LOCUS       NM_001162980            3027 bp    mRNA    linear   ROD 03-AUG-2024
DEFINITION  Mus musculus FYN binding protein 2 (Fyb2), transcript variant 2,
            mRNA.
ACCESSION   NM_001162980 XM_161350 XM_915644
VERSION     NM_001162980.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL627186.13 and AL929466.8.
            
            On Mar 18, 2019 this sequence version replaced NM_001162980.1.
            
            Transcript Variant: This variant (2) lacks an alternate in-frame
            exon in the central coding region, compared to variant 1, resulting
            in an isoform (b) that is shorter than isoform a.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK028077.1, BC137723.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               AL627186.13        62913-63042         c
            131-878             AL627186.13        30752-31499         c
            879-1037            AL627186.13        27771-27929         c
            1038-1071           AL627186.13        25717-25750         c
            1072-1172           AL929466.8         4384-4484
            1173-1207           AL929466.8         11654-11688
            1208-1239           AL929466.8         13548-13579
            1240-1342           AL929466.8         14362-14464
            1343-1502           AL929466.8         15596-15755
            1503-1617           AL929466.8         21096-21210
            1618-1658           AL929466.8         21299-21339
            1659-1722           AL929466.8         24724-24787
            1723-1821           AL929466.8         25819-25917
            1822-1853           AL929466.8         27520-27551
            1854-1926           AL929466.8         29271-29343
            1927-2013           AL929466.8         35849-35935
            2014-2107           AL929466.8         38686-38779
            2108-2264           AL929466.8         41008-41164
            2265-2298           AL929466.8         41250-41283
            2299-3027           AL929466.8         41529-42257
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 48.86 cM"
     gene            1..3027
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /note="FYN binding protein 2"
                     /db_xref="GeneID:242594"
                     /db_xref="MGI:MGI:2685466"
     exon            1..130
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     CDS             122..2311
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /note="isoform b is encoded by transcript variant 2;
                     uncharacterized protein C1orf168 homolog;
                     activation-dependent, raft-recruited ADAP-like
                     phosphoprotein"
                     /codon_start=1
                     /product="FYN-binding protein 2 isoform b"
                     /protein_id="NP_001156452.2"
                     /db_xref="CCDS:CCDS51250.2"
                     /db_xref="GeneID:242594"
                     /db_xref="MGI:MGI:2685466"
                     /translation="MEEEGIRNFKELRAKFQKFNAAPLPGPMRFPAGVSRKHDRGSTQ
                     PAQDLANRKCLSSHHHQTPSHSSTGVSQPLKNQTLKSAQGDELQKTSSSSGTPEKSTV
                     CPERDFQKAAVPLDVTKSRAKTSNEEKGMTLSSFRYKLWNWEKVSSQNGEMSPAPLLT
                     NGGIKTFHFEGQKTMGLAQDKPEKSLKATGAQTLPPQSHSMAQRKSPVTSKASSVSLP
                     PHSRKSTKSPATEGSHRSSQCQPVYECELDSLVPEKPQSRHCRLPKTKPLPSIETLGP
                     PPPKPSKPPFVNLYAFHRLPATVTKTPKEETMKEGPLSPDSAELEEAHNYDTTISYLR
                     HSGNSINLCAEGESTEATYEIEIEELQKPWRSFFLPELSPRPKEEENTMEEKESWESE
                     PLEPRKELHPSRPPKVVVYKETPGKTQMAGVHEDRRSVPAGNQEAMTDIMQNRLFPED
                     VTLTRHSQDKSGYVEALEVTKETPSPSTIRSSSSSEKTYDAVECSREDVRKWDFSSSF
                     TSDSEENCEEMYEDIYKAKNDDPKTEVAGRTALRKLQQIFRKENVVFRMKKTKSKEIV
                     SNGFSVSLPDLGPRSQDDSQDGIIYDDVDTREKESNDEDKVKTWKTKFLIPKGKKWGK
                     GSQGSKSFSPRHFFRTKKQKLEKNRMEKEEKLFRERFQYGKEILVINRAVACASNSRN
                     GMFDLPIIPGEQLEVIDTTEQNLVICRNSKGKYGYVLVEHLDFKHQG"
     exon            131..878
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            879..1037
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..1071
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1072..1172
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..1207
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1208..1239
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1240..1342
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1343..1502
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1503..1617
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1618..1658
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1659..1722
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1723..1821
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1822..1853
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1854..1926
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            1927..2013
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            2014..2107
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            2108..2264
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            2265..2298
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
     exon            2299..3027
                     /gene="Fyb2"
                     /gene_synonym="1700024P16Rik; ARAP; C1orf168; Gm620"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctcctccgg gacaggcgaa gtgactgcaa gctggctggc ggaggcgaga gcattgttgg
       61 ccccaggatc caactctggg aagctggcat tgtctcccag tcgctgccta ggaggaccac
      121 aatggaggag gaagggataa gaaacttcaa ggaacttcga gccaaatttc aaaagttcaa
      181 tgctgcacct cttccagggc caatgaggtt tccagctggc gtgtctcgaa agcatgacag
      241 aggttccaca cagccagctc aggatctggc taataggaag tgcctctcat cccaccatca
      301 tcaaaccccg tctcattctt ccactggagt gtcccagcct cttaaaaacc agacattgaa
      361 gtcggctcag ggagatgaac ttcagaagac ttcaagttcc tcgggaactc cagaaaaatc
      421 tacagtgtgt cctgaaaggg atttccagaa agctgccgtg ccattggatg tgactaaatc
      481 aagagctaag acatccaacg aggagaaagg aatgactctc agtagcttca gatacaagct
      541 ttggaactgg gagaaagttt catctcagaa tggtgaaatg tccccagctc cactccttac
      601 caatggcggg attaagacct tccactttga agggcagaaa accatggggc ttgctcagga
      661 caaaccagag aagagcctga aggcaacagg agcccagact cttcctcccc agagccattc
      721 gatggcccag agaaaatcac ccgtgacctc caaagcctcc agtgtatcac ttcctccaca
      781 tagcaggaag agcacaaaaa gccctgccac tgagggaagc cacaggagca gccaatgcca
      841 gcctgtttat gagtgtgaac ttgacagcct ggttccagag aagccacaga gcaggcactg
      901 ccggcttccc aaaacaaaac cactgccttc cattgagacc ctcggtccac ctcctccgaa
      961 gccttcaaag cccccattcg tgaacctcta tgccttccac aggctgccag ctactgtcac
     1021 caagaccccg aaagaagaga ctatgaagga gggtcccctg tctccagata gtgcagagtt
     1081 ggaagaagca cataattatg acacgacaat ttcgtatctg agacactctg gcaactccat
     1141 taacttgtgt gctgagggag aaagtactga agccacttat gaaattgaga ttgaagaact
     1201 ccaaaagcct tggaggagtt ttttccttcc agaactgagt cctagaccta aagaggaaga
     1261 aaacaccatg gaggaaaagg agtcgtggga atcggaacct ctggagccaa ggaaggagtt
     1321 acaccctagt cgtcctccca aggtagttgt ctacaaagag actccaggaa aaacccagat
     1381 ggctggagtc catgaggaca gaaggagtgt gccagctgga aaccaggaag ccatgactga
     1441 catcatgcag aacaggctct tccccgagga tgtgacgctg acgaggcatt cccaggataa
     1501 gagtgggtac gtggaggctt tggaggtgac gaaagaaacg ccaagtccca gcaccattag
     1561 gtcaagctcc tcttcagaga agacttatga tgccgtggag tgctccagag aagacgtacg
     1621 aaagtgggac ttctccagct cattcacctc agacagtgaa gaaaattgtg aagaaatgta
     1681 tgaagatatc tacaaagcaa agaacgatga tcctaaaaca gaagtagctg ggaggacagc
     1741 actgagaaaa ctgcagcaga tcttcaggaa agaaaacgtc gtgttcagaa tgaagaaaac
     1801 caagtcaaaa gaaattgtca gcaatggatt ttccgtgtca ctgcctgact tgggacctag
     1861 gtctcaggat gattctcagg atggtatcat ctacgatgat gtggatacac gtgagaaaga
     1921 atcaaacgat gaggataaag taaaaacttg gaagactaag tttttgatac caaaaggaaa
     1981 aaagtggggg aaaggaagcc agggatccaa aagtttttct cccagacatt tcttcagaac
     2041 taagaagcaa aaattagaaa agaatagaat ggaaaaagaa gaaaaactct tcagagaacg
     2101 atttcagtat ggtaaagaaa tcctggtcat taacagagct gtagcgtgtg ccagtaattc
     2161 acgaaatgga atgtttgatc tgccaataat tcctggcgaa cagctggaag tcatcgacac
     2221 cactgagcaa aacctagtga tctgtcgcaa ttccaaaggc aaatatggat atgtgctcgt
     2281 tgaacatcta gatttcaagc atcagggctg atgtcattaa gaaggtctac gtgatgtctg
     2341 gatgtgtcct aggtctgagt tcggccccac agcactttca gttcctgcct caagatgaga
     2401 tgggtggtgg aaactcagaa gaaaacccct caacaagtca atgttggttt tactccataa
     2461 aagtttgtcc ttcaatgtct atgtccctgc tggttcagga gagtatgaag cagtatgtta
     2521 gtatgtgaac acgtccctaa tgagccatac cccaagttag aaatcttgcc ttctggcacc
     2581 agggagttgg gcagatggta agtgaattct aacgttagta tactgcatgt gtaactgctt
     2641 ggtgcatatc tacatttcac atgaattctg tgtagtaaat aatgtgacca tgttccttta
     2701 aatgacacca ccacctgagc cataatcact tgtttttttt aaccaaagtg aaagacaagt
     2761 actgctaaag ggattctttt ctaaactcaa ccagaactat tgtttagaag tgtttaagta
     2821 tatttaacaa aaatgtgaaa atatataaaa tatatacatg ttgtatcatg ttaaaatagg
     2881 ggaaattatt agtttgtctg tttggctaaa acacttccaa atatatattt catttacatt
     2941 agagtaagta gaaattacag agttgtaaat aagattctgg ttctacccca tatgcactgt
     3001 atgttaataa agtctacata tgctttc
//
