LOCUS       NM_001347507            1873 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus galactose-3-O-sulfotransferase 4 (Gal3st4), transcript
            variant 2, mRNA.
ACCESSION   NM_001347507 XM_006504581
VERSION     NM_001347507.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Karner CM, Long F, Solnica-Krezel L, Monk KR and Gray RS.
  TITLE     Gpr126/Adgrg6 deletion in cartilage models idiopathic scoliosis and
            pectus excavatum in mice
  JOURNAL   Hum Mol Genet 24 (15), 4365-4373 (2015)
   PUBMED   25954032
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159257.2.
            
            On Nov 30, 2016 this sequence version replaced XM_006504581.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK138993.1, ERR3363658.43093.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                AC159257.2         179318-179398       c
            82-183              AC159257.2         177865-177966       c
            184-487             AC159257.2         177354-177657       c
            488-1873            AC159257.2         171507-172892       c
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 77.0 cM"
     gene            1..1873
                     /gene="Gal3st4"
                     /gene_synonym="1500031A01Rik"
                     /note="galactose-3-O-sulfotransferase 4"
                     /db_xref="GeneID:330217"
                     /db_xref="MGI:MGI:1916254"
     exon            1..81
                     /gene="Gal3st4"
                     /gene_synonym="1500031A01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..1501
                     /gene="Gal3st4"
                     /gene_synonym="1500031A01Rik"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="galactose-3-O-sulfotransferase 4 isoform 2"
                     /protein_id="NP_001334436.1"
                     /db_xref="CCDS:CCDS84982.1"
                     /db_xref="GeneID:330217"
                     /db_xref="MGI:MGI:1916254"
                     /translation="MAWTMRLWRPRSLGVALGVFMTIGFGLQFLGGSFQRRLPGLQLR
                     QSWVPSLGSTVKSCLPRQRLVFLKTHKSGSSSVLNLLHRYGDQQGLRFALPAHYQFGY
                     PKLFQASKVKGYHPQSADTQKPFHILCHHMRFNLKEVLQVMPSDSFFFSIVRDPAALA
                     RSAFSYYKSVSSAFRKAPSLAAFLSNPQAFYRPGARGNHYARNLLWFDFGLPSPPETK
                     TMKVSPQLPRDPKSLQLHIVPSGASPGTLFRPVTTAADSYKQPASLVSSDFRPSSFIQ
                     WGLAWLDSVFDLVMVAEYFDESLVLLADALCWSLDDVVGFMHNAQAGKKQSLIRTANK
                     TVVTGEDQQLTKQARAWNNLDWALYIHFNRSLWARIEQYGRSRLQRAVAELRARREAL
                     AKRCLVGGEALDPKYIADAKLRPLQFGSAKVLGYVLQSGLNQKDKEECERLATPELQY
                     KDKLDAKQFPPTVSSPLKTSRLLSP"
     exon            82..183
                     /gene="Gal3st4"
                     /gene_synonym="1500031A01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            184..487
                     /gene="Gal3st4"
                     /gene_synonym="1500031A01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            488..1873
                     /gene="Gal3st4"
                     /gene_synonym="1500031A01Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggggcaag ttgatccaag gagccgggcg gtggctgggg agcctgacct ggttttttct
       61 gactgctctc cttatggcct ggaccatgag gctctggagg cctcggagcc tgggggtggc
      121 tctgggagtc ttcatgacca ttggatttgg cctccagttc ctggggggat cattccagag
      181 gagactacct ggactgcagc tccgacagtc ctgggtccct tcactgggat caactgttaa
      241 gtcttgccta ccccgacagc gacttgtgtt cttgaagaca cacaaatctg ggagcagctc
      301 tgtgctcaat ctccttcatc gctatgggga ccagcagggg ctacgttttg ccctgcctgc
      361 ccactaccag tttggctacc caaagctttt ccaggcttct aaggtcaaag gctaccatcc
      421 ccagagtgcg gatactcaga agcctttcca tatcctctgc catcacatga gattcaacct
      481 caaagaggta cttcaggtca tgccttctga tagcttcttc ttttccattg tccgagatcc
      541 agcagctcta gcccgctctg ccttctccta ttacaaatca gtttcatcgg ctttccgaaa
      601 ggcaccgtct ttggccgcct tcctgtccaa tcctcaagcc ttctacagac ccggagcccg
      661 tggcaaccac tacgcccgta acttactatg gtttgacttt ggtttgccct ctcccccaga
      721 gacaaagacc atgaaagtga gtccccagct acccagagac cccaaatctc tccagctaca
      781 tattgtacct tccggtgcta gccctggaac tctcttccgt cctgttacca cagctgctga
      841 tagttacaag cagccagcca gccttgtctc ctcagatttt aggccctcat cctttatcca
      901 atggggtctg gcctggttgg actcagtctt tgacctggtc atggtggccg agtactttga
      961 tgagtcactg gtcctgttgg cagatgccct gtgctggagt ctggacgatg tggtgggctt
     1021 catgcacaat gcccaggctg gaaaaaagca gagtcttatc agaactgcca ataagactgt
     1081 ggtgactggt gaagatcagc agctaaccaa acaggcccga gcttggaata acttggattg
     1141 ggctctttat attcacttca accgtagtct gtgggcgcgg atagaacagt atggcaggag
     1201 tcgactgcaa cgtgctgtgg ctgagctccg ggctcgaaga gaagctctgg ctaaacgttg
     1261 cttggtggga ggtgaggctt tagaccccaa atacatcgct gatgcaaagc tccgtccttt
     1321 acagtttggt tcagctaagg tattgggcta tgtacttcag agtggactaa accagaaaga
     1381 caaagaggaa tgtgaacgct tggctactcc agagctacag tataaggata aacttgatgc
     1441 taagcagttt cctcctacag tctcctcgcc tctcaagacc tcaaggctac tgtccccata
     1501 ggtatcagac tacaaattag gacatatgcg acgggtggag gacctctagg tgcgtatgta
     1561 tttcccttgg aaggaacagg aagtttgctc taagatgaga ctgttgttgt ctggacttcc
     1621 tctagaaatc ccagcagaat ctgttgcctc ccccaacccc taactttgcc acttcaagcc
     1681 tcaagacaga ttcatgtagc agttcctcaa aaccccctgg aggggcaaaa gatgacagcg
     1741 acacagagaa agtttggggc atgatatatg tccatttctc tacgaaatat ttgttatgga
     1801 gctgtgctaa tttcactatc aaaatatttg ttggatgaat aaatgctacg aaacgtttac
     1861 ttatttttta aaa
//
