LOCUS       XM_036162259            2043 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus polypeptide
            N-acetylgalactosaminyltransferase 13 (Galnt13), transcript variant
            X8, mRNA.
ACCESSION   XM_036162259
VERSION     XM_036162259.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2043
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /note="polypeptide N-acetylgalactosaminyltransferase 13;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 1 EST, 62 long SRA reads, 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 2 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
     CDS             250..1965
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /codon_start=1
                     /product="polypeptide N-acetylgalactosaminyltransferase 13
                     isoform X3"
                     /protein_id="XP_036018152.1"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
                     /translation="MRRFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLP
                     ALRAVISRNQEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRL
                     EGCKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERD
                     FLKLTLENYVKTLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWL
                     EPLLARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR
                     RKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLE
                     IVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDY
                     GDVSVRKTLRENLKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKEN
                     EKVGIFNCHGMGGNQVFSYTADKEIRTDDLCLDVSRLSGPVIMLKCHHMRGNQLWEYD
                     AETHTLVHIITQSCLSMGKGEDGSQDLSMETCNDSTFQKWLLRNYTRAEVFRNVFGNL
                     TDYFP"
ORIGIN      
        1 cttctcttct tggtgacggt ttgggacgga cccctttcgg accgcaggag agtccggctg
       61 ggcgccgcaa agtcccgccg acatattttt taggagtttt ttgaagatgg atattttcaa
      121 atcattttga aacagtcaaa caccatatac atgggatgca tcttgctttt gtcctggaga
      181 tcacctctgt ggcttggata tatctcagga acacccgtct tcagtctccg tattgattag
      241 taatcaagca tgaggagatt tgtctactgc aaggtggttc tggccacttc tctgatgtgg
      301 gtgcttgttg atgtcttctt actcctgtac ttcagcgagt gtaacaagtg tgatgacaag
      361 aaggagagat ccctgctgcc tgcgctgagg gctgttattt caagaaacca agaaggtcca
      421 ggagaaatgg gaaaggctgt gcttattcca aaagatgacc aagagaaaat gaaagagttg
      481 tttaaaatca atcagtttaa cctcatggcc agtgacttga tcgcacttaa ccgaagtctg
      541 ccggatgtga gattagaagg atgcaagact aaagtctacc ctgatgaact tccaaacaca
      601 agtgtagtca ttgtgttcca taatgaagct tggagcactc tacttagaac tgtctatagt
      661 gtcataaatc gctccccaca ctacctgctc tctgaggtca tcttggttga tgatgccagt
      721 gaaagagatt ttctcaagtt gacattagag aactacgtga aaactttaga agtgccagtg
      781 aagattatca ggatggaaga gcgctctggg ttaatacgcg cccgtctccg aggagcagca
      841 gcttcaaaag gacaggtcat aacttttctg gatgcacact gcgagtgcac cttaggatgg
      901 ctggagccct tgctggcgag aataaaggaa gacaggaaaa cagttgtgtg cccgatcatt
      961 gatgttatta gtgatgatac gtttgagtac atggctgggt cagacatgac ttatggtggt
     1021 ttcaactgga agctaaattt ccgatggtat cctgtccctc aaagagaaat ggataggaga
     1081 aaaggagaca ggacattacc tgtcaggacc cctactatgg ctggtggcct attttctatt
     1141 gacagaaact actttgaaga gataggaact tacgatgcag gaatggatat ctggggtgga
     1201 gagaatcttg aaatgtcttt taggatctgg caatgtggag gttctttgga gattgtgact
     1261 tgctctcatg tcggtcatgt ttttcgaaag gcaactccat acacattccc tggtggcact
     1321 ggccatgtca ttaacaagaa caacagaaga ctggcagaag tgtggatgga tgaattcaaa
     1381 gatttcttct atatcatatc cccaggtgtt gtcaaagtgg attatggaga tgtgtcagtc
     1441 agaaaaacac tgagggaaaa tctgaagtgt aagccttttt cttggtacct ggaaaacatc
     1501 tatccggact cccagatccc aagacgttat tactcacttg gtgagatacg aaatgttgag
     1561 accaatcaat gcttagataa catgggccgc aaagaaaatg aaaaagtggg tatcttcaac
     1621 tgtcacggca tgggaggtaa ccaggtgttt tcttatactg ctgacaaaga aatccgaact
     1681 gacgacttgt gcctggatgt atccagactc agtggccctg taatcatgct aaaatgccac
     1741 cacatgagag gaaatcagct gtgggaatat gacgctgaga cccacactct tgttcacata
     1801 atcacgcagt cctgcctctc aatgggcaaa ggagaggatg gctctcaaga tctttccatg
     1861 gagacttgta atgatagcac tttccaaaaa tggctactaa gaaactatac aagagcagaa
     1921 gtttttagaa atgtttttgg aaatcttact gattattttc cttaatgact ttgtagagag
     1981 actcactttg agacatgcta acagtaacca atgtcttgat gaaccttctg aagaagacaa
     2041 aat
//
