LOCUS       NM_172672               4818 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Mus musculus glucosidase, alpha; neutral C (Ganc), mRNA.
ACCESSION   NM_172672
VERSION     NM_172672.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4818)
  AUTHORS   Bulusu,V., Prior,N., Snaebjornsson,M.T., Kuehne,A., Sonnen,K.F.,
            Kress,J., Stein,F., Schultz,C., Sauer,U. and Aulehla,A.
  TITLE     Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to
            Mouse Embryo Mesoderm Development
  JOURNAL   Dev Cell 40 (4), 331-341 (2017)
   PUBMED   28245920
REFERENCE   2  (bases 1 to 4818)
  AUTHORS   Kawabata,Y., Hata,S., Ono,Y., Ito,Y., Suzuki,K., Abe,K. and
            Sorimachi,H.
  TITLE     Newly identified exons encoding novel variants of p94/calpain 3 are
            expressed ubiquitously and overlap the alpha-glucosidase C gene
  JOURNAL   FEBS Lett 555 (3), 623-630 (2003)
   PUBMED   14675785
  REMARK    Erratum:[FEBS Lett. 2004 Jan 16;557(1-3):293]
REFERENCE   3  (bases 1 to 4818)
  AUTHORS   Yasue,M., Serikawa,T. and Yamada,J.
  TITLE     Chromosomal assignments of 23 biochemical loci of the rat by using
            rat x mouse somatic cell hybrids
  JOURNAL   Cytogenet Cell Genet 57 (2-3), 142-148 (1991)
   PUBMED   1914521
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK036238.1, AK076333.1 and BC079548.1.
            
            On Feb 6, 2007 this sequence version replaced NM_172672.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849375,
                              SAMN00849380 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1464              AK036238.1         2-1465
            1465-2035           AK076333.1         409-979
            2036-4818           BC079548.1         1498-4280
FEATURES             Location/Qualifiers
     source          1..4818
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 60.31 cM"
     gene            1..4818
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /note="glucosidase, alpha; neutral C"
                     /db_xref="GeneID:76051"
                     /db_xref="MGI:MGI:1923301"
     exon            1..1164
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     CDS             1136..3877
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /EC_number="3.2.1.20"
                     /codon_start=1
                     /product="neutral alpha-glucosidase C"
                     /protein_id="NP_766260.2"
                     /db_xref="CCDS:CCDS38211.1"
                     /db_xref="GeneID:76051"
                     /db_xref="MGI:MGI:1923301"
                     /translation="MEAAEKEEISVEDEAVDKTIFKDCGKIAFYRRQKQQLTKTTTYQ
                     ALLGSVDTEQDSTRFQIISEATKIPLVAEVYGIEKDIFRLKINEETPLKPRYEVPDVI
                     NSKLGTVRLVCSGDTGSLILTNRKGDLKCHVSANPFKIDLLSKNEAVISINSLGQLYF
                     EHLQVPHKQRATKGNGQNTPAATSQENQEDLGLWEEKFGKFVDVKANGPSSVGLDFSL
                     HGFEHLYGIPQHAESHQLKNTRDGDAYRLYNLDVYGYQVHDKMGIYGSVPYLLAHKQG
                     RTVGIFWLNASETLVEINTEPAVEYTLTQMGPAAAKQKVRCRTDVHWMSESGIIDVFL
                     LTGPTPADVFKQYSYITGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYD
                     VMWLDIEHTEDKKYFTWDKKRFANPKRMQELLRSKKRKLVVISDPHIKVDPDYTVYAQ
                     AKEQGFFVKNPEGGDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLW
                     NDMNEPSVFRGPELTMHKSAVHYGDWEHRELHNIYGFYQQMATAEGLIQRSKGKERPF
                     VLSRSFFAGSQKYGAVWTGDNKAEWSYLKISIPMLLTLSVSGISFCGADVGGFIGNPE
                     AELLVRWYQAGAYQPFFRGHATMNTKRREPWLFGEEYTQLIREAIRQRYALLPYLYSL
                     FYHTHVSSQPVMRPLWVEYPDDLETFAVEDEYMLGSALLVHPVTDPQTATIDVFLPGS
                     DEVWYDSKTFAYWKGGCTVKIPVTLDTIPVFQRGGSVVPVKTTVGTSTGWMADSPYEL
                     RVALSTQGSAVGELYLDDGHSFQYLHQNQFLYRKFLFCSSVLTNRCANEKGHYPSKCI
                     VEQILVLGLKKKPSSVTTHLSDGRAQPAAFTYCAETSALRLEKLSLRIGEDWEVRVG"
     exon            1165..1227
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1228..1336
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1337..1464
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1465..1644
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1645..1690
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1691..1757
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1758..1854
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            1855..2035
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2036..2189
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2190..2425
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2426..2552
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2553..2632
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2633..2776
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2777..2873
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2874..2975
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            2976..3219
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3220..3284
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3285..3361
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3362..3436
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3437..3550
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3551..3663
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3664..3767
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
     exon            3768..4818
                     /gene="Ganc"
                     /gene_synonym="5830445O15Rik; 9330160A12; mFLJ00088"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacactcacc gacggcatcg gaatgtgcca cttcgatcta tctgcagcaa acacgggtgc
       61 cggacctgca ccaagaaacg ataatgggaa cggctgcgcc cctaaaagaa gaaaaataac
      121 aggagacacc tgaagccacg cagccaccgc catcttcaca gccatgaagc gcctacccaa
      181 agtattgagc cttcttccgg ctaggtagtt ccgccttctt ccggctcgtc ccaccctctt
      241 ccggcgctac tttgtgggcg ggattatccg ggtccttgaa actgtgcttc ttcccacaga
      301 cgctcagagc gccccagaaa ctttgagtct actgcgcagg cgtcctcctg tttccctgcg
      361 atcgtggcct ggaggtgaac tagcagagtt ttgaggtcta gtgcttccct ctgttcttcc
      421 agcccttaaa ggaactcagt gcagcggcca aggctttgct tttcctgctt cttcccgccc
      481 ctcatccttt ccaagtcaag gtcaggcgca ggccagacgt ctgtagaagc gcgcacactg
      541 gatgcatgat tgacatcaag tactgagttc tctggctgtc gagctgtggc aacagagcct
      601 ggaatgtgac ggggctgaag tagaaacgat tcattagctc caaagtccct tttgaccctg
      661 aaagactgtg gggcagctgc agcatagttt gacaggcgac atcagcgtcc agcagtgatc
      721 cagactgtac tccccattcg aaactaaaag tgaggagaga tcaggtcagc tttcggtatt
      781 gtagagtgac agccactaag actgaccctt attggtggtg cttcctgttt ctcacactct
      841 tagattttaa cctctagggc agcgagcaca tctccgccaa taaaagcaaa gttcatcagc
      901 cactctcaac ctagaaatat ttaccaagta ctttatccct gtaaagacgc tggtttacgc
      961 ttgagataat accagatgaa aaaaaattaa gattggcttc tgcccgaagg ggactcttga
     1021 ctgtgatgaa gtacgggtta taatttagca agcctgcttg tcaccgtttt tttaaagatc
     1081 gcctgagact gtggcctgag agttaggagt caggcagagt taacatcctt gtgccatgga
     1141 agcagctgag aaagaggaaa tcagtgttga agatgaagca gtggataaaa ctattttcaa
     1201 agactgtggc aagattgcat tctacaggcg gcagaaacag cagctcacca agactaccac
     1261 ctaccaggct ttgctaggct cagtcgacac agaacaggac agcaccaggt tccaaatcat
     1321 cagtgaagca actaagattc ctctcgtggc tgaagtttat ggtatagaga aagacatttt
     1381 cagacttaag atcaatgaag agactccact gaaaccaagg tatgaagttc ctgacgtcat
     1441 caacagcaag ctaggaactg tcaggctggt ctgctcaggg gacacaggca gcctaatact
     1501 gacaaataga aaaggagatc tgaaatgtca cgtctcagca aacccattca agatcgattt
     1561 gctgtcgaag aacgaggctg tgatcagcat caactccctg ggccagttat actttgagca
     1621 cctacaggtt cctcacaagc agagagctac caaaggaaat gggcaaaata caccagctgc
     1681 cacctctcag gaaaatcaag aggacctggg cctgtgggaa gaaaaatttg gaaaatttgt
     1741 ggatgtcaaa gctaatggcc cttcctctgt tggtttggat ttctctcttc atggatttga
     1801 acatctctat ggtattcctc aacatgcaga gtcacatcaa cttaaaaata ccagagatgg
     1861 agatgcatac cgtctttata atctggacgt ctatggatac caagtgcatg acaaaatggg
     1921 catatatggt tcagtgcctt atctcctggc ccacaaacag ggcaggactg taggcatttt
     1981 ctggctgaat gcttcagaaa cactcgtgga gatcaacaca gagccagcag ttgagtacac
     2041 actgacccag atgggcccag cagctgccaa acaaaaggtc aggtgccgaa ctgatgtgca
     2101 ctggatgtca gagagtggga tcattgacgt ttttctgctg acaggaccta cacctgctga
     2161 cgtcttcaaa cagtactcat atatcacagg cacacaagcc atgccccctc ttttttcctt
     2221 ggggtaccac cagtgtcgct ggaactatga agatgaacag gatgtgaagg cagtagatgc
     2281 agggtttgat gagcatgaca ttccatatga tgtcatgtgg ctggacatag agcacacgga
     2341 ggacaagaag tacttcacct gggacaaaaa gagatttgca aaccccaaaa ggatgcaaga
     2401 gctgctcagg agcaaaaaac gcaagcttgt ggttatcagt gacccccaca tcaaggtgga
     2461 tcctgactac acagtctatg ctcaagccaa agaacagggc ttctttgtga agaatccaga
     2521 gggtggcgac ttcgaaggag tatgttggcc tggtctctcg tcttacctgg atttcaccaa
     2581 ccccaaggtc agagagtggt attccagcct ttttgctttt cctgtttatc agggatctac
     2641 ggacatcctt ttcctatgga atgacatgaa tgagccctca gtcttcagag ggcctgagct
     2701 aaccatgcac aagagtgctg ttcattatgg cgactgggaa cacagagaac ttcacaacat
     2761 ctacggattt tatcagcaaa tggctactgc agaaggattg atacaacgat ctaaggggaa
     2821 ggagaggccc tttgttcttt cacgttcctt ctttgccgga tcacaaaagt atggtgcagt
     2881 gtggacagga gacaacaaag cggaatggag ctatctgaaa atctccatcc cgatgttact
     2941 cactctcagt gtctcgggaa tctccttctg tggagctgat gtgggtggct tcattggcaa
     3001 tcctgaggca gagctgcttg tgcgttggta ccaggctgga gcttaccagc ccttcttccg
     3061 aggccatgcc accatgaaca ccaagcgacg agaaccctgg ctgtttgggg aagaatacac
     3121 tcagctgatc cgggaagcca tcaggcagcg ctacgccctc ctgccctatc tgtattctct
     3181 gttctaccac acgcacgtgt cttctcagcc cgtcatgagg cctctgtggg tcgaatatcc
     3241 tgatgactta gagacttttg ctgtggaaga tgaatacatg ctgggaagcg ctttattggt
     3301 tcatccagtt acagacccac agaccgccac gattgacgtg ttcctgccag ggtcagatga
     3361 ggtctggtac gactctaaga catttgcata ttggaaagga gggtgtactg tgaagattcc
     3421 agtaaccttg gatactatcc cagtgtttca gcgaggtgga agtgtggtac cagtaaagac
     3481 cactgtggga acgtccactg gctggatggc tgactcccct tatgagctcc gggttgccct
     3541 aagcactcag ggttctgctg tgggagagct gtatcttgat gacggccatt cattccagta
     3601 cctccaccag aaccagttct tataccgcaa gttcttattc tgctccagtg ttctgaccaa
     3661 caggtgtgcc aatgagaagg gtcattaccc cagcaagtgc attgtggagc agatcttggt
     3721 cttaggcctt aagaagaagc catcttctgt gactacccac ttgtctgatg gtagagctca
     3781 gcctgcagct tttacatatt gtgccgaaac atctgccctg cgtctggaga agctgtctct
     3841 gcgcattggt gaggactggg aagtccgtgt gggctgatga gcaggcgccc tggtggagta
     3901 cggggagcta cccgaccgct ctaccttctt ggccttctgt ggatctgtgc tgccatctga
     3961 tttgcttccc tggggaaaat gacatttcac ttatctctag tgtactgatg acctgtcaat
     4021 ttcaggtttt aagattttag ccgggtgcca tggcccactc ctgtcatccc agcgttcagg
     4081 aagctgaagc agaaggattg tagactagct taagctatat tgcgagactt tgtctcaaaa
     4141 aaaaaaatca aaaataagat ttcagattat acatttaaag atgtattgtt gacacactct
     4201 gcacaaacac tgacccttct cacagaccct gaaagagctc agggagtggc ctgacatgga
     4261 gcagggctac tcagaggccc atttgtgggg cctgcctcgg cttgtgtagc aagctcactc
     4321 cgactgtagc agcagcagag ttgcccaact caatccccaa gtggatgtca gtgcctggca
     4381 ctccagggtt accttctgtc agcagcagtg tgggtatggc tgcctctgct gcagacactc
     4441 catgggcaag ggctgtggaa agttcttctc ctctgagagt gactccagat cacaaggata
     4501 cgatcctctt tcacgcttct tagattcaaa agtaccaaat cagttttcaa agtcagattt
     4561 actcctttta attgtatttt attaaaaacc atctactaac cgaagaatat ttataaagtg
     4621 agtataataa gctataatta gtgaaaatgg aataaatacc cacatcccac aggtgaactt
     4681 taaaaataga gcacagggct gggactagaa tagcacaggg attggcactt gtcttaggca
     4741 cgaccaataa ccaaaaggag tagtattcca atactctgtc tttaaaaatc aaaatgaatg
     4801 ccaaaaaaaa aaaaaaaa
//
