LOCUS       XM_030252276            3587 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus GTPase activating RANGAP domain-like 3
            (Garnl3), transcript variant X12, mRNA.
ACCESSION   XM_030252276
VERSION     XM_030252276.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030252276.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..3587
                     /gene="Garnl3"
                     /note="GTPase activating RANGAP domain-like 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 12 ESTs, 665 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 19 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:99326"
                     /db_xref="MGI:MGI:2139309"
     CDS             619..3159
                     /gene="Garnl3"
                     /codon_start=1
                     /product="GTPase-activating Rap/Ran-GAP domain-like
                     protein 3 isoform X4"
                     /protein_id="XP_030108136.1"
                     /db_xref="GeneID:99326"
                     /db_xref="MGI:MGI:2139309"
                     /translation="MNLDKFEKGPREIFHPEIQKDLLVLEEQEGSVNFKFGVLFAKDG
                     QLTDDEMFSNEIGSEAFQKFLNLLGDTITLKGWTGYRGGLDTKNNTTGINSVYTVYQG
                     HEVMFHVSTMLPYSKENRQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHI
                     FALVRYDQQNDNYRLKIFSEESVPLFGPPLPSPPVFTDHQEFRDFLLVKLINGEKATL
                     ETPTFAQKRRRTLDMLIRSLYQDLMPDLHKNMLNRRSFSDVLPESPKSARKKEEARQA
                     EFVRIGQALKLKSIVRGDAPSSLAASGMCKKEPWEPQCFCCNFPHEAVCADPWGQALL
                     VSTDAGVLLVDDDLPSVPVFDRTLPVKQIHVLETLDLLVLRADKGKDARLFVFRLSAV
                     QKGLDGRQTGRSRSDCRENKLEKTKGCHLYAINTHHSRELRIVVAIRNKLLLITRKPH
                     NKPSGVPGVSLLSPLSESPVEEFQYIREICLCDSPAVMALVDGPTEESDNLICVAYRH
                     QFDVVNESTGEAFRLHHVEANKVNFVAAIDVYEDGEAGLLLCYNYSCIYKKVCPFNGG
                     SFLLQPSASDFQFCWNQAPYAIVCAFPYLLAFTTDSMEIRLVVNGNLVHTAVVPQLQL
                     VASRSDIYFTAATTVHEGSSGGSSKGASAHTSPQTPPARDTPLFPSSLGEGEIQSKNL
                     YKIPLRNLVGRSIERPLKSPLVSKVITPPTSIGLGVAAIPVTHSLSLSRMEIKEIASR
                     TRRELLGLSDDGGTKTEGAPRAKSKTRKRLEESQGGPKPETVRSASSDRIPSGILESP
                     ASEANPEGHNHWASSEQDAGVDKEGSPGSGSSPFQLMASSEEDIIDLK"
ORIGIN      
        1 gtgctgaggt gaggagggtc agcagagaat ccagcaatcg gagctgtgga gcggcgggcc
       61 gatagagcgc tctgtgctgg agggcacagc acctcagcct ccaggcccac tgatggatcc
      121 actgaccaag gggtcctgtg ggagtcagct ggcacaaacc ctcctctgga aagcgaagtc
      181 atctctctct ttcggcatcc agccccttca gacttggcca acaaaagatc ctgaactaga
      241 gtcccaggtc aacctctcat ctctagtgat gccgatggag ccatccaaag ggcaggaaga
      301 ttccgagtgg agaatggctc tacagatgag agtgcagctg ctctgccagg cacttggcga
      361 aggacagacg tgcacttaga aaacccggag taccacaccc ggtggtattt caagtacttt
      421 ttaggacaag tccatcagaa ttacattgga aatgatgcag agaagagccc cttcttcttg
      481 tctgtcaccc tttctgacca gaataatcag cgtgtccctc agtatcgtgc aattctttgg
      541 cggaaaacag gtacgcaaaa aatatgtctc ccctacagtc ccacaaaaac gctgtctgtg
      601 aagtccatct taagtgccat gaacctggac aagtttgaga aaggacctag ggaaattttt
      661 catcccgaga tacaaaagga cttgctggtt ctggaagagc aggagggctc tgtgaatttc
      721 aaatttgggg ttctttttgc caaagatggg cagctcacag atgacgagat gttcagcaat
      781 gaaattggaa gtgaagcttt tcaaaaattt ttaaatctcc tcggtgacac cattactcta
      841 aagggctgga caggctaccg tggcggtctg gacaccaaaa ataacaccac agggatcaac
      901 tcagtctata ctgtgtacca agggcatgag gtcatgtttc acgtttccac catgttgcca
      961 tattccaaag agaacagaca gcaggtggaa aggaagcgcc acattggaaa cgatattgtc
     1021 accatcgtgt tccaggaagg agaggagtcc tctcccgcct ttaagccttc catgatccgc
     1081 tcccatttta cacatatttt tgccttagtg aggtatgacc agcaaaatga caattacagg
     1141 ctgaaaatat tttcagaaga aagtgtgcca ctttttggcc cacccttgcc atcccctccg
     1201 gtgtttactg accaccagga attcagggac tttttgcttg tgaaattaat taacggtgaa
     1261 aaagccactt tggaaacccc aacttttgcc cagaaacgcc ggcgtactct ggacatgttg
     1321 atccgctcct tataccagga tttgatgccg gatttgcata agaatatgct caatcggcga
     1381 tcttttagtg atgttttacc ggagtcaccc aagtcagcac ggaaaaaaga ggaggcccgg
     1441 caggccgagt ttgtgagaat agggcaggcc ctgaagctca agtccattgt gagaggggac
     1501 gccccatcaa gcttggcagc atcagggatg tgtaaaaaag agccttggga gccccagtgt
     1561 ttctgctgta atttccctca tgaagccgtg tgtgcagatc cctggggcca ggccttgctg
     1621 gtttccacgg atgctggcgt cttgctagtg gacgatgacc tcccatccgt gcccgtgttt
     1681 gacagaactc tacctgtgaa gcagatccac gtgctggaga ccctggacct tctggttctc
     1741 agagcagaca aagggaaaga cgcccgcctc tttgtcttcc ggctcagtgc tgtgcagaaa
     1801 ggccttgatg gcaggcagac tggaaggagc agatctgact gccgagaaaa caagctggag
     1861 aaaaccaaag gatgccacct gtatgctatt aatactcacc acagcagaga gctgagaatc
     1921 gtggttgcaa ttcgcaataa actgcttctc atcacaagga aaccacacaa caagccaagt
     1981 ggggtgccag gtgtctcact cctgtctccc ctgtcggagt ctcctgttga ggaattccag
     2041 tacatcaggg aaatctgcct gtgtgactcc ccagcagtga tggccttagt ggatggacca
     2101 acggaagaga gcgacaacct catctgtgtg gcatatcgcc atcagttcga cgtggtaaac
     2161 gagagcacag gagaagcctt taggctgcac catgtggagg ccaacaaggt taattttgtt
     2221 gcagctattg atgtttatga agatggagaa gccggcctgc tcctgtgcta caactatagt
     2281 tgcatctata aaaaggtttg cccctttaac ggtggctctt ttttgcttca accctcggca
     2341 tcggatttcc agttctgttg gaaccaggct ccatatgcaa ttgtctgcgc cttcccatac
     2401 ctcctggcct ttactaccga ctccatggag atccgcctgg tggtgaatgg gaacctggtc
     2461 cacacggcag ttgtgccaca gctgcagctc gtggcctcca ggtcagatat atacttcaca
     2521 gcagccacga ctgtgcatga aggctcatct ggaggcagct caaagggagc cagtgcccac
     2581 acgtctcctc agacaccacc agcccgggac actccactgt ttccttcttc cctgggggaa
     2641 ggtgaaattc agtctaaaaa tctgtacaag attccactta gaaaccttgt gggcagaagc
     2701 atcgagcgac ctctgaaatc acccttagtc tccaaggtca tcaccccgcc cacctccatc
     2761 ggccttggag tcgctgccat tcctgtcacg cattccttgt ccctctcccg catggaaatt
     2821 aaagagattg caagcaggac ccgcagggaa ctgctaggcc tctctgatga tggtggaacc
     2881 aaaacagagg gagcaccaag ggccaaatca aaaacccgga agcggttgga agaaagccaa
     2941 ggaggcccca agccagagac tgtgaggtca gctagtagtg acaggatccc atcaggaatt
     3001 ttggaaagtc cggcatcaga agccaatccc gagggccaca accactgggc aagttctgag
     3061 caggacgctg gggtggataa agagggcagc ccgggctcag gcagcagccc cttccagctc
     3121 atggcctcct cagaggaaga catcattgac ttgaaataga gtctatgccc tattggccat
     3181 ccttagtttt cttacgcaaa tttatactgt tcaagcagct ccaacgtcca gtctcaacac
     3241 agcgcgcctt cggccaggca gcgatccacg gaccaaacct cctgcgccct cagccggtgg
     3301 gtcacttctc cagtgtccag tgccatcttt ctcgaccctg tttctttcca ttcaagaacc
     3361 gtcggtcccc ttgtaataaa ggtggtagat ttcattaagg ttttagatca aaactttgaa
     3421 taaatcaaaa acgttcattc ttattctctg caacccttct catattttat aggtttagat
     3481 ggaaattatt tttttcgaaa attttgactt atgtcatata atgtttcttt tatggaaaaa
     3541 aagatgctgc tttttaattt tactataata taaataagct ttctttc
//
