LOCUS       NM_001081172            4827 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus FERM and PDZ domain containing 1 (Frmpd1), mRNA.
ACCESSION   NM_001081172 XM_204152
VERSION     NM_001081172.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4827)
  AUTHORS   Campla CK, Bocchero U, Strickland R, Nellissery J, Advani J,
            Ignatova I, Srivastava D, Aponte AM, Wang Y, Gumerson J,
            Martemyanov K, Artemyev NO, Pahlberg J and Swaroop A.
  TITLE     Frmpd1 Facilitates Trafficking of G-Protein Transducin and
            Modulates Synaptic Function in Rod Photoreceptors of Mammalian
            Retina
  JOURNAL   eNeuro 9 (5) (2022)
   PUBMED   36180221
  REMARK    GeneRIF: Frmpd1 Facilitates Trafficking of G-Protein Transducin and
            Modulates Synaptic Function in Rod Photoreceptors of Mammalian
            Retina.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4827)
  AUTHORS   Campla CK, Mast H, Dong L, Lei J, Halford S, Sekaran S and Swaroop
            A.
  TITLE     Targeted deletion of an NRL- and CRX-regulated alternative promoter
            specifically silences FERM and PDZ domain containing 1 (Frmpd1) in
            rod photoreceptors
  JOURNAL   Hum Mol Genet 28 (5), 804-817 (2019)
   PUBMED   30445545
REFERENCE   3  (bases 1 to 4827)
  AUTHORS   Pan Z, Shang Y, Jia M, Zhang L, Xia C, Zhang M, Wang W and Wen W.
  TITLE     Structural and biochemical characterization of the interaction
            between LGN and Frmpd1
  JOURNAL   J Mol Biol 425 (6), 1039-1049 (2013)
   PUBMED   23318951
REFERENCE   4  (bases 1 to 4827)
  AUTHORS   Yuzawa S, Kamakura S, Iwakiri Y, Hayase J and Sumimoto H.
  TITLE     Structural basis for interaction between the conserved cell
            polarity proteins Inscuteable and Leu-Gly-Asn repeat-enriched
            protein (LGN)
  JOURNAL   Proc Natl Acad Sci U S A 108 (48), 19210-19215 (2011)
   PUBMED   22074847
REFERENCE   5  (bases 1 to 4827)
  AUTHORS   Okazaki N, Kikuno R, Ohara R, Inamoto S, Aizawa H, Yuasa S,
            Nakajima D, Nagase T, Ohara O and Koga H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: II. The complete nucleotide sequences of 400 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (1), 35-48 (2003)
   PUBMED   12693553
REFERENCE   6  (bases 1 to 4827)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB660211.1, AK122409.1 and BC031840.1.
            
            [WARNING] On Oct 28, 2023 this sequence was replaced by
            NM_001081172.3.
            
            On Apr 11, 2007 this sequence version replaced NM_001081172.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC158060.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849384, SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-464               BB660211.1         2-465
            465-1457            AK122409.1         91-1083
            1458-4827           BC031840.1         318-3687
FEATURES             Location/Qualifiers
     source          1..4827
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 23.77 cM"
     gene            1..4827
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /note="FERM and PDZ domain containing 1"
                     /db_xref="GeneID:666060"
                     /db_xref="MGI:MGI:2446274"
     exon            1..52
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            53..157
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            158..315
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            316..418
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            419..464
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            465..572
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            573..668
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            669..794
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            795..914
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            915..1051
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1178
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            1179..1274
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            1275..1457
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            1458..1605
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            1606..2421
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
     exon            2422..4812
                     /gene="Frmpd1"
                     /gene_synonym="mKIAA0967"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctactgct cccgccggct ccgcgtgcac gcgggcggcg cctcctcctc aggtaaatgg
       61 aagagctgga cggcagctta tcccagactc ggaaagcaca cagaatagaa cagatggtgg
      121 caaggtggct tcggcgctcc agggacagct cagcccgagc taaagtcgct gcagctgatg
      181 ggccacccgg gaacccagcc caggcactca cgccagtgag gcacacagta acactagaca
      241 aagatgtcct cctccagaac tatggattcc acatttctga gactcttccc ctcacagtgg
      301 tggctgtcac agcaggcggc tctgctcacg gcaagctttt ccctggtgat cagattctcc
      361 aaatgaacaa tgaactggct gaagaccttt cctgtgaacg agcggctgat attctcaggg
      421 aaactgaaga tgctctttca attacagttg tccgctgcac atcgggagtc cccaagtcat
      481 ccttcttgac tgaggagaag cgggcccggc tgaagagcaa ccccgtgaag gtgcactttg
      541 ctgaggaagt actggtcagt gggcacagtc aggggaactc tctgctttgt atgcccaacg
      601 tgctcaaggt gtacctggag aacggacaga ccaaagcttt caagtttgag gcaaacacaa
      661 ctgtgaagga catcatcctc acggtgaagg agaagctgtc catccgaagc atcgagtact
      721 ttgcgctggc ccttgaggaa cagtacagca tctcccgcct acaccttctg catgaggaag
      781 agctggtcca gcaggtggta gaaagggaag aatcccagga ctcccgctgc ctcttcaggg
      841 tgagctttgt gcccaaggac cccctggacc tgctgaaaga agaccctgtg gcatttgaat
      901 atctctacct tcagagctgc agtgatgtac tccaggagcg ctttgctgtg gagatgaagt
      961 gcaactctgc cctccggctt gcagccctgc acatccagga gcggatctat gcctgtgccc
     1021 agccacagaa gatctctttg aagtacatag agaaagactg gggaatagag aattttatat
     1081 ctccaacttt actccgaaat atgaaaggca aagacatcaa gaaagccatt agcttccaca
     1141 tgaaaagaaa ccagaatctg ctagaacccc ggcagaagca acttatttct gctgctcagc
     1201 tacgcttaaa ttatcttcag atccttgggg aactcaagac gtatggtggg aaagtcttca
     1261 atgccacttt gatgttacag gatagagaat cttacattgc cctcctggtt ggggccaagt
     1321 acgggattag ccagatcatc aacagcaagc tcaacatcat atccacgctg gcagagttcg
     1381 ccaacatcag ccgcgtggag ctgacagaag agtctgagaa agtgagcatg gtcaaggtct
     1441 accttcagga cgttaaggtt ctgactttgt tgctggaatc cagcagtgca aaagacctgg
     1501 cctgcttgat cgctgggtac tacaggctgt ttgtggaccc ggccaactcc gtcttccact
     1561 ggtctggaaa cagacggccg acgcaccggg tatccgctga agaaggctac gagtccaggg
     1621 cctgcagtga ctcggaggag tcctctgaag tggactgtgt actggagccc ctttctgacc
     1681 gatgcctggt gaagctgagc ctctgcagac catttgctag agaggagcag ccccctggcg
     1741 acagccccac acctgaggca accagaagag gtccaagcac ctgcggggcc agcagcatga
     1801 cagacagtgc tgaatcggag gcatcggact cagccaacac agagagccga ggctgcagga
     1861 ccagcgggtc cagtgagtcc atggacgccc tggaagagga cgacttagat gcgtgctcct
     1921 ccagcgggac cagcttcttc cactttggcc caccaggctt ctcaaagggc ctcgagacca
     1981 acagccaaga ggaaaacagc agggtcgaga ccagtggctt cctgtgtttg ctggacctgg
     2041 gccagaatgc caaccctcag tgccagaaga tagacggtcc ccagggcctt gcttcggagg
     2101 cctgcagctg gggaccagaa ctgagcatgg gcaggctaga ccccaggctg tatgagggca
     2161 gccggactga ctactataac ctgtgttcca gcatctcccc aggcagccac ctgagtgact
     2221 cgggctcaga gagcacagct tcccggcagg gagctgcacc tccccagtgg tgccagcagg
     2281 gctggatgga ggctcagtct ggctccatgc tggaatccct gggcctgccc gcactgcccc
     2341 cgctggcctt tgagggtggc agctcagatg aggaatacta tgatgcagct gacaaactca
     2401 cgccaccaga cacactctca gggcccagag ctgccgatcc tagtgccatg agattgcaga
     2461 gtcagtctag aacccgtggc tctgaggaaa gcctgcatcc gggcccagag ggaggagagc
     2521 caagcaggca gggaggggtg aagaagtatg ccaagtccct gaggaaaaga aggtccttcc
     2581 tacagacgga tcacacctcc caggtctcct tccccctaga ggcatccgcc tcccaagaga
     2641 acacggatga tgtgtgctac tatgaccgag agccctacct gaccctcact gccccctccc
     2701 caactgtgtc ctccctgcag gacatgcaag gtgagccagg cctcctggag accaaggcct
     2761 tggggttgct ggcttccttg agggagacca agagcacaaa tccagcctcc aggatcatgg
     2821 agatggagcc agagaccatg gaaaccaagt cagtcattga ttcccgagtg tcttctatct
     2881 ctgccattcg cctccgaatt gaccccagca acacagagaa tcctgtcacc acagatggct
     2941 cctcagccag catccctcac agcccccatc actccaaccc aggttcttcc agcccacagg
     3001 ctgctcaagt caggcctttt ccaatcgtat ctccagatca agacccaggt ggcaccaccc
     3061 ccaaagaact cactgcagag cctgaggaca gcaccttccc tctctctagt gatcacccta
     3121 atccagataa cccagggcca caccacgtct ctcaaggaga cacatcagag ctgggagagg
     3181 tgcggtcaga aataggctcg gaatcttttt taataaatca cgtacaagag gttatccccc
     3241 aaatcacagg gcccttgtgt cctggagatg ggcctaccag cggtgaatgt gaagtgaatt
     3301 cggaagagac ggccttggct gcagatgagg tacaaggaca gctgtccttg gacagtgaca
     3361 gggaagttat gcacagaaat ggccctagcc tattccagaa gggatctggg aaggacctgg
     3421 gtgattccaa gggtgacagg ttagataatg tcccacaagc ccttgacgtt agagctccag
     3481 ctggtgaaat aaacagctcc ctctgctcag agcctcctgc aacagggaca ggacagacct
     3541 catctgactc tgaaggggaa aacagagagg cccaggaaca ggagttgttg acagagctgg
     3601 acttggcccc tgatttctta cttccatcag ccttcccgcc agagacaata aaggcagagc
     3661 agcttgaccg cgtgatcggg gaagactccg tccccgtgag cacttctcag caggtctgtg
     3721 tccatacagt accatccctg ccaaagcttt caccgtgtca agaagagcct cgctcggcag
     3781 attcaggcca tggctcacca gcagagagca aaggtgacga cagtcctatc atttgcctac
     3841 cgcctgagag gtcgttcctg tgctttgccc cagagagcca tcccgaaggc tccaccagtc
     3901 tcagcagggt cacctccttc agttttgctg gcataaacga agtggcgccc gcggagattg
     3961 gcatagaaca ctgcagatgt cagttttcct atgccacatg cttccggggc ctgcagcctg
     4021 agacagagga agaagacggg gaccctcaga cacaccctgc tgcccctctt acctccccac
     4081 cctctgcagg aagccaagtg accctgccct ggagggcagc ccgtgcctac agctgcacca
     4141 cacccctatc caggaaaagc cacatctggc cagagttctg ctccagggct ctgagacagc
     4201 tgaaaactac ccccacaaat gcccccgagg gctttgtcca actcacagag agcctgctgg
     4261 agctacagga catcttagaa gcttcctggg gggttggaaa caaacacccc cctgacaagt
     4321 gcaccttgca tttttcagaa agccggagcc ggctatgcat gggctcacag aagctcctag
     4381 ccagctgtca acacgtgatc agaatggacc aatcccccga ggagatgcaa ggtgctgtgc
     4441 gggtcacttt ccagcacctg gtccagctgg ccggcctctg cttccagttc acagactgta
     4501 gccgctgctc cacccggcac agggaagtgg ccgggaacct gagggacgtg gtatacacct
     4561 accaccaatt tgtggaggct gcgaaactca cctgtgagag aggctaccat gacttcagcg
     4621 tgaaactctt ggcccgccag tgcacggccc tcacagccgc tgtattctgt ttgacccaga
     4681 agttccgggc gtccaccgct ctgtgaacag gtcaccgacc caaggcccct ctccaaggag
     4741 cctcttcttg ttcacctgcc ccttccaatg tttactacat agagtattca aataaactgc
     4801 tgcttaatct tgaaaaaaaa aaaaaaa
//
