LOCUS       XM_006504402            3134 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus polypeptide
            N-acetylgalactosaminyltransferase 17 (Galnt17), transcript variant
            X1, mRNA.
ACCESSION   XM_006504402
VERSION     XM_006504402.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006504402.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3134
                     /gene="Galnt17"
                     /gene_synonym="E330012B09Rik; Galnt19; Gcap8; Wbscr17"
                     /note="polypeptide N-acetylgalactosaminyltransferase 17;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 ESTs, 143 long SRA reads, 3 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:212996"
                     /db_xref="MGI:MGI:2137594"
     CDS             225..1049
                     /gene="Galnt17"
                     /gene_synonym="E330012B09Rik; Galnt19; Gcap8; Wbscr17"
                     /codon_start=1
                     /product="polypeptide N-acetylgalactosaminyltransferase 17
                     isoform X1"
                     /protein_id="XP_006504465.1"
                     /db_xref="GeneID:212996"
                     /db_xref="MGI:MGI:2137594"
                     /translation="MIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSM
                     EVLPCSRVAHIERKKKPYNSNIGFYTKRNALRVAEVWMDDYKSHVYIAWNLPLENPGI
                     DIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCLDQGPL
                     ENHTAILYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRCLVDNSKSRLPQLLDCD
                     KVKSSLYKRWNFIQNGAIMNKGTGRCLEVENRGLAGIDLILRSCTGQRWAIKNPIK"
ORIGIN      
        1 ggcaaggagt gatgtttagc ggaacccagg gagggccatg gtgcttacct ctacatcagt
       61 tttgctacag ctctaggata ccacacttct ctgcagtgag accatggaca tcatgttatt
      121 cagatggtct aggatgccgc tggaggagga ttcagagatc tgtgcttgac attattcctc
      181 agtattgagt gtgtggtgct gggtaatggt acaaaacacc agccatgatt ggctgctcat
      241 ttgtggtcaa caggaaattc tttggtgaaa ttggtctgct ggaccctgga atggatgtgt
      301 acggaggaga gaatattgaa cttgggatca aggtatggct ctgtggtggc agcatggagg
      361 tccttccatg ttcaagggtg gcccacattg agcggaagaa gaaaccgtat aacagtaaca
      421 tcggctttta caccaagagg aatgcattgc gagtagccga ggtctggatg gacgactaca
      481 agtcacatgt gtacatagcg tggaatctgc ctctggagaa tccaggcatc gatatcggtg
      541 atgtctcaga aagaaaagca ttaaggaaaa gtttgaaatg taagaatttc cagtggtatt
      601 tggaccatgt ttacccagaa atgagaagat acaacaacac tatcgcctat ggggagcttc
      661 gtaataataa ggccaaggac gtctgtctgg accaggggcc actggaaaac cacacagcaa
      721 tactgtaccc atgccacggt tggggaccac agctcgcccg ctacaccaag gaagggttcc
      781 tgcacttagg tgctctgggg accaccactc tcctccctga tacccgctgc ctggtggaca
      841 actccaagag tcggttgccg cagctcctgg attgtgacaa ggtcaagagc agcttgtaca
      901 agcgttggaa cttcatccag aatggagcca tcatgaataa gggcacaggg cgctgcctag
      961 aggtggagaa ccggggcctg gccggcatcg acctaatcct tcgaagctgt actggacaga
     1021 gatgggcaat caagaatccc atcaagtaga tggacagaag gagggcacat ggagcccaga
     1081 cccagggcag ggcctggcca tcctcagaag cagccacatg gtggagagac agcaggcacc
     1141 cagaggatgc tctgtggacc tctcagggct cctccagagc agccctggat aaagatgtta
     1201 cgtccccctc aggcattctg cctgtgtact ttgaagatct tccccttatt ctcatctggg
     1261 gaccaggggc tacaacttct gggtactaat gggtgaggct gctcatatct ctccacggta
     1321 tcatctccca ccccagcatc agcagctggg ttctggcagg gtccctctcc ctccctccct
     1381 ccctccctcc ctccctccct ccctccctcc ctcccccctc ccttccttcc ttcctctctc
     1441 cctccttccc tccctctctc cctccctccc tccctctcca ctcttttctc tcatcctttg
     1501 ctgcaactac ttgtgtaact caccctggac ctccaagaca tggaggacaa tgagggcttt
     1561 agccacatcc tagctcctcc ctcttggaga aggaagcagt aagactccca agactccatt
     1621 tctccttaag acactttgcc ccagaggcct gtttgtatgc caaggcagca gccactcaga
     1681 ccttctctgc aaggtgactt tgagacaaga gttctggact cctctggatt gttcttgagg
     1741 ttccctgtcc cagtcaccca aagccctaaa tatggacagc atcagcgctt gagcctgtgt
     1801 ctagagggag ctggaagtca gctgctcatg ctggatgctc ctagcacctg gctagtacag
     1861 cagctctgcc tgccaaggac aaggtgccct ggtttcatgg agcagcaagg gtcttccatg
     1921 caggacataa gggctgaaga gtcagcctag tgatgggcac agggccctct gtgacgctta
     1981 ctgctcagct catttcaccc catgctttgc tggctgatgg gggacagaag cggccatttc
     2041 ctcttttaag agtgattgct tctttccaat tgccctctgg ttagggtgca cttataaatc
     2101 agagttaata tatggatgtg tctgcatgca cgggaaagca agagtgtgcc tgcctgagtg
     2161 atgtgtgtgg ctgggtgtat gtttgcgtgc ttgagcgtgc gagtgtgctt gagcagtagt
     2221 ctcgggcttg tagcttcatt gctcagtgga tagggacaag gacgcctaga agaatggggg
     2281 gtgggaggca tgtccctgga tcacgggccc agaggatatg tctgggtctt acatgctagg
     2341 gtaacctttc tctatcccct cctccaatcc actactgtcc ttggccatct cctgcccaga
     2401 gccaaaccct gtaggtgccc agtgtgggat ccagtatctc atttggtggt atctttattg
     2461 gtgatcatct ccttgcccca tctcccctcc ttgtggaata aatatgttag caatcccaca
     2521 aagcaacctt cagcctcacc tgctctttgg ggttttgtat tgtttgcttt tgttgttgtt
     2581 actttgcagt tggggttcaa atcaaactca ggcaccccac ctgggcaaac tacacaccca
     2641 acgacagtag gagaatttct gagacatggc ggagcgtttt ttatttaggt ttaaaggcag
     2701 ttgaagcttg ttttgttttg agacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaagcag
     2761 gttagggaag gaaagggttt acctgactca caattccagg ctgtgatcga ttatttcagg
     2821 gaagttaaag caggaatttg aagcagctgg ttacatttat gtctgcagtc aaagtcagag
     2881 agaaatgaat gcacgtgtgc ttgattttgc tcaactcagc ttctctgcta ttatatagtt
     2941 gaggacctcc tgcctaggga atggtactgc ccacagtggg ttgggtcttc ccaaatcaat
     3001 taacttcatt aagacagtcc tcttagacct tcccaccgta taacccagca tagacaattc
     3061 ctattgtgac tctctttctg ggtgacccta gattgagtca agttgacaat taaagctgag
     3121 catcattgct acca
//
