LOCUS       NM_177005               1559 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus glycosyltransferase 1 domain containing 1 (Glt1d1),
            mRNA.
ACCESSION   NM_177005
VERSION     NM_177005.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK077577.1 and BY337475.1.
            
            On May 22, 2007 this sequence version replaced NM_177005.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849380,
                              SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-182               AK077577.1         2-183
            183-351             BY337475.1         184-352
            352-1559            AK077577.1         354-1561
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 66.06 cM"
     gene            1..1559
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /note="glycosyltransferase 1 domain containing 1"
                     /db_xref="GeneID:319804"
                     /db_xref="MGI:MGI:2442755"
     exon            1..90
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..1063
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /EC_number="2.4.-.-"
                     /note="glycosyltransferase 1 domain-containing protein 1"
                     /codon_start=1
                     /product="glycosyltransferase 1 domain-containing protein
                     1 precursor"
                     /protein_id="NP_795979.2"
                     /db_xref="CCDS:CCDS51651.1"
                     /db_xref="GeneID:319804"
                     /db_xref="MGI:MGI:2442755"
                     /translation="MRLLFLAVLRPHTGNAVTAGRLRDHLEAAGHMCVLRDAFDFESP
                     SEIANLIMDENLEAALALHLYRGGRLLQGHSIPFGVIFGGTDLNEDANHKEKKEVMGK
                     VLEEARFAVAFTEAMKDTAQVQWPHATGKIFVQSQGIATIPNANFNWNTFLQQSEIDQ
                     SADNLYIFLIICGLRPVKDPLYLVDAFSEWHQETPNVYMVIVGPEVDPVFTREVKERV
                     RRAAGVRLIREMCQEDLHAVVKSCFALVNSSVSEGMSAAILEAMDLEVPVLARNIPGN
                     SAVVEHGVTGLLFSNPQEFIQLAKRLVSDPALEKEIVTNGREYVRTHHSWQVERDTYQ
                     RLIRKLETNLED"
     exon            91..239
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            240..345
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            346..397
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            398..434
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            435..491
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            492..587
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            588..637
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            638..681
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            682..802
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            803..901
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1559
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1462..1467
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /note="hexamer: AACAAA"
     polyA_site      1495
                     /gene="Glt1d1"
                     /gene_synonym="5730455A04Rik"
                     /note="major polyA site"
ORIGIN      
        1 agttcttggc ggtagcgacg acatgcggct cctgttcctg gcagtactga ggcctcacac
       61 tggcaacgcg gtcacagctg ggcgcctacg ggaccaccta gaagctgcag gccacatgtg
      121 tgttctgaga gatgcctttg attttgaaag cccatctgaa attgccaacc tgatcatgga
      181 tgaaaatctg gaagcagcac tagctcttca cctctaccga ggaggcagac ttctgcaagg
      241 tcacagcatt cctttcgggg tcatctttgg tggaactgac ttaaatgaag atgccaatca
      301 caaagaaaaa aaggaagtca tggggaaagt tctggaggaa gccaggtttg ctgtggcttt
      361 caccgaggca atgaaggaca cagctcaggt gcagtggcca catgcaactg ggaagatctt
      421 tgtccagagt caaggaattg caacaatacc aaatgccaac tttaactgga acaccttcct
      481 gcagcaatca gagattgacc aaagcgctga caacctgtac atattcctta taatctgtgg
      541 actcagaccg gtgaaggatc ctctgtacct tgtggatgca ttctcagaat ggcatcaaga
      601 aacacccaat gtttacatgg tgatcgtagg tcctgaggta gatccagtgt ttacaaggga
      661 agtgaaagag cgggtgagga gggctgcagg ggtgcggctg atccgagaga tgtgccagga
      721 agatctgcat gcagtggtga agagctgctt tgcgctggtc aacagctccg tctccgaggg
      781 catgtcagct gccatcttgg aggcaatgga tttggaagtt cccgtgctag ccaggaacat
      841 ccctgggaac tcggctgtgg tagagcacgg agtcacggga ctgctgtttt caaaccctca
      901 ggagttcatt cagttggcaa agagactggt tagcgatccc gcactggaga aggaaatcgt
      961 gaccaacgga agggaatacg tgaggacgca tcattcctgg caggtggaga gagacaccta
     1021 ccagcgcctc atcaggaagc tagagacgaa cttggaggat taaatgatgg aagtccgtgc
     1081 tcaccacatc tgtcccaaca accatcaggt gctcagctcg gggcagatgc caaaagatgg
     1141 gacccagtcc tggaccactg gaatcctaga gtccccagga acacatccaa accccacccc
     1201 accccaagtc tcttcctgtt tggcagacag ttctgctgtg cttacagctc agttctggat
     1261 ggacttatag ctcacttctg aaagtgcttg tgactcagtc ccagaggtgt ttacagatca
     1321 gtcatcagtg ggcttgtagg ctcactgctc agtcccagat gggtttgtag ctctgtgcag
     1381 gagatggagg tgcatctcag gggcctttgg aggactgttt caaggactgc ttttacaacg
     1441 tatggaggct tatttataag caacaaaacc caaaaaggcc aggattgtca atggagtgga
     1501 gctggcagca tttttgatat gatcttgatc aacaagccat catgggacag gggggtggc
//
