LOCUS       XM_036162255            2172 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus polypeptide
            N-acetylgalactosaminyltransferase 13 (Galnt13), transcript variant
            X3, mRNA.
ACCESSION   XM_036162255
VERSION     XM_036162255.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2172
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /note="polypeptide N-acetylgalactosaminyltransferase 13;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 57 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
     CDS             250..2091
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /codon_start=1
                     /product="polypeptide N-acetylgalactosaminyltransferase 13
                     isoform X1"
                     /protein_id="XP_036018148.1"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
                     /translation="MRRFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLP
                     ALRAVISRNQEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRL
                     EGQYCCGRCEELQTMQQERYARVYISTNFCSSILFWLKCNTELRCKTKVYPDELPNTS
                     VVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTLEVP
                     VKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVC
                     PIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAG
                     GLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATP
                     YTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCK
                     PFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGNQV
                     FSYTADKEIRTDDLCLDVSRLSGPVIMLKCHHMRGNQLWEYDAETHTLVHIITQSCLS
                     MGKGEDGSQDLSMETCNDSTFQKWLLRNYTRAEVFRNVFGNLTDYFP"
ORIGIN      
        1 cttctcttct tggtgacggt ttgggacgga cccctttcgg accgcaggag agtccggctg
       61 ggcgccgcaa agtcccgccg acatattttt taggagtttt ttgaagatgg atattttcaa
      121 atcattttga aacagtcaaa caccatatac atgggatgca tcttgctttt gtcctggaga
      181 tcacctctgt ggcttggata tatctcagga acacccgtct tcagtctccg tattgattag
      241 taatcaagca tgaggagatt tgtctactgc aaggtggttc tggccacttc tctgatgtgg
      301 gtgcttgttg atgtcttctt actcctgtac ttcagcgagt gtaacaagtg tgatgacaag
      361 aaggagagat ccctgctgcc tgcgctgagg gctgttattt caagaaacca agaaggtcca
      421 ggagaaatgg gaaaggctgt gcttattcca aaagatgacc aagagaaaat gaaagagttg
      481 tttaaaatca atcagtttaa cctcatggcc agtgacttga tcgcacttaa ccgaagtctg
      541 ccggatgtga gattagaagg acagtactgt tgtggtagat gtgaagaact tcaaacaatg
      601 cagcaagaaa gatatgctag agtttacatc tctaccaact tctgctccag tatcctcttc
      661 tggttgaaat gtaacactga gttgagatgc aagactaaag tctaccctga tgaacttcca
      721 aacacaagtg tagtcattgt gttccataat gaagcttgga gcactctact tagaactgtc
      781 tatagtgtca taaatcgctc cccacactac ctgctctctg aggtcatctt ggttgatgat
      841 gccagtgaaa gagattttct caagttgaca ttagagaact acgtgaaaac tttagaagtg
      901 ccagtgaaga ttatcaggat ggaagagcgc tctgggttaa tacgcgcccg tctccgagga
      961 gcagcagctt caaaaggaca ggtcataact tttctggatg cacactgcga gtgcacctta
     1021 ggatggctgg agcccttgct ggcgagaata aaggaagaca ggaaaacagt tgtgtgcccg
     1081 atcattgatg ttattagtga tgatacgttt gagtacatgg ctgggtcaga catgacttat
     1141 ggtggtttca actggaagct aaatttccga tggtatcctg tccctcaaag agaaatggat
     1201 aggagaaaag gagacaggac attacctgtc aggaccccta ctatggctgg tggcctattt
     1261 tctattgaca gaaactactt tgaagagata ggaacttacg atgcaggaat ggatatctgg
     1321 ggtggagaga atcttgaaat gtcttttagg atctggcaat gtggaggttc tttggagatt
     1381 gtgacttgct ctcatgtcgg tcatgttttt cgaaaggcaa ctccatacac attccctggt
     1441 ggcactggcc atgtcattaa caagaacaac agaagactgg cagaagtgtg gatggatgaa
     1501 ttcaaagatt tcttctatat catatcccca ggtgttgtca aagtggatta tggagatgtg
     1561 tcagtcagaa aaacactgag ggaaaatctg aagtgtaagc ctttttcttg gtacctggaa
     1621 aacatctatc cggactccca gatcccaaga cgttattact cacttggtga gatacgaaat
     1681 gttgagacca atcaatgctt agataacatg ggccgcaaag aaaatgaaaa agtgggtatc
     1741 ttcaactgtc acggcatggg aggtaaccag gtgttttctt atactgctga caaagaaatc
     1801 cgaactgacg acttgtgcct ggatgtatcc agactcagtg gccctgtaat catgctaaaa
     1861 tgccaccaca tgagaggaaa tcagctgtgg gaatatgacg ctgagaccca cactcttgtt
     1921 cacataatca cgcagtcctg cctctcaatg ggcaaaggag aggatggctc tcaagatctt
     1981 tccatggaga cttgtaatga tagcactttc caaaaatggc tactaagaaa ctatacaaga
     2041 gcagaagttt ttagaaatgt ttttggaaat cttactgatt attttcctta atgactttgt
     2101 agagagactc actttgagac atgctaacag taaccaatgt cttgatgaac cttctgaaga
     2161 agacaaaatg gt
//
