LOCUS       NM_001081190            1456 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus gamma-aminobutyric acid type A receptor subunit rho 3
            (Gabrr3), mRNA.
ACCESSION   NM_001081190 XM_285181
VERSION     NM_001081190.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Rosas-Arellano,A., Tejeda-Guzman,C., Lorca-Ponce,E.,
            Palma-Tirado,L., Mantellero,C.A., Rojas,P., Missirlis,F. and
            Castro,M.A.
  TITLE     Huntington's disease leads to decrease of GABA-A tonic subunits in
            the D2 neostriatal pathway and their relocalization into the
            synaptic cleft
  JOURNAL   Neurobiol Dis 110, 142-153 (2018)
   PUBMED   29196217
REFERENCE   3  (bases 1 to 1456)
  AUTHORS   Guo,Z., Zhao,C., Huang,M., Huang,T., Fan,M., Xie,Z., Chen,Y.,
            Zhao,X., Xia,G., Geng,J. and Cheng,L.
  TITLE     Tlx1/3 and Ptf1a control the expression of distinct sets of
            transmitter and peptide receptor genes in the developing dorsal
            spinal cord
  JOURNAL   J Neurosci 32 (25), 8509-8520 (2012)
   PUBMED   22723691
REFERENCE   4  (bases 1 to 1456)
  AUTHORS   Denter,D.G., Heck,N., Riedemann,T., White,R., Kilb,W. and
            Luhmann,H.J.
  TITLE     GABAC receptors are functionally expressed in the intermediate zone
            and regulate radial migration in the embryonic mouse neocortex
  JOURNAL   Neuroscience 167 (1), 124-134 (2010)
   PUBMED   20123002
REFERENCE   5  (bases 1 to 1456)
  AUTHORS   Rose,M., Dutting,E., Schroder,N., Sticht,H., Brandstatter,J.H. and
            Enz,R.
  TITLE     PNUTS forms a trimeric protein complex with GABA(C) receptors and
            protein phosphatase 1
  JOURNAL   Mol Cell Neurosci 37 (4), 808-819 (2008)
   PUBMED   18325784
REFERENCE   6  (bases 1 to 1456)
  AUTHORS   Lin,Q., Donahue,S.L., Moore-Jarrett,T., Cao,S., Osipovich,A.B. and
            Ruley,H.E.
  TITLE     Mutagenesis of diploid mammalian genes by gene entrapment
  JOURNAL   Nucleic Acids Res 34 (20), e139 (2006)
   PUBMED   17062627
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC154854.2.
            
            On Feb 6, 2007 this sequence version replaced XM_285181.6.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC151105.1, SRR9219383.102677.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849382 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-116               AC154854.2         99899-100014
            117-229             AC154854.2         107770-107882
            230-297             AC154854.2         118936-119003
            298-521             AC154854.2         122454-122677
            522-604             AC154854.2         125960-126042
            605-745             AC154854.2         127075-127215
            746-898             AC154854.2         132993-133145
            899-1095            AC154854.2         140441-140637
            1096-1456           AC154854.2         153896-154256
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 34.83 cM"
     gene            1..1456
                     /gene="Gabrr3"
                     /note="gamma-aminobutyric acid type A receptor subunit rho
                     3"
                     /db_xref="GeneID:328699"
                     /db_xref="MGI:MGI:3588203"
     exon            1..116
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            117..229
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            230..297
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            298..521
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            522..604
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            605..745
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            746..898
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            899..1095
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1096..1456
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtcctgg ctgtttggtt ggtctccttc acctacacct ggatcacact gatgctggat
       61 gcctctgcca tcaagaaacc ccatcagcaa tgtctctctt caccgaaaca aacccgcatc
      121 cgggaaacta ggatgaggaa agacgacctt actaaagtct ggcaccctaa acgtgaacaa
      181 ctgttgcaca ttgaggacca cgatttctcc acgaggcctg ggtttggagg ctcaccagtg
      241 cccgtgggta tagatgtcca ggttgaaagc atcgacagca tttcagaggt caacatggac
      301 tttaccatga cgttttacct caggcactat tggaaggatg agaggctctc ctttcctagc
      361 acgacaaaca aaagcatgac cttcgatcgc agactgctcc aaaagatctg ggtgcctgat
      421 atcttctttg tccattctaa aagatccttc atccacgaca caaccgtgga gaatatcatg
      481 cttcgagtac atcccgatgg gaatgttcta ttcagtctca ggataacagt ttcggccatg
      541 tgcttcatgg acttcagccg ctttcctctg gacactcaga actgttctct agagctggaa
      601 agctatgcct ataatgaaga ggacctaatg ctctactgga aacacggcaa caagtcctta
      661 aacacggaag agcgcatttc cctttctcag ttcttcattg aggagttcag cgcatccagt
      721 ggactggctt tctacagcag cacagggtgg tactatagac tgttcatcaa ctttgtgcta
      781 cggaggcacg ttttcttctt tgtcctgcag acctattttc cagccatgtt gatggtgatg
      841 ctttcctggg tctctttctg gattgaccgg agagctgttc ctgcaagagt ttccctgggg
      901 atcacgacgg tgctcaccat gtccacagtc gtcaccggtg tgagtgcctc catgccccag
      961 gtgtcctatg tcaaggcggt ggatgtgtac atgtgggtca gctccctctt tgtgtttctg
     1021 tccgtcattg agtatgcaac tgtgaattac ctcaccacag tggaggagtg gaaacaactc
     1081 aacaggaggg gaaagatatc tggaatgtac catattgatg ctgttcaagc catggccttc
     1141 gatggttgct accatgacag cgagactgat gtggaccaga cttccttctc tctacactca
     1201 gaagaggact ccatgagtac aaagttcaca ggaagcccct gtgcagattc atctcagata
     1261 aaaaggaaat ccctgggagg aaacgttggt agaatcatcc tggaaaacaa ccacgtcatc
     1321 gatacctatt ctagaattgt attccccacc gtttatataa tatttaattt gttttactgg
     1381 ggtatatatg tgtgaagagg acttctctgc ttgttgactt tttcctttct ttgcagtact
     1441 cagggtgtta cacatg
//
