LOCUS       NM_001145060            2001 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus glycine-N-acyltransferase-like 3 (Glyatl3), mRNA.
ACCESSION   NM_001145060 XM_006524587 XM_487484 XM_909929
VERSION     NM_001145060.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Jeffries,K.A., Dempsey,D.R., Farrell,E.K., Anderson,R.L.,
            Garbade,G.J., Gurina,T.S., Gruhonjic,I., Gunderson,C.A. and
            Merkler,D.J.
  TITLE     Glycine N-acyltransferase-like 3 is responsible for long-chain
            N-acylglycine formation in N18TG2 cells
  JOURNAL   J Lipid Res 57 (5), 781-790 (2016)
   PUBMED   27016726
  REMARK    GeneRIF: Knockdown of GLYATL3 in the mouse neuroblastoma cells
            resulted in a decrease in the levels of the N-acylglycines and the
            primary fatty acid amides.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC121932.2.
            
            On or before Oct 20, 2022 this sequence version replaced
            XM_006524587.4, NM_001145060.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164137
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-68                AC121932.2         34757-34824
            69-173              AC121932.2         38958-39062
            174-281             AC121932.2         40565-40672
            282-408             AC121932.2         42160-42286
            409-541             AC121932.2         43174-43306
            542-2001            AC121932.2         48168-49627
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 19.55 cM"
     gene            1..2001
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /note="glycine-N-acyltransferase-like 3"
                     /db_xref="GeneID:435528"
                     /db_xref="MGI:MGI:3647683"
     exon            1..68
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /inference="alignment:Splign:2.1.0"
     exon            69..173
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..968
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /EC_number="2.3.1.13"
                     /note="glycine N-acyltransferase-like protein 3;
                     acyl-CoA:glycine-N-acyltransferase-like protein 3"
                     /codon_start=1
                     /product="glycine-N-acyltransferase-like protein 3"
                     /protein_id="NP_001138532.1"
                     /db_xref="CCDS:CCDS50111.1"
                     /db_xref="GeneID:435528"
                     /db_xref="MGI:MGI:3647683"
                     /translation="MLVLKCSTKLFILENMLKSHFPESLKVYGAVMNINRGNPFQKEV
                     VLDSWPNFKVIITRREREAETDNLDHYTNAYAVFYKDIRAYQQLLEEHDVINWDQVFQ
                     IQGLQSELYAASKAVAKARLLDLDINLASFKAVHFSPVSSVPDHSFLTGPTPRLTYLS
                     VSDADLLNRTWSRGGNQQCLRYLANLIACFPSVCVRDEKGNPVSWGITDQFATMCHGY
                     TLPDHRRKGYSRLVALTLARKLQSRGFPSQGNVLDDNLASINLLKSVQAEFLPCRFHR
                     LILTPAAFSRQAHL"
     exon            174..281
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /inference="alignment:Splign:2.1.0"
     exon            282..408
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /inference="alignment:Splign:2.1.0"
     exon            409..541
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /inference="alignment:Splign:2.1.0"
     exon            542..2001
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1980..1985
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /note="hexamer: ATTAAA"
     polyA_site      2001
                     /gene="Glyatl3"
                     /gene_synonym="EG435528; Gm5683"
                     /note="major polyA site"
ORIGIN      
        1 acacagaagg agctctgcat ggatacgcag ctataatacc tgtttctgac tgatctctca
       61 acagcaaggt gcagaggtat ataactgtgg agacaatgtt ggtgctaaag tgctccacca
      121 aattattcat actggagaac atgttgaaga gtcactttcc tgaatcactc aaggtttatg
      181 gagcagtgat gaacataaat cgtggaaatc cctttcaaaa ggaagtggta ttggattcat
      241 ggccaaactt caaagttatc atcacccggc gagagagaga ggctgagaca gataaccttg
      301 accattacac taatgcatat gctgtattct acaaagatat cagagcttac caacagctat
      361 tggaagaaca tgatgttatt aattgggacc aagtttttca aatacaaggg ttgcaaagtg
      421 aattatatgc tgcttccaaa gccgttgcca aagcaaggct gttagatttg gatataaatt
      481 tggcttcctt caaggctgtc catttttctc ctgtttcatc tgtgccagac cacagtttcc
      541 taaccgggcc aaccccgaga ctgacctacc tgagtgtctc agatgcagat cttctcaacc
      601 ggacttggtc acgaggtggc aaccagcagt gcctgcggta cttggccaat ctcatcgcct
      661 gctttcccag cgtgtgtgtg cgtgatgaga agggaaaccc agtatcctgg ggtatcacag
      721 atcagtttgc cactatgtgt cacggctaca ccctgcctga ccatcgcagg aaaggttaca
      781 gccgactggt ggccctcacg ctggccagga agttgcaaag ccggggattc ccttcccagg
      841 gaaatgtcct ggatgacaac ctggcttcca taaacctgct gaagagtgtc caagctgagt
      901 tcttgccttg tcgtttccac aggcttattc tgacccctgc agctttctca agacaagctc
      961 acctttagct cgaagagatt ccaagaatga tcttactttc ccttaataga aatccctttt
     1021 agctaccagt gaggtgggaa ttaaaccaag agaagcctgt gggattgaaa agggcctgga
     1081 aaagacatgc aagataacca ccccctccac gccccccccc cgcccccgcc aactgtttgc
     1141 atatcagatt tccatcacca agaacttcag gggctgggat tgggggctat gtagctttgt
     1201 ctcagaatag agggtgtaga ttctgctagg agtcactgca gggaagtatt ctttaaaccc
     1261 agcccttgtt gccctagtgt tcaaagaccg catgaaaatg agtattttaa tttggggcct
     1321 ttgacctcct tctccatcct ctccaactat ccatgcaccc cggccagctt cccgctggag
     1381 gttttgtcac ttaacctctc agccatttcc ccttcaatga ctaggtgttg atgcagactg
     1441 tgactttaaa ctacagttct tcccggggag cgttcatttg ttcccacagg ttcctgttta
     1501 tccgagagga aaggtttccg gcacagatgt tccagcacag actcatccct cacagccccc
     1561 cccccccccc actccaccgc cccatccccc accccggatg gaatgagcac ctggtgggaa
     1621 ctgagaattt gcatttccca atttttcctt ctcatttgcc ttggcttcat gaacaactgc
     1681 catcagaagg ccagacctga cccagttcgc tgttccagcc acctggatta caatctgctt
     1741 tttcataaac atctgaaatt cacacaggcg tgtgaacaag gttataaaaa atatcatata
     1801 aaatatatga catatatttt ctataggcat atgtttatga tcctagaaaa tctattacat
     1861 tcaattttaa tcttattaca ttgaagaaat ctgagatcta gagacaataa agacttcaag
     1921 attacattca atatgatcag tactggaaag ccagaacttt tgattttagt tcttaaataa
     1981 ttaaattaat gctttatttc a
//
