LOCUS       NM_026029               2523 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus glyoxalase domain containing 4 (Glod4), transcript
            variant 1, mRNA.
ACCESSION   NM_026029
VERSION     NM_026029.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL591129.24, BY122171.1, BC061012.1, CF950671.1 and AI450701.1.
            
            On Aug 1, 2009 this sequence version replaced NM_026029.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660817.59623.1,
                                           SRR1660815.260370.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2                 AL591129.24        204985-204986       c
            3-147               BY122171.1         3-147
            148-1411            BC061012.1         140-1403
            1412-1859           CF950671.1         282-729
            1860-2282           AL591129.24        181923-182345       c
            2283-2523           AI450701.1         1-241               c
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 45.92 cM"
     gene            1..2523
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /note="glyoxalase domain containing 4"
                     /db_xref="GeneID:67201"
                     /db_xref="MGI:MGI:1914451"
     exon            1..145
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..952
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     glyoxalase domain-containing protein 4"
                     /codon_start=1
                     /product="glyoxalase domain-containing protein 4 isoform
                     1"
                     /protein_id="NP_080305.2"
                     /db_xref="CCDS:CCDS25063.1"
                     /db_xref="GeneID:67201"
                     /db_xref="MGI:MGI:1914451"
                     /translation="MATRRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAA
                     CNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAVSNARK
                     LEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLG
                     MKIYEQDEEKQRALLGYADNQCKLELQGIQGAVDHAAAFGRIAFSCPQKELPDLEDLM
                     KRESHSILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFRELSKMDPKGSKLLD
                     DAMEADKSDEWFATRNKPKASG"
     exon            146..195
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            196..316
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            317..461
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            462..598
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            599..685
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            686..799
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            800..886
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            887..2523
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1155..1160
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1168
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
     polyA_site      1172
                     /gene="Glod4"
                     /gene_synonym="1700082G03Rik; 2700085E05Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggtttggtgg gcggggtgtc cctctgcctg gaactcggtt ttcgtgttgg gagccatggc
       61 cactcgtcga gctctgcact tcgttttcaa agtgaagaac cgcttccaga cagtgcattt
      121 ctttcgagat gtcctgggga tgcaggttct ccgccatgag gaatttgaag aaggctgcaa
      181 agctgcatgc aatgggcctt atgatgggaa gtggagtaaa acaatggtgg gatttgggcc
      241 cgaggatgat cattttgttg cagaattgac atacaattat ggcatcggag actacaagct
      301 tggcaatgac ttcatgggaa tcacgcttgc ttctagccaa gctgtcagca atgccaggaa
      361 gctggagtgg ccactgagta aagttgcaga agggattttt gaaactgaag ccccaggagg
      421 atataagttc tacttacagg atagaagccc atctcagtca gatcctgtat taaaggtgac
      481 tctagcagtg tctgatctcc agaagtcctt gaactactgg tctaatctcc tgggaatgaa
      541 aatttatgag caagatgagg aaaagcaacg agctttgctg ggctacgctg ataaccagtg
      601 taagctagag ctacagggca tccagggtgc agttgatcat gcagcggcct ttggaagaat
      661 tgccttttct tgtcctcaga aagagttgcc agacttagaa gacttgatga aaagggagag
      721 ccactcgatc ctgactccgt tggtgagtct ggacacccca gggaaagcca cagtgcaagt
      781 ggtcatcctg gctgaccctg atggacatga aatttgcttt gttggggatg aagcttttcg
      841 agaactctct aagatggatc caaaaggaag caaattattg gatgatgcaa tggaagcaga
      901 caaaagtgac gagtggtttg ctacgaggaa taaaccaaag gcttcgggtt agtggaagac
      961 acatgaagag cacttacatc tccagtccag tctgttatca gtctggcact tatgttttga
     1021 gaaatgctcc caccacttgg ctgtgtcctg cataggaggt ctgtgcagta gtttcactct
     1081 tcaaagctct gtttttagaa atgaaatatt tttatcactc ttggtagagg caaattccta
     1141 ctgtgtgtaa ttgtattaaa tttggtaaca aatttattgt ccagactgag acaactatat
     1201 ggaatattac tcttggttgg ggctggagga aaatctgatt acctgttaat catgtagata
     1261 ctattgaaac aaatgtcaga atgaagccaa accagctagg catgggggtg cacgccttta
     1321 atcccagcac ttgggataca gagacaggag agtgtctgag ttagaggcca gccaggacta
     1381 tagagaccct gtctcaaaac aaacaaacaa acaaaaaaaa aacaaaagct aaatctactg
     1441 cttagagtac tcatttccag gacccgatgg taagattctg ttctgttatc ttaccacaga
     1501 aggtcttgac gtttagaaac ttttcccatt ggctttctga gacagtctca cctgatagct
     1561 ctgggtaacc tattaattca ccatgtaact caaggcagct tttaacttcg taactggaac
     1621 tcggtaggct agattggtct caaactcaag agaccaaccc acccctgcct cttgctgaga
     1681 tcaaatgcac aggatactgt acccagtggt tttgaatgtt tgtcctgctt cagcctccag
     1741 tgttaggact atagatgtgg gccactattc catgtggtgg attgaacatg gttggcccat
     1801 ggaaagtggc actattggag gtgtggcctt attggaggag gtgtagcatt gttagaggaa
     1861 ctgtgtcact gtggagatct cttatatgtg ctcaagtctg gacaatgtag cagtctcctc
     1921 ctggctggtt ttcgattaag atgtcaaact tttggctcct tcagtaccaa gtccacttgc
     1981 ataatgccat gtttccaacc ataatgataa tggactgacc ttctgaaact gtaagctagg
     2041 cccaattaaa tgccatttta agagttgctg tggggctggc gagatggctc agcaggtaag
     2101 agcacccgac tgctcttcca aaggtcctta gttcaaatcc cagcaaccac gtggtggctc
     2161 acaaccatcc gtaacaagat ctgactccct cttctggtgt gtctgaagac agctacggtg
     2221 tacttacatg taataaataa ataaatctga aaagaacctt aaaaaaaaaa aaaaaaagag
     2281 ttgctgtgat catggtgtct cttcacagca gtagaactcc taaatcagac accaggcttg
     2341 atgtttcaaa gaattttttg gctatgtatg gacagaatcc aactcctagc tggcacatca
     2401 tcacccctca cctaaactct gtaaaaaccc cttgctttag cctgcatgtg tgacttcact
     2461 gatcctgtga ggtcagtgaa cccacccaag agctgcctcc taataaacct gcctttatca
     2521 acc
//
