LOCUS       XM_006505316            7512 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus forkhead box P1 (Foxp1), transcript variant
            X24, mRNA.
ACCESSION   XM_006505316
VERSION     XM_006505316.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006505316.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7512
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..7512
                     /gene="Foxp1"
                     /gene_synonym="3110052D19Rik; 4932443N09Rik"
                     /note="forkhead box P1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 11 mRNAs, 22 ESTs, 4019
                     long SRA reads, 4 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     22 samples with support for all annotated introns"
                     /db_xref="GeneID:108655"
                     /db_xref="MGI:MGI:1914004"
     CDS             647..2764
                     /gene="Foxp1"
                     /gene_synonym="3110052D19Rik; 4932443N09Rik"
                     /codon_start=1
                     /product="forkhead box protein P1 isoform X4"
                     /protein_id="XP_006505379.1"
                     /db_xref="GeneID:108655"
                     /db_xref="MGI:MGI:1914004"
                     /translation="MMQESGSETKSNGSAIQNGSSGGNHLLECGALRDTRSNGEAPAV
                     DLGAADLAHVQQQQQQALQVARQLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
                     QQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLL
                     QQQQALMLQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLAFQQQLLQMQ
                     QLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTSS
                     NHSSLDLTSTCVSSSAPSKSSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGH
                     GVCKWPGCEAVCDDFPAFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQ
                     AMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQGP
                     SVITTTSMHTVGPIRRRYSDKYNVPISSDIAQNQEFYKNAEVRPPFTYASLIRQAILE
                     SPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDE
                     VEFQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPTLG
                     SLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPIHVKEEPLDPEEAEGPLSLVTT
                     ANHSPDFDHDRDYEDEPVNEDME"
ORIGIN      
        1 cgagtcccga gcggaggaat ctattgttat ttattgtgtg gcagctgcac gctgtgctcg
       61 cggcccggcc ctcgcccgcg agtgcgtgtg tgcgcgcgtg tgcgtgtgtg agcggggggc
      121 gcgcgcgggc gggagtgggc gcgcgcgggg aaaggccccg aaaacacctt agtttgcacc
      181 gagagaccat ttgccgcgga ccccgaaact ttgccccagg aggacggcgc gcggcgggcg
      241 agcgggcgag cgggcgaggg gcagcggcgg cggcggcggc ggcggcggcg cggagaagcg
      301 tggggctgcc ggcgcctcct ccccggactc ggtggcgtcc caggagcttc tgctgactct
      361 cctggtttcc gagggaaccc tttcggccat ggtgagggct gcgctccctt ctctgccttg
      421 cggtcaacca tgagcggatg ggtgtgatgc ctgctagcct aaagggctcc ttctgtgtgc
      481 tgcagtcttg tggcgttctg caggccccct gccagtgacc ccaggctttt tatggctgtg
      541 agactcatta aaagctcagg ggtgagacgt gacctttgga ggtgactata actgaagatt
      601 gaattacaga agccaaaaaa ttaaataaat aaaaggtttt tgagtcatga tgcaagaatc
      661 tgggtctgag acaaaaagta acggatcagc catccagaac gggtccagcg gtggcaacca
      721 cttactagag tgcggggcac ttcgtgacac tcggtccaac ggagaggcac cagcggtgga
      781 cctgggggca gccgaccttg cccacgtcca gcagcagcaa cagcaggccc tgcaggtggc
      841 aaggcagctc ctccttcagc agcagcaaca gcagcagcag caacagcagc agcagcagca
      901 gcagcaacag cagcaacagc agcagcaaca acagcagcag cagcaacagc agcagcagca
      961 gcagcaagtt agtggattaa agtctcccaa gaggaatgac aagcaaccag ctcttcaggt
     1021 tcccgtgtca gtggctatga tgacacctca ggttatcact cctcaacaaa tgcagcagat
     1081 cctccagcag caggtgctga gcccccagca gctccaggtt ctcctccagc agcagcaggc
     1141 cctcatgctt caacagcagc ttcaagaatt ttataaaaaa caacaggaac agttgcagct
     1201 tcaacttctc caacagcaac atgctggaaa acagccgaaa gagcagcagc aggtggctac
     1261 ccagcagttg gctttccagc agcagcttct ccagatgcag cagctgcagc agcagcacct
     1321 cttgtctctc cagcgccaag gcctcctaac aattcagccg gggcagcctg cccttcccct
     1381 ccaacccctc gctcaaggca tgattccaac ggaactgcag cagctctgga aagaagtgac
     1441 aagtgcccac actgcagagg aaaccacaag cagcaaccac agcagcctag acctgaccag
     1501 cacatgtgtc tcgtcctcgg caccttccaa gtcctcccta atcatgaacc cgcatgcctc
     1561 taccaatgga cagctctcgg tccacactcc caaaagggaa agcttgtccc acgaggagca
     1621 cccccacagc caccctctct atggacatgg cgtatgcaag tggccaggct gtgaggcggt
     1681 ttgtgacgac ttcccagcct ttctaaaaca tctcaacagt gagcatgcgc tggacgatag
     1741 aagcacagct caatgtagag tacaaatgca ggttgtacag cagttagagc tacagcttgc
     1801 aaaagacaaa gagcgcctgc aagccatgat gacccacctg catgtgaagt ctacagaacc
     1861 caaagctgcc cctcagcccc tgaatctggt atcaagtgtc accctctcca agtctgcctc
     1921 agaggcttct ccacagagct tacctcatac tccaacaacc cccaccgccc ccctgactcc
     1981 tgtcacccaa ggcccctccg tcatcaccac caccagcatg cacacggtgg gacctatccg
     2041 caggcggtac tcagacaaat acaacgtgcc catttcttca gatattgcgc agaaccaaga
     2101 attttataag aacgcggaag ttagaccacc atttacatat gcatctttaa tcaggcaggc
     2161 cattctcgaa tctccagaaa agcagctaac actaaacgaa atctataact ggttcacacg
     2221 aatgtttgct tacttccgac gcaatgcagc cacgtggaag aatgcagtgc gtcataatct
     2281 tagtctccac aagtgttttg tgcgagtaga gaacgttaaa ggggcagtat ggacagtgga
     2341 tgaagtagag ttccaaaaac ggaggccaca aaagatcagt ggtaaccctt cccttattaa
     2401 aaacatgcag agcagccacg cctactgcac acctctcaat gcagctttac aggcttccat
     2461 ggctgagaat agtatacctc tgtacactac cgcttccatg ggaaatccca ctctgggcag
     2521 cctggccagt gccatccggg aggagctgaa cggggccatg gagcacacca acagcaacga
     2581 gagtgacagc agtccaggca gatcccctat gcaagctgtg caccccatac acgtcaaaga
     2641 agaacccctc gaccccgagg aagctgaagg ccctctgtcc ttagtgacaa cagccaacca
     2701 cagtccagat tttgaccatg acagagatta cgaagacgaa ccagtaaatg aggacatgga
     2761 gtgaacctct gggcgggccg acccccgaga ccgaagattg gggaaaaaaa agcaaaacaa
     2821 atttaaaaaa aaaataaaaa aagaaagaaa ggaaaagaaa agaaaccacg tcaaaagtta
     2881 gcagtgaaac ccgccctccg tttcttgtac agtctggagg attttcgcta cattttgaca
     2941 actctgaaac gtgttaactc ttagtgccat caagaatccc atttgggagt atttttgatt
     3001 tttctacttt ttgttgacaa aagggatttg tactctgtgc attggatgga cctgtttggt
     3061 acttgggatt ttcctctttg agtcaacatc agtgttgtaa attcgataaa cggattcact
     3121 tttagcagca gactttgaac tgcagcttcg cccggctgat gctgggcggg cgccgaggac
     3181 acccgactga gctcacgtac ctgcgctgca gaccaagcct tcgcccgagt tcaagactcc
     3241 agtggacgac ctttttgcac agcgctgcat gttgatacca ctgcctttac tcactttggt
     3301 ttgttttgtt tttgtttttc gcttccagtt gggatggggg aaggcctttg tgtgtgtatt
     3361 ggggggaggg gttaaaaata attatcccaa attttttaat gtattgcttt tttttttttc
     3421 ttttactgtt tttttttctt tctttctttt tttttttggc ttctttacca ttttaagttc
     3481 tgacctcagg cctccatttg ggcccagggc ctcttggagg cttcgcgttt tctgtacctt
     3541 gtgatgaatg ttaataggcg tttttattat acagagctga atgtcatttc tcgtctgtag
     3601 ttttctggca ctcattccat tttcctatag acatcaccat gtttctctca agtttaaaac
     3661 aaaacaaaac aaaacattcc gttttggtct ttttccaaaa aaaaaaaaag agaaaagaaa
     3721 agaaaaaaaa agatcccaaa ggctgcacct tacacctgaa ggtccccaca cggggacatg
     3781 acatcctgcc agtaagagaa tgaatgacag aaaaggaaag agagaaacgc acgcgcgcac
     3841 actctaggga catggcagat tcatttcaca aaaacagtat tgggggtggg atgggggact
     3901 gttggaggtt tttctttttt ttctttttca tagcacccac cattgtgagt aactgccacc
     3961 acattctctc agcatcagga aacacagcca cgaaagaaac agaagagaat aaacaatcct
     4021 caatagttag actgtcacag tggccatgga agatcttccc tcctataatc aggtgaccag
     4081 gaccacaggc cctgtgccat cctcacccgc acaggttgct ctgtttgcaa aatgaccaaa
     4141 aagccagcat ggtgacaggg ctaagtttgt acagtagttc agacctgctc ggtggcattc
     4201 atctgtttta atgcaaatga gacttcacat tgaacttgtt atgggagtta atgaggactg
     4261 agctcagcag acgctaatgt gtcaggttcc agtgtgctaa gtcggtactg cagcttggtc
     4321 tgcaatgtga gcaccacacc caccacccca gtagcacaga cttcacggaa gaggacacca
     4381 ggtagacaga ccagggccca cagaatgaga tggctctagg tcaatatgcc ctcggccctt
     4441 caaacccctc cacatttccg tctgcacccg cttccctggc atgtatttat ctggggctgt
     4501 agcttttgtt tgggtttagt ttgagagcct ttcggagctt aatttatata ctttgtacct
     4561 ttttttattt ctaaaattac caaagatatt acgcaaaggt aaattatttt cttttatact
     4621 ttatctgatg aagccaaata tcctcttatt gttgatcaaa ggaggcgaaa ggattcagag
     4681 gcaaatgatg aggtccaggc tatttgccaa cctgagggaa attactgccc gtcagcagag
     4741 ttcatttagc agactatgta ggcaatggaa ccaaagtttt ttactttttt tttcctgttt
     4801 tttttttttt tctctttcct tcttttctct acctgtagag agaccaaaac taactcctat
     4861 aaggagaaaa tccggggcta ctgcagagaa aagaaatcaa gacaacagta ttatagctcc
     4921 tgtggaaaga atgggctagc atctcaaaga aaaagaaatg aatgtatgat gctgaaaatt
     4981 agtatataat cgaggagaca cttaggatga attcagagag aacggagaag tgtctggccg
     5041 ctcgaggcca cttctagaat aaagagattt ttagaacatt cgtacgccac ttttgtttaa
     5101 gggctgtgct ctgatcactg cgttaatctt ggtttatcct ggcatttatc ctctggtttc
     5161 cttctgcttt ttgttgatgt tttgttttat ttttttccta tttcagatta tgatttggtc
     5221 agtgtttttc atttacacac aaaaaaagct aacattccca cccactcata agcttagagt
     5281 agaacacctt tggcaatgac ttctgaaggt ttgctctgct ttctatagag gggcggtctg
     5341 tggttattca tgccccctcc accaccaccc cacccatctt ttccaggcag cttcacagtg
     5401 tgcaggcagt agccaggccg ggtcatggga agggggccct gtgcttctaa actgagtggt
     5461 tgctggttag atatacaaaa gaggataaaa ctctggtagg ttagttcatt ctcagcatgt
     5521 gtagctagac aagagtaaag ataacagcat ggggactgtt agtacgcaca cctcagttca
     5581 aacctttagg gaatgagttt aaaaaaaaaa ttaaaaatat acctttcact cagtcgtact
     5641 tagtcgtatg tcttgcatgc ttagtctaaa gactgtagca aagaaaataa ataaaagaga
     5701 aaaaattaga ttttatgtat cttttcaggt gtcatagcct ggcagaagaa ccaactgaaa
     5761 aaaaaaaaaa aagttctcag gctttacagc aagcaatctt cactctgatt tttagaattc
     5821 tgattctgtc cctcgggggg ttcccgcttc gtttgaatgg ggttgattcg gttgtacata
     5881 tatcccgatg tgtctgtgtg catctttgtc ttttgcgggg gagggccgag gggagggttt
     5941 ttttggtttc gttttgtttt gttttgtttt aattatttta ttttttaggt attgttccta
     6001 aaaaggaata aatgcataca cctgtttgtc aaaacatctt tgctttttgt gcaactgcat
     6061 tttattaata atacatttaa aaaaagaaga ggaagaagga aaagaaaata gtatctttga
     6121 gggaaaaaag tctactgtct gtaatggctt tgcagttaat gctgcgtgtg tacttcattt
     6181 tattgccctt gatttacaaa cattggatga catgttgata atgggaagaa agaaaaactc
     6241 cacacacaca tctctttctt tccctccccc tcctctctct ctcaaattgt aacatagttg
     6301 acaaaatgtg tttcctatcc tcattatttg gaacattttg tacaggtttg tggaatgggg
     6361 gtgagagagt gagtgtgtga gtgagtgtgt gttactgttt ttgatacatt cctagtcctt
     6421 gtgttttatc ataccactgc ctccttgact atcttaagtt cctaagtttg aaaaaaggaa
     6481 aaaaaaaaag ttgtttaaaa aaaaaaatgt tctctcttgc tgcagtcaat atttttgcat
     6541 gatgaaattc caggctcata ctttcaaagt tttatgagta aagtagtgat taataatggg
     6601 gagtgttgaa atattgaact ttttgtataa aaaaaatttt tttacaaggt cccaaggtgt
     6661 aaagacaatt tgttaccttt ttctttctct tcttagtaaa tattagcaaa cgtgagggag
     6721 gtcagcctgt gtcagacaca cacagtcact gatgaggacc caccctccat gagcttaggg
     6781 gtctattcat gtgagaaggc ttacagccat ctcagggtga acagcctagg cttacctgca
     6841 tggtgaccta gctgacaatc ccctccccac atcaaaagac agttgagttc atattcctag
     6901 catctcatca gccataataa gagaaagcct tggtttaaaa aaataaaaca aaatgataga
     6961 gccaaaagca ttataaatca ctagctcttt ttatttattt atttttttca gttacaatat
     7021 tgaagtctct cctctctttt ccacattcta gctgagctct ctgtctccaa gggcataaag
     7081 caaactctgc tatttgaatc ttgttggtac ctgttggcca gtgccatacc ctcctgacag
     7141 tctggaagtg ttttgcaact tggttttcct ttattatcat gagaagcaaa tggacaattc
     7201 taacggcgtc ttgtgggtcc actgtaactc gaagcggtcc ctgctaccca ggagcctggg
     7261 tggagacggt gcggtctggg ttgtgagtgt ggtgctcttt gtatctgtgc tgccgctaac
     7321 agggatcgtt ttgttttgtt ttgataagac ataaaagaat ctcattcctt gatatcaact
     7381 gtaattccac cattccatgt ctgtggacac agacaataaa aaaaaatgtt gtgtagtcag
     7441 tagtaattac tgacatgagc gcattcttaa atgcaataaa agtgctggtg gttcacactg
     7501 gtagacaaag tt
//
