LOCUS       NM_174960               1363 bp    mRNA    linear   ROD 07-AUG-2024
DEFINITION  Mus musculus GTPase, IMAP family member 9 (Gimap9), transcript
            variant 1, mRNA.
ACCESSION   NM_174960
VERSION     NM_174960.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1363)
  AUTHORS   Rutledge,E.A., Fuller,J.M., Van Yserloo,B., Moralejo,D.H.,
            Ettinger,R.A., Gaur,P., Hoehna,J.L., Peterson,M.R., Jensen,R.,
            Kwitek,A.E. and Lernmark,A.
  TITLE     Sequence variation and expression of the Gimap gene family in the
            BB rat
  JOURNAL   Exp Diabetes Res 2009, 835650 (2009)
   PUBMED   19421422
REFERENCE   2  (bases 1 to 1363)
  AUTHORS   Krucken,J., Schroetel,R.M., Muller,I.U., Saidani,N., Marinovski,P.,
            Benten,W.P., Stamm,O. and Wunderlich,F.
  TITLE     Comparative analysis of the human gimap gene cluster encoding a
            novel GTPase family
  JOURNAL   Gene 341, 291-304 (2004)
   PUBMED   15474311
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AC153894.8.
            
            On Sep 1, 2022 this sequence version replaced NM_174960.2.
            
            Summary: This gene encodes a protein belonging to the GTP-binding
            superfamily and to the immuno-associated nucleotide (IAN) subfamily
            of nucleotide-binding proteins. In humans, the IAN subfamily genes
            are located in a cluster at 7q36.1. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC096680.1, SRR5189682.106007.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               AC153894.8         141133-141237
            106-1363            AC153894.8         142425-143682
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 23.65 cM"
     gene            1..1363
                     /gene="Gimap9"
                     /gene_synonym="A630002K24; IAN-7"
                     /note="GTPase, IMAP family member 9"
                     /db_xref="GeneID:317758"
                     /db_xref="MGI:MGI:3511744"
     exon            1..105
                     /gene="Gimap9"
                     /gene_synonym="A630002K24; IAN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            106..1363
                     /gene="Gimap9"
                     /gene_synonym="A630002K24; IAN-7"
                     /inference="alignment:Splign:2.1.0"
     CDS             145..1020
                     /gene="Gimap9"
                     /gene_synonym="A630002K24; IAN-7"
                     /note="isoform 1 is encoded by transcript variant 1;
                     immune associated nucleotide family member;
                     immune-associated nucleotide-binding protein 7;
                     immunity-associated nucleotide-binding protein 7"
                     /codon_start=1
                     /product="GTPase IMAP family member 9 isoform 1"
                     /protein_id="NP_777620.1"
                     /db_xref="CCDS:CCDS20109.1"
                     /db_xref="GeneID:317758"
                     /db_xref="MGI:MGI:3511744"
                     /translation="MAGQGDTEVRIILVGKTGNGKSATANTILGRRQFDSKICANAVT
                     KTCQRAYREWKGKNLVVVDTPGLFDTKETMKTTCFEISRCVLYSCPGPHAIILVLRLD
                     RYTEEEQKTVALIKGLFGEAALKYMIILFTHKEDLEDQSLDNFVSDAGEKLNNIISQC
                     GKRYLAFNNKAALDEQENQVQQLIELTEKMVAQNGGSYFSDKIYKDIDSRLNHCLEEL
                     KETYAQQLTSEIERIEKEYAAKLEKGKAAQIVFAQRNHDEKLRNLKEKAEETVFMYIF
                     QKIKEILSKLWDELW"
     regulatory      1342..1347
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gimap9"
                     /gene_synonym="A630002K24; IAN-7"
                     /note="hexamer: AATAAA"
     polyA_site      1363
                     /gene="Gimap9"
                     /gene_synonym="A630002K24; IAN-7"
                     /note="major polyA site"
ORIGIN      
        1 agggaatgag ggaagtttta cttcatagtt cagtagaaaa cttgaaccag gtcaaattgg
       61 ttccttggag agatcctgaa ctctcattaa ctgttgcaga agaagatctg tgcattcaga
      121 tctttagagt cagcttgcct tgacatggct ggccagggag acactgaagt gaggatcatt
      181 ctggtaggga agactggaaa tgggaagagt gctacagcca acaccatcct cgggagacgt
      241 caatttgatt ctaagatttg tgccaatgct gttaccaaga cctgccagag agcatacagg
      301 gagtggaagg ggaaaaacct tgttgtagtc gacactcctg ggctctttga caccaaggag
      361 accatgaaaa ccacatgttt cgagatcagc cgctgcgttc tctactcctg ccctgggcct
      421 cacgccatta ttctggtttt gcgactggac cgttacactg aagaagagca gaaaacggtc
      481 gctctgatca agggtctttt tggggaggca gccctgaagt acatgatcat cttgtttact
      541 cacaaagaag accttgagga tcagagcctt gataattttg taagtgatgc gggtgaaaag
      601 ctcaataata ttatctccca gtgtgggaag cgttacttgg cctttaataa caaagcagct
      661 ctggatgagc aagaaaatca agtgcagcag ctgatagaac tgacagagaa aatggtggcc
      721 caaaatggcg gatcctactt ttctgacaag atatataagg acatagatag caggctgaac
      781 cattgtctag aggaactgaa ggagacttat gctcagcaac tcactagtga aatcgaaaga
      841 atagaaaagg aatatgctgc taaattagaa aaaggaaagg cggcacaaat tgtttttgca
      901 cagagaaatc atgatgaaaa attaagaaat ttgaaggaaa aggctgaaga gactgtattt
      961 atgtatattt tccaaaagat aaaagaaatt ctttcaaaac tttgggacga gttgtggtaa
     1021 attttattta tttattttta ttaacgacat ttgtttttga caatttcata caagcacaca
     1081 tataatgtgt tctgaatata ttaatgactt gcttggtgct gggagccatg gcctcagcca
     1141 ttgccttgtg gacattttct agcttacata aacaatcctg acagaacatt cgtggtcata
     1201 acaggaagaa tgtgggtaaa gaggacactg tgaccgttgt ttccagaacc tcaagattgc
     1261 cacctgacct tcagagcgat cccagactct tcccccatcc cctgaagcct cctcttgctt
     1321 atgctcatat tgctactcct gaataaaggt tttcagagct tga
//
