctgaag aagtagttgg
      541 agatacacga aagaagatca acaacaaatt gtgtgagcag aagtttgata tggatataca
      601 gaaattcaat gaagaacaag aaaaatcagt gaacaattat caaaaagaac aacaagcatt
      661 aaaactgtcc gaatgtagtc agagtccgac catggaagca attgaagaca tgcatgagaa
      721 gtccatggag ggtttgatga acatggagac caacaactac gatatgcttt ttgatgtaga
      781 tggtgaagag acattatgaa gcatactctg aagtactctt ctcctttccc atcttcagac
      841 taatgaagca tacatatttc tcacttgctg gtacatttgt aacctaataa aaaattcact
      901 aacatttttg tctcctatga a
//
