LOCUS       XM_036162256            2099 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus polypeptide
            N-acetylgalactosaminyltransferase 13 (Galnt13), transcript variant
            X4, mRNA.
ACCESSION   XM_036162256
VERSION     XM_036162256.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2099
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /note="polypeptide N-acetylgalactosaminyltransferase 13;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 2 ESTs, 58 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
     CDS             177..2018
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /codon_start=1
                     /product="polypeptide N-acetylgalactosaminyltransferase 13
                     isoform X1"
                     /protein_id="XP_036018149.1"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
                     /translation="MRRFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLP
                     ALRAVISRNQEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRL
                     EGQYCCGRCEELQTMQQERYARVYISTNFCSSILFWLKCNTELRCKTKVYPDELPNTS
                     VVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTLEVP
                     VKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVC
                     PIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAG
                     GLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATP
                     YTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCK
                     PFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGNQV
                     FSYTADKEIRTDDLCLDVSRLSGPVIMLKCHHMRGNQLWEYDAETHTLVHIITQSCLS
                     MGKGEDGSQDLSMETCNDSTFQKWLLRNYTRAEVFRNVFGNLTDYFP"
ORIGIN      
        1 tctcttcttg gtgacggttt gggacggacc cctttcggac cgcaggagag tccggctggg
       61 cgccgcaaag tcccgccgtg ggatgcatct tgcttttgtc ctggagatca cctctgtggc
      121 ttggatatat ctcaggaaca cccgtcttca gtctccgtat tgattagtaa tcaagcatga
      181 ggagatttgt ctactgcaag gtggttctgg ccacttctct gatgtgggtg cttgttgatg
      241 tcttcttact cctgtacttc agcgagtgta acaagtgtga tgacaagaag gagagatccc
      301 tgctgcctgc gctgagggct gttatttcaa gaaaccaaga aggtccagga gaaatgggaa
      361 aggctgtgct tattccaaaa gatgaccaag agaaaatgaa agagttgttt aaaatcaatc
      421 agtttaacct catggccagt gacttgatcg cacttaaccg aagtctgccg gatgtgagat
      481 tagaaggaca gtactgttgt ggtagatgtg aagaacttca aacaatgcag caagaaagat
      541 atgctagagt ttacatctct accaacttct gctccagtat cctcttctgg ttgaaatgta
      601 acactgagtt gagatgcaag actaaagtct accctgatga acttccaaac acaagtgtag
      661 tcattgtgtt ccataatgaa gcttggagca ctctacttag aactgtctat agtgtcataa
      721 atcgctcccc acactacctg ctctctgagg tcatcttggt tgatgatgcc agtgaaagag
      781 attttctcaa gttgacatta gagaactacg tgaaaacttt agaagtgcca gtgaagatta
      841 tcaggatgga agagcgctct gggttaatac gcgcccgtct ccgaggagca gcagcttcaa
      901 aaggacaggt cataactttt ctggatgcac actgcgagtg caccttagga tggctggagc
      961 ccttgctggc gagaataaag gaagacagga aaacagttgt gtgcccgatc attgatgtta
     1021 ttagtgatga tacgtttgag tacatggctg ggtcagacat gacttatggt ggtttcaact
     1081 ggaagctaaa tttccgatgg tatcctgtcc ctcaaagaga aatggatagg agaaaaggag
     1141 acaggacatt acctgtcagg acccctacta tggctggtgg cctattttct attgacagaa
     1201 actactttga agagatagga acttacgatg caggaatgga tatctggggt ggagagaatc
     1261 ttgaaatgtc ttttaggatc tggcaatgtg gaggttcttt ggagattgtg acttgctctc
     1321 atgtcggtca tgtttttcga aaggcaactc catacacatt ccctggtggc actggccatg
     1381 tcattaacaa gaacaacaga agactggcag aagtgtggat ggatgaattc aaagatttct
     1441 tctatatcat atccccaggt gttgtcaaag tggattatgg agatgtgtca gtcagaaaaa
     1501 cactgaggga aaatctgaag tgtaagcctt tttcttggta cctggaaaac atctatccgg
     1561 actcccagat cccaagacgt tattactcac ttggtgagat acgaaatgtt gagaccaatc
     1621 aatgcttaga taacatgggc cgcaaagaaa atgaaaaagt gggtatcttc aactgtcacg
     1681 gcatgggagg taaccaggtg ttttcttata ctgctgacaa agaaatccga actgacgact
     1741 tgtgcctgga tgtatccaga ctcagtggcc ctgtaatcat gctaaaatgc caccacatga
     1801 gaggaaatca gctgtgggaa tatgacgctg agacccacac tcttgttcac ataatcacgc
     1861 agtcctgcct ctcaatgggc aaaggagagg atggctctca agatctttcc atggagactt
     1921 gtaatgatag cactttccaa aaatggctac taagaaacta tacaagagca gaagttttta
     1981 gaaatgtttt tggaaatctt actgattatt ttccttaatg actttgtaga gagactcact
     2041 ttgagacatg ctaacagtaa ccaatgtctt gatgaacctt ctgaagaaga caaaatggt
//
