LOCUS       NM_028428               3344 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus fucosyltransferase 11 (Fut11), mRNA.
ACCESSION   NM_028428 XM_203633
VERSION     NM_028428.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3344)
  AUTHORS   Zhang,P., Tang,W., Jiang,Y., Lyu,F., Liu,Z., Xiao,Y. and Wang,D.
  TITLE     Dry and wet experiments reveal the significant role of FUT11 in
            clear cell renal cell carcinoma
  JOURNAL   Int Immunopharmacol 113 (Pt B), 109447 (2022)
   PUBMED   36403525
  REMARK    GeneRIF: Dry and wet experiments reveal the significant role of
            FUT11 in clear cell renal cell carcinoma.
REFERENCE   2  (bases 1 to 3344)
  AUTHORS   Baboval,T. and Smith,F.I.
  TITLE     Comparison of human and mouse Fuc-TX and Fuc-TXI genes, and
            expression studies in the mouse
  JOURNAL   Mamm Genome 13 (9), 538-541 (2002)
   PUBMED   12370785
  REMARK    GeneRIF: amino acid sequence and expression
REFERENCE   3  (bases 1 to 3344)
  AUTHORS   Roos,C., Kolmer,M., Mattila,P. and Renkonen,R.
  TITLE     Composition of Drosophila melanogaster proteome involved in
            fucosylated glycan metabolism
  JOURNAL   J Biol Chem 277 (5), 3168-3175 (2002)
   PUBMED   11698403
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC121599.3.
            
            On Nov 17, 2006 this sequence version replaced NM_028428.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK046461.1, AK030310.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-731               AC121599.3         65553-66283
            732-1357            AC121599.3         66373-66998
            1358-3344           AC121599.3         68796-70782
FEATURES             Location/Qualifiers
     source          1..3344
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 11.53 cM"
     gene            1..3344
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /note="fucosyltransferase 11"
                     /db_xref="GeneID:73068"
                     /db_xref="MGI:MGI:1920318"
     exon            1..731
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1505
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /note="alpha-(1,3)-fucosyltransferase 11; fuc-TXI;
                     fucT-XI; fucosyltransferase XI; galactoside
                     3-L-fucosyltransferase 11"
                     /codon_start=1
                     /product="alpha-(1,3)-fucosyltransferase 11 precursor"
                     /protein_id="NP_082704.1"
                     /db_xref="CCDS:CCDS26851.1"
                     /db_xref="GeneID:73068"
                     /db_xref="MGI:MGI:1920318"
                     /translation="MAARCTEAVLAALGVLSVCSASSSGSEASGEAEREEPWDGAVFR
                     PPAALGAVGIARGPGSPPPGNREAVDLPVLLWWSPGLFPHFPGDSERIQCAHGACVAS
                     RDRRARADPRTRALLFYGTDFRAADAPLPRLAHQSWALLHEESPLNNFLLSHGPGIRL
                     FNLTATFSRHSDYPLPLQWLPGAAYLRRPAPPPRERAEWRRRGYAPLLYLQSHCDVPS
                     DRDRYVRELMRYIPVDSYGKCLQNREPPTVRLQDTATATTEDPELMAFLSRYKFHLAL
                     ENAICNDYMTEKLWRPMHLGAVPVYRGSPSVRDWMPNNHSVILIDDFESPQKLAEFID
                     FLDKNDDEYMKYLAYKQPGGITNQFLLDNLEHREWGVNDPMLPNYLNGFECFVCDHEL
                     ARLNAEKAHASSHGDIPVPEPRIAQSSHMNCPVPTPGFGKVEEIPENDSWKEMWLQDY
                     WQGLYQGEALTAMIHNNETQQRKFWDYVHEIFMKRNKNL"
     exon            732..1357
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1358..3344
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1491..1496
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1514
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /note="major polyA site"
     regulatory      3181..3186
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      3212
                     /gene="Fut11"
                     /gene_synonym="3110009G03Rik"
ORIGIN      
        1 gggtttcgtg ctgtccgagg gggtccggtg tggacatggc tgctcgctgt accgaggcgg
       61 tgctggccgc cctgggggtg ctcagtgtct gttcggccag cagctccggg tccgaggctt
      121 ccggggaggc agagagggag gagccgtggg atggcgcggt tttccggcct cccgccgccc
      181 taggcgccgt ggggatagcg cgcgggcccg ggtccccgcc tccagggaac agagaggcgg
      241 tggacctacc agtgttgctg tggtggagcc caggtctgtt tccgcacttc ccaggtgact
      301 cggagcgcat acagtgtgcg cacggcgcgt gcgtggcgtc ccgggatcga cgggcgcgcg
      361 ccgacccgcg gacgcgcgcg ttgctctttt acggcacgga cttccgcgcg gctgatgcgc
      421 ccctgccgcg cctggcgcac cagagctggg cgctcctgca cgaggagtcg ccgctcaata
      481 acttcctact gagccacggc ccgggcatcc gtctcttcaa tctcaccgcc actttcagcc
      541 gccactcgga ttatccgctg ccgctgcagt ggctgcccgg ggccgcctat ttgcgccggc
      601 ccgcgcctcc gccccgggag cgcgccgagt ggcgtcgccg cggatacgcg ccgttgctct
      661 atttgcagtc ccattgcgat gtgccttccg accgggaccg atacgtacgc gagctcatgc
      721 gctacatccc ggtggattcc tatggcaagt gcctgcagaa ccgcgagccg cccaccgtgc
      781 gattacagga cacagccacg gccaccaccg aggatccaga actcatggcc tttttgtccc
      841 ggtataagtt ccacttagct ctggagaatg ccatctgcaa tgattacatg acagaaaaac
      901 tgtggcgccc catgcatctg ggtgctgtgc ccgtgtatcg tggatcaccc tctgtgaggg
      961 actggatgcc caataatcac tctgtcatcc taattgatga ctttgagtcc cctcaaaagt
     1021 tggcagagtt tattgacttt ctggacaaaa atgatgacga gtatatgaaa tacctggcat
     1081 acaagcagcc tggaggcatc accaaccagt ttcttctgga taacctggag cacagggagt
     1141 ggggagtcaa cgatcccatg ttgcctaatt acctcaatgg ctttgagtgt ttcgtctgtg
     1201 accatgaact ggctcggctg aatgccgaga aagcacatgc atcctctcat ggggacattc
     1261 ctgtccccga gcctcgcatt gcccagtcgt cgcacatgaa ctgtccagtg cctacccctg
     1321 gctttgggaa agtcgaagag attcccgaga atgacagctg gaaggaaatg tggctacaag
     1381 attattggca aggtctctat cagggggaag ctctcactgc catgatccac aacaatgaga
     1441 cacagcagag gaaattttgg gattatgtac atgagatctt catgaaacgg aataaaaatc
     1501 tctaactgcc ttcatgtaag agctgttaac ttggaagact gcgttactgt ggtacctgag
     1561 gcacatccac ctttagtgaa tactctatga ttgatgtttt cactgattct cttgccctgt
     1621 attgggaatt ggaaccttgg gttctgataa taccaggcaa gtacccctag gccctctcca
     1681 cctgaatggt atggagctag tatctcagcc tgtggtaaga tagcttctcc ttaaagagaa
     1741 gcagaagcca gaagcaccca tttgatgact caagtacact tctcatgtct gtagtcattt
     1801 catcatttta aatatggaca ggatggttca ggctatgatc tataaaactt ccgtaattta
     1861 gtacctttaa atagtgtcca ttcctcctct tatcagccgg cacactggtt gggaggcaaa
     1921 gccttatgtg tgggtgtgtt gttctgtttt tctgcctttt tctccctttt gagataggtc
     1981 tcactacatg gcccaaacca acatccaaag cctaggcctc aatgacagta cctgcctcag
     2041 ctgctaagta gcaggggctg caagtataca atactatgct cagctcttca cgttacttta
     2101 aaaaaaaaat acttgcactg tctttaatat cagatgtctt ttaagtagct tgctctttct
     2161 ggctttgggc gatttcccac aaactggaaa gactgacaaa catttacatc attcttactg
     2221 cgtggttttc ttatttaggt atatttggaa ttctttctct tacgaacaga ttgagtagct
     2281 aatattggca tgatatcagt tcagtgtatt gccttgttct agggctggaa agcgccattc
     2341 agtccactac ccacattctc tcatgttctt ccagataacg tttatggtgc ggagtcactg
     2401 gttttgtggt tctgggaagg caagcattct ataaattgag ttatagcttc aactctaata
     2461 ctgaggggtt ttgtgtatat atgtggtttt tttgtgtttg ttttttaata aagacagccc
     2521 gaggccccca gttcaaacag attgaagaaa gcaagggatt taagtcaccc ttaagtgctt
     2581 agcgaaataa aaactttaga tttgaggctg gagagatggc tccactctta agagcactgg
     2641 ctactcttcc agaccaccca agtttgattc ctagcatcca catagagctg acaactgtct
     2701 gtaacttcag atgcaagggt attacatata tatattcaat caaaactccc atataaatcc
     2761 acacaaccaa aagtgtaggt ttgaagatat agatgaactg cctactgctt accaggagct
     2821 ttttctgggg cgatcagaaa gaatgcctta ggccttagag ctatgcttat tgtattgatg
     2881 aattatcact tgagaagtct cttggtttat cagtgcatct gattgcaaac tacagatatc
     2941 tctgaatcta tgtctataca gatagataca tacatgcatg ttagatgctt taagcaacca
     3001 ggcttcatgg ttaatactgt gatatctaag gatgtgacca ggttggaatt acattgctaa
     3061 agttttgttt ttcattgtgt gtgttgctgg cgatggatcc taaggttctg tgcatgctaa
     3121 gaatgtgctc tgtctggctc tgcctctgag ttatgtcccc agatctttat tttgttcttt
     3181 agtaaaaaat gccttcagta gtagcatgga aattgcttaa cctatttttg tttgtttgtt
     3241 ttggattttt ttttttttgg gggcagagaa caaggtgtta aaaaaaaggg ggggggggtg
     3301 tccatgagtg ctaggccaac ttgtgttaca acaacaagac tgtc
//
