LOCUS       NM_001024717            2442 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus galactose-3-O-sulfotransferase 3 (Gal3st3), mRNA.
ACCESSION   NM_001024717 XM_619566 XM_905783
VERSION     NM_001024717.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU612752.1 and BC066996.1.
            
            On Dec 10, 2009 this sequence version replaced NM_001024717.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC066996.1, SRR1660815.148628.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                BU612752.1         1-10
            11-2244             BC066996.1         1-2234
            2245-2442           BC066996.1         2236-2433
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 4.29 cM"
     gene            1..2442
                     /gene="Gal3st3"
                     /note="galactose-3-O-sulfotransferase 3"
                     /db_xref="GeneID:545276"
                     /db_xref="MGI:MGI:3617843"
     exon            1..170
                     /gene="Gal3st3"
                     /inference="alignment:Splign:2.1.0"
     exon            171..406
                     /gene="Gal3st3"
                     /inference="alignment:Splign:2.1.0"
     CDS             282..1577
                     /gene="Gal3st3"
                     /note="gal3ST-3; beta-galactose-3-O-sulfotransferase 3;
                     gal-beta-1, 3-GalNAc 3'-sulfotransferase 3"
                     /codon_start=1
                     /product="galactose-3-O-sulfotransferase 3"
                     /protein_id="NP_001019888.1"
                     /db_xref="CCDS:CCDS29455.1"
                     /db_xref="GeneID:545276"
                     /db_xref="MGI:MGI:3617843"
                     /translation="MPPILQRLQQSTKMMSHRKILLLVLGCSTVSLLIHQGSQLSWYP
                     KLFPLSCPPLRESPPRAKHMAVAFLKTHKTAGTTVQNILFRFAERHNLTVALPHPSCE
                     HQFCYPRNFSAHFVHPATRPPHMLASHLRFDRAELERLMPPDTIYVTILREPAAMFES
                     LFSYYNQYCPAFRRVPNASLETFLRAPEAYYRPGEHFAMFAHNTLAYDLGGDNERSPR
                     DDAAYLAGLIRQVEEVFSLVMIAEYFDESLVLLRRLLAWDLDDVLYAKLNARAASSRL
                     ATIPEALARAARTWNALDAGLYDHFNATFWRRVARAGRACVEREARELREARQRLLRR
                     CFGDEPVLRPAAQIRTKQLQPWQPSRKVDIMGYDLPSGGAGPTTEACLKLAMPEVQYS
                     NYLLRKQKRRGGVRSRPESVLDNPPPRPIRALPRIPQGT"
     exon            407..2422
                     /gene="Gal3st3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2403..2408
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gal3st3"
                     /note="hexamer: AATAAA"
     polyA_site      2422
                     /gene="Gal3st3"
                     /note="major polyA site"
ORIGIN      
        1 cggacagact cagacgctgc cacctgatcc catccaggcg cagcaaagca agctatcggc
       61 attctgcgtt cagagccccc gttgccctaa gacccggcag atttcaggac aaggggcaca
      121 gggggagcgg agggtagccc tgacccaagt cggagacaga gcctgcctgc gtttttcagg
      181 aacactggcc ctgctaccag agccacagga acccccatga gtgctggtga aggaagcccg
      241 ggataatgag gccctggctg gtccaggagt gaaccctcac catgccacct atcctccagc
      301 gcttgcagca atccaccaag atgatgagcc acaggaaaat tctgctgttg gtgctagggt
      361 gcagcaccgt aagcctcctc atccaccagg ggtcgcagct cagttggtac cccaagttgt
      421 tccctctgag ctgcccgcct ctgcgagaat cgccacctcg ggccaagcac atggccgtgg
      481 ccttcctgaa gactcacaag acagcaggta ctacggtgca gaacatcctg ttccgcttcg
      541 cagaacgcca caacctcacg gtggccctgc ctcaccctag ctgcgagcac cagttctgtt
      601 acccgcgaaa cttctcggcc cacttcgtgc acccagctac gaggcccccg cacatgctgg
      661 ccagccatct gcgcttcgac cgtgcagaac tcgagcgcct catgcctcca gacacgatct
      721 atgtcaccat cctgcgcgaa cccgcggcca tgttcgagtc gcttttcagc tactacaacc
      781 agtactgccc ggccttcagg cgcgtgccca atgcgtcgct cgagactttc ctgcgcgcac
      841 ccgaggccta ctaccgtcca ggcgagcact tcgccatgtt tgctcacaac acgctggcct
      901 acgaccttgg aggcgacaat gagcgcagcc ctcgtgacga cgcagcctac ctggcgggcc
      961 tcatccgcca ggtggaggag gtcttctcgc tcgtcatgat cgcggagtac ttcgacgagt
     1021 ccctcgtgct gctgcggcgt ctactggcct gggacctgga cgacgtgctc tacgccaagc
     1081 tcaacgcgcg cgctgcctcg tcgcgcctgg ccaccatccc cgaggcgctg gcgcgggccg
     1141 cgcgcacctg gaacgcgctc gatgcgggcc tctacgacca tttcaacgcc accttctggc
     1201 gtcgcgtggc gcgcgcgggc cgcgcatgcg tggagcgcga agcgcgcgag ctgcgcgagg
     1261 cccgccagcg tctgctgcgt cgttgctttg gcgacgagcc ggtgctgcga cccgctgccc
     1321 agattcgtac aaagcagctg cagccgtggc agcctagccg caaagtggac atcatgggct
     1381 atgatctgcc tagcggcggc gctggcccta ctacggaggc ttgcctcaag cttgctatgc
     1441 ccgaggtgca gtactcaaac tatctgttga ggaagcaaaa acgccgcggt ggtgtgcggt
     1501 ccaggccaga atctgtcctg gataatcctc cccctcggcc cataagagca ctgccccgta
     1561 tcccccaggg tacctgagat ccgcctgcct ccaggaactc aggtcttgct ccattagggc
     1621 ccttttattc cccacggcct tgagccctgt gtccaaatgg aggtgcgtct gcatctgagc
     1681 ctgccatcct agtgtcgccc gttcgaaccc cactttctgg gatggcattg atgggccacc
     1741 cactccttcc caacttgttg gtgactttga gaagaatcca agggcgttct agtactgccc
     1801 accctgcctt tttctgggga ctgagcaccc cacctgtcat ttgggggtgt tgagcccaca
     1861 cttgtgttta gtggatgacc acaagcccca gagagggact aagtcctggg aaaatgctgt
     1921 acttccagtc agcacctggg cttttgttct tcccagggct gcctaagtcc cctattgtct
     1981 tccaggttct accttcccta cacacaccta agctgctccc agacacacag aaccaagaat
     2041 tcttcggttg ggctttttgt tgtttgacta ctactactac ttcttcttct tcttcttctt
     2101 cttcttcttc ttcttcttct tcttcttctt cttcctctcc tcctcctcct cctcctcctc
     2161 ctccttctct cctcctcctc cccctctccc ttcccctccc ctccctcttt ttcctctttc
     2221 cttttttttt tttttttttt ttttgagaca gggtttctct gtgtagccct ggctgtcctg
     2281 gaactcactc tgtagaccag gctggtctag aactcagaaa tccgcctgcc tctgcctccc
     2341 aagtgctggg attaaaggca tgcaccacca ctgcccggcc tctttcctct ttattctttt
     2401 ttaataaaac aactctaaat taaaaaaaaa aaaaaaaaaa aa
//
