LOCUS       XM_036162253            2177 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus polypeptide
            N-acetylgalactosaminyltransferase 13 (Galnt13), transcript variant
            X1, mRNA.
ACCESSION   XM_036162253
VERSION     XM_036162253.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2177
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /note="polypeptide N-acetylgalactosaminyltransferase 13;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 ESTs, 63 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
     CDS             255..2096
                     /gene="Galnt13"
                     /gene_synonym="A230002A12; A230020F20"
                     /codon_start=1
                     /product="polypeptide N-acetylgalactosaminyltransferase 13
                     isoform X1"
                     /protein_id="XP_036018146.1"
                     /db_xref="GeneID:271786"
                     /db_xref="MGI:MGI:2139447"
                     /translation="MRRFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLP
                     ALRAVISRNQEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRL
                     EGQYCCGRCEELQTMQQERYARVYISTNFCSSILFWLKCNTELRCKTKVYPDELPNTS
                     VVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTLEVP
                     VKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVC
                     PIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAG
                     GLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATP
                     YTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCK
                     PFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGNQV
                     FSYTADKEIRTDDLCLDVSRLSGPVIMLKCHHMRGNQLWEYDAETHTLVHIITQSCLS
                     MGKGEDGSQDLSMETCNDSTFQKWLLRNYTRAEVFRNVFGNLTDYFP"
ORIGIN      
        1 cggccactgg tcgggctgga tccaggcagc atcccgtgcg cggaccgccg agctctctcc
       61 gcgggatcga cagccaccgt agcagacata ttttttagga gttttttgaa gatggatatt
      121 ttcaaatcat tttgaaacag tcaaacacca tatacatggg atgcatcttg cttttgtcct
      181 ggagatcacc tctgtggctt ggatatatct caggaacacc cgtcttcagt ctccgtattg
      241 attagtaatc aagcatgagg agatttgtct actgcaaggt ggttctggcc acttctctga
      301 tgtgggtgct tgttgatgtc ttcttactcc tgtacttcag cgagtgtaac aagtgtgatg
      361 acaagaagga gagatccctg ctgcctgcgc tgagggctgt tatttcaaga aaccaagaag
      421 gtccaggaga aatgggaaag gctgtgctta ttccaaaaga tgaccaagag aaaatgaaag
      481 agttgtttaa aatcaatcag tttaacctca tggccagtga cttgatcgca cttaaccgaa
      541 gtctgccgga tgtgagatta gaaggacagt actgttgtgg tagatgtgaa gaacttcaaa
      601 caatgcagca agaaagatat gctagagttt acatctctac caacttctgc tccagtatcc
      661 tcttctggtt gaaatgtaac actgagttga gatgcaagac taaagtctac cctgatgaac
      721 ttccaaacac aagtgtagtc attgtgttcc ataatgaagc ttggagcact ctacttagaa
      781 ctgtctatag tgtcataaat cgctccccac actacctgct ctctgaggtc atcttggttg
      841 atgatgccag tgaaagagat tttctcaagt tgacattaga gaactacgtg aaaactttag
      901 aagtgccagt gaagattatc aggatggaag agcgctctgg gttaatacgc gcccgtctcc
      961 gaggagcagc agcttcaaaa ggacaggtca taacttttct ggatgcacac tgcgagtgca
     1021 ccttaggatg gctggagccc ttgctggcga gaataaagga agacaggaaa acagttgtgt
     1081 gcccgatcat tgatgttatt agtgatgata cgtttgagta catggctggg tcagacatga
     1141 cttatggtgg tttcaactgg aagctaaatt tccgatggta tcctgtccct caaagagaaa
     1201 tggataggag aaaaggagac aggacattac ctgtcaggac ccctactatg gctggtggcc
     1261 tattttctat tgacagaaac tactttgaag agataggaac ttacgatgca ggaatggata
     1321 tctggggtgg agagaatctt gaaatgtctt ttaggatctg gcaatgtgga ggttctttgg
     1381 agattgtgac ttgctctcat gtcggtcatg tttttcgaaa ggcaactcca tacacattcc
     1441 ctggtggcac tggccatgtc attaacaaga acaacagaag actggcagaa gtgtggatgg
     1501 atgaattcaa agatttcttc tatatcatat ccccaggtgt tgtcaaagtg gattatggag
     1561 atgtgtcagt cagaaaaaca ctgagggaaa atctgaagtg taagcctttt tcttggtacc
     1621 tggaaaacat ctatccggac tcccagatcc caagacgtta ttactcactt ggtgagatac
     1681 gaaatgttga gaccaatcaa tgcttagata acatgggccg caaagaaaat gaaaaagtgg
     1741 gtatcttcaa ctgtcacggc atgggaggta accaggtgtt ttcttatact gctgacaaag
     1801 aaatccgaac tgacgacttg tgcctggatg tatccagact cagtggccct gtaatcatgc
     1861 taaaatgcca ccacatgaga ggaaatcagc tgtgggaata tgacgctgag acccacactc
     1921 ttgttcacat aatcacgcag tcctgcctct caatgggcaa aggagaggat ggctctcaag
     1981 atctttccat ggagacttgt aatgatagca ctttccaaaa atggctacta agaaactata
     2041 caagagcaga agtttttaga aatgtttttg gaaatcttac tgattatttt ccttaatgac
     2101 tttgtagaga gactcacttt gagacatgct aacagtaacc aatgtcttga tgaaccttct
     2161 gaagaagaca aaatggt
//
