LOCUS       XM_011249411            4906 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus guanylate binding protein 4 (Gbp4),
            transcript variant X3, mRNA.
ACCESSION   XM_011249411
VERSION     XM_011249411.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011249411.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4906
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4906
                     /gene="Gbp4"
                     /gene_synonym="GBP-4; Mag-2; Mpa-2; Mpa2"
                     /note="guanylate binding protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 88 long SRA reads, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 12 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:17472"
                     /db_xref="MGI:MGI:97072"
     CDS             500..2395
                     /gene="Gbp4"
                     /gene_synonym="GBP-4; Mag-2; Mpa-2; Mpa2"
                     /codon_start=1
                     /product="guanylate-binding protein 4 isoform X1"
                     /protein_id="XP_011247713.1"
                     /db_xref="GeneID:17472"
                     /db_xref="MGI:MGI:97072"
                     /translation="MTQPQMAPICLVENHNEQLSVNQEAIEILDKISQPVVVVAIVGW
                     SHTGKSYLMNCLAGQNHVSGTLPTSQRFPSGLHRAVSDQGHLDVVHAPPHQARALVLL
                     DTEGLGDVEKGDPKNDLWIFALSVLLSSTFVYNSMNTINHQALEQLHYVTELTELIRA
                     KSSPNPHGIKNSTEFVSFFPDFVWTVRDFMLELKLNGEDITSDEYLENALKLIPGNNP
                     RIQASNSARECIRRFFPNRKCFVFEWPTHDIELIKQLETISEDQLDPTFKESAMAFAS
                     YIFTYAKIKTLREGIKVTGNGLGTLVTTYVDAINSGAVPCLDDAVTTLAQRENSVAVQ
                     KAASHYSEQMAQRLSLPTDTIQELLDVHAACEKEAMAVFMEHSFKDENQQFLKKLVEL
                     LREKNGLFLLKNEEASDKYCQEELDRLSKDLMDNISTFSVPGGHRLYMDMREKIEHDY
                     WQVPRKGVKASEVFQNFLQSQAIIESSILQADTALTAGQKAIAEKHTKKEAAEKEQDL
                     LRQKQKEHQEYMEAQEKRNKENLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREE
                     GYKTQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEKAISSVLSL
                     LRKKDRL"
ORIGIN      
        1 attttattct cttctctggc tgaataatat acaatttggt gtgccatcac attgtggtgg
       61 gaaactgggc ttaatccaca ttgtgggtat tgtgaacaca gctaccatga tcattaaaga
      121 tcaaaggtcc atccaagtcc tttttgctag tttgtgctga aatcaaagaa gagctgttag
      181 atcaaatgta actttccatt gtcttagaaa ccaggattgt ttctcatgag gaaatattct
      241 gtgttcttag ctgcagagta cagacaccgg agttgtttaa attctgggtt acatggattt
      301 gttttcccat tgtgtggtag ctgtcctgat gagtatgaag tgatgccttg tggtttgatt
      361 tggacttcct caatgtttgt cacagggact gaagaattat tgaggaacaa taccatgtag
      421 ctcttaaaat aacctagttt gtgcttaaac tgcaaagatc agcaaaacta agcagattca
      481 tctatgttgg caggttgcta tgacccaacc acaaatggct cccatttgtc ttgtggaaaa
      541 ccacaatgaa cagctgtcag tgaaccagga agccatagag attctggaca agatttctca
      601 gccagtggta gtagtggcta ttgttggatg gtcccataca gggaagtcct atttgatgaa
      661 ctgtttggcg ggacagaatc acgtgagtgg cacgctgcct accagccaaa ggtttccctc
      721 tgggctccac cgtgcagtct cagaccaagg gcatctggat gtggtgcatg ccccacccca
      781 ccaagccaga gcactggtcc tcctggacac cgagggcctg ggcgatgtgg aaaagggtga
      841 tcctaagaac gacttgtgga tctttgccct cagtgtgctt ctgagcagca ccttcgtcta
      901 caacagcatg aacaccatca accaccaagc cctggagcag ctgcattatg tcacagaact
      961 cactgagctg atcagagcaa aatcttcccc aaatccccat ggaataaaga attccacaga
     1021 gtttgtgagt ttctttccag actttgtctg gactgttcgg gatttcatgc tggagctgaa
     1081 gttaaatggg gaagacatca caagtgatga gtacctggag aatgccctga agctgatccc
     1141 aggtaacaat cccagaatcc aagcatccaa ttcggccagg gaatgcatca gacgtttctt
     1201 tcctaatcgg aagtgttttg tctttgaatg gccaactcat gacatagaac tcataaaaca
     1261 acttgagact atttcagaag accaattgga tcctacgttt aaggaaagtg caatggcttt
     1321 tgcttcttat atcttcactt atgccaagat caagaccctc agagagggaa ttaaggtcac
     1381 tgggaatgga ctgggtactc tggtgacaac ctacgtggat gccatcaaca gtggagcagt
     1441 gccttgtctg gatgatgctg tgacaactct ggcccagcgt gagaactcag tagctgtgca
     1501 gaaggcagcc agccactaca gtgagcagat ggcccagcga ctgagccttc ccacagacac
     1561 gatccaggag ctgctggatg tacatgcagc ctgcgagaag gaagccatgg ctgtctttat
     1621 ggagcattcc ttcaaagacg aaaatcagca attcctgaag aagctggtgg aattactacg
     1681 tgagaagaat gggcttttcc tgttgaagaa tgaagaggca tctgataaat actgccagga
     1741 agaactggat cgactttcaa aggatttgat ggacaatatc tcaacatttt ctgttcctgg
     1801 gggacacagg ctctacatgg acatgaggga aaagattgaa catgactact ggcaggttcc
     1861 caggaaaggg gtgaaggcaa gtgaagtctt ccagaacttt ctgcagtcac aggccatcat
     1921 cgagagttcc atcttgcagg cagatacagc cctcactgct gggcagaagg ccattgcaga
     1981 gaagcacacc aagaaggagg cagctgagaa ggagcaggat ctgctaagac agaagcagaa
     2041 ggagcatcag gagtatatgg aggctcaaga gaaaaggaac aaggaaaacc tagagcaact
     2101 gagaaggaag ctggagcagg agagagagca gctcatcaaa gaccataaca tgatgctgga
     2161 gaagctaacg aaggaacaaa agactttccg tgaggaagga tataagacac aagctgagga
     2221 attgcgtcga gagatccatc aactgggaca taacatcaag gaaatgaaac aaaatggtga
     2281 ttcccttgtg gaaagtattt taagaagttg gttttcattt atttcacccc cttcagagtc
     2341 agaaaaggct ataagcagcg ttttatcact ccttaggaaa aaggatagac tgtgatacac
     2401 actttgtgtt attttgaagc tgcctgtttt ccattttcat tctgcacaga agattaaaca
     2461 taaaaagtgc tgattaaagg gcatctgggc cccacagaaa tgagatagaa cagctcttac
     2521 gtgtctccac agacaatgct tgcctttaga gaacacattt tgaaacaatt cctatggagg
     2581 gtatgcattt agtcattaca tatgatcact gctggccaat ttaactgcat atagattcag
     2641 caagaaaaca aggttttctg tactcctatg aggaccatgt aacccaggta gcttctgggg
     2701 ggattgtctc aggttaatat ggtagggaac ccatcctaag tgtgggcagc accattgctg
     2761 tggaccgaaa acacggtaga aagaagaaat caaatggccc taccacttgt ggcttcctga
     2821 ctgtggatgc catacaacaa gccagcctgg acttctctca gaatgcattt tcagccttga
     2881 tgaaatgtat catcatgatt catggaccac aacaaaccct ttattacatt ggttttgtga
     2941 gggcatttcc tcacaacaag aggaaaaatc attgatatca taactgtgag aaacctggaa
     3001 actacttaaa caaccctgag ttagattggg aacaaatttt atatgacttt gttcttgaag
     3061 tactgtatag tcaagaaaca atgtcagtca agctatttgt agaatgatct aaattgagct
     3121 aaaatatatc tttaaaaact aagccaaaca ccatacaact gtgtgattat tattagaaat
     3181 actaccatga cattcaaaca tactagaaca gtaatgaaat gcctttggga agactaataa
     3241 aaagcctgat ctattggctt catcgaggga gaataggttg gagtaaaaag ttgaagagat
     3301 gcatacattc catggcgttc tcagtcttat acatttcttg aagagtgctg ggaaagcgaa
     3361 tttacattac ttttagtgac aataagttaa aactcaccac tgcatgatga aacatctgct
     3421 tctagaaatg tcataagcca ctagaagtca cccaagaaca agacttgagt accaggaagc
     3481 ataacatttg cagcttaatg atgttttcct ttgagttaat gatgttttcc tttgaggctt
     3541 tgctttttta aaaataattt aaataataca ttttatgtca ccaacatatc aaaatattat
     3601 ttccacaggc agttgatatg atttatgcat gacattttta tatcagacct attttatatc
     3661 atatttattt atttgcaaag taatgaggaa cctgtatcaa aagagaaatg atagtattga
     3721 ggataagaga gtccaagagt cacatgggag gtggacagct cagagatggc tctgggtcaa
     3781 gagtgcacaa ttttcatgca gggtagctcg gttcctgggg caggtaacaa ctacctgtaa
     3841 atttaactcc aagggatctg acttagtttt ctgaccccta ctggtcactg gtacttccat
     3901 catatatccc caggttacac atatacatac atacaagtaa aatttaaaca aatacactga
     3961 taaaaatgat agtgtgcctt atgagtaaag agacccaagg acccttatta gtgtgctcat
     4021 gaatataata tatttagagt gtacccaccc ccagctcctc taagtcatcc tcaaattcac
     4081 gtcccaattt catgtctttc cctcctccac ctcttcctct ttcttcttcc tttgaataaa
     4141 ttaatgctgg cctcatgtcc ttgggtatta gacaccatct accagaccat ggataattta
     4201 gtatggccca cacccccata gaaacacact ctccctctcc cagtcaccag atatcaactg
     4261 ctaatagttc ctcagctagg ggtggggtct catgatctca ctgcctcccc ttactggatg
     4321 ttgactagct taatagtgtg tatcttgtgc caacaaccgt atctactgtc atagccccat
     4381 actttccagg aaatattatt ttacaacaac atggtcttat ttttaaaata cttatgttaa
     4441 ttatttcaaa attaaaatat agaaactctt atggtttctg gaatcttgga gaagcctact
     4501 tctctcttaa tgccttgtaa gatgtctagt tcaaaagaat gaactgagta aaggagagat
     4561 tttggtgctg tcttattggg agccattttg tttccttctt tgacagcctg cctgccaggc
     4621 acagtcaagg caggtcaggg tctactcgca gatttcttgt cctactgact catggaacta
     4681 taagaggaaa tacacttgag gctcaatgca aggggatgga agttcaattc atcttgctgg
     4741 ttggaacagg aaatcctctg gataagaaag gatatcctgt gtgtatatca gctattattt
     4801 aagctacctt gtgatattgt ttccacggta ctgagagata taataaagct aagaaaaata
     4861 aacttgaggt tgatgtggta ttcacctgca accttcccaa ttctaa
//
