LOCUS       XM_006505308            7516 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus forkhead box P1 (Foxp1), transcript variant
            X1, mRNA.
ACCESSION   XM_006505308
VERSION     XM_006505308.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006505308.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7516
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..7516
                     /gene="Foxp1"
                     /gene_synonym="3110052D19Rik; 4932443N09Rik"
                     /note="forkhead box P1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 11 mRNAs, 28 ESTs, 4120
                     long SRA reads, 10 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     24 samples with support for all annotated introns"
                     /db_xref="GeneID:108655"
                     /db_xref="MGI:MGI:1914004"
     CDS             645..2768
                     /gene="Foxp1"
                     /gene_synonym="3110052D19Rik; 4932443N09Rik"
                     /codon_start=1
                     /product="forkhead box protein P1 isoform X1"
                     /protein_id="XP_006505371.1"
                     /db_xref="GeneID:108655"
                     /db_xref="MGI:MGI:1914004"
                     /translation="MMQESGSETKSNGSAIQNGSSGGNHLLECGALRDTRSNGEAPAV
                     DLGAADLAHVQQQQQQALQVARQLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
                     QQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLL
                     QQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLAFQQQLLQM
                     QQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTS
                     SNHSSLDLTSTCVSSSAPSKSSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYG
                     HGVCKWPGCEAVCDDFPAFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERL
                     QAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPLTPVTQG
                     PSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAI
                     LESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTV
                     DEVEFQKRRPQKISGNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNPT
                     LGSLASAIREELNGAMEHTNSNESDSSPGRSPMQAVHPIHVKEEPLDPEEAEGPLSLV
                     TTANHSPDFDHDRDYEDEPVNEDME"
ORIGIN      
        1 agtcccgagc ggaggaatct attgttattt attgtgtggc agctgcacgc tgtgctcgcg
       61 gcccggccct cgcccgcgag tgcgtgtgtg cgcgcgtgtg cgtgtgtgag cggggggcgc
      121 gcgcgggcgg gagtgggcgc gcgcggggaa aggccccgaa aacaccttag tttgcaccga
      181 gagaccattt gccgcggacc ccgaaacttt gccccaggag gacggcgcgc ggcgggcgag
      241 cgggcgagcg ggcgaggggc agcggcggcg gcggcggcgg cggcggcgcg gagaagcgtg
      301 gggctgccgg cgcctcctcc ccggactcgg tggcgtccca ggagcttctg ctgactctcc
      361 tggtttccga gggaaccctt tcggccatgg tgagggctgc gctcccttct ctgccttgcg
      421 gtcaaccatg agcggatggg tgtgatgcct gctagcctaa agggctcctt ctgtgtgctg
      481 cagtcttgtg gcgttctgca ggccccctgc cagtgacccc aggcttttta tggctgtgag
      541 actcattaaa agctcagggg tgagacgtga cctttggagg tgactataac tgaagattga
      601 attacagaag ccaaaaaatt aaataaataa aaggtttttg agtcatgatg caagaatctg
      661 ggtctgagac aaaaagtaac ggatcagcca tccagaacgg gtccagcggt ggcaaccact
      721 tactagagtg cggggcactt cgtgacactc ggtccaacgg agaggcacca gcggtggacc
      781 tgggggcagc cgaccttgcc cacgtccagc agcagcaaca gcaggccctg caggtggcaa
      841 ggcagctcct ccttcagcag cagcaacagc agcagcagca acagcagcag cagcagcagc
      901 agcaacagca gcaacagcag cagcaacaac agcagcagca gcaacagcag cagcagcagc
      961 agcaagttag tggattaaag tctcccaaga ggaatgacaa gcaaccagct cttcaggttc
     1021 ccgtgtcagt ggctatgatg acacctcagg ttatcactcc tcaacaaatg cagcagatcc
     1081 tccagcagca ggtgctgagc ccccagcagc tccaggttct cctccagcag cagcaggccc
     1141 tcatgcttca acagcagcag cttcaagaat tttataaaaa acaacaggaa cagttgcagc
     1201 ttcaacttct ccaacagcaa catgctggaa aacagccgaa agagcagcag caggtggcta
     1261 cccagcagtt ggctttccag cagcagcttc tccagatgca gcagctgcag cagcagcacc
     1321 tcttgtctct ccagcgccaa ggcctcctaa caattcagcc ggggcagcct gcccttcccc
     1381 tccaacccct cgctcaaggc atgattccaa cggaactgca gcagctctgg aaagaagtga
     1441 caagtgccca cactgcagag gaaaccacaa gcagcaacca cagcagccta gacctgacca
     1501 gcacatgtgt ctcgtcctcg gcaccttcca agtcctccct aatcatgaac ccgcatgcct
     1561 ctaccaatgg acagctctcg gtccacactc ccaaaaggga aagcttgtcc cacgaggagc
     1621 acccccacag ccaccctctc tatggacatg gcgtatgcaa gtggccaggc tgtgaggcgg
     1681 tttgtgacga cttcccagcc tttctaaaac atctcaacag tgagcatgcg ctggacgata
     1741 gaagcacagc tcaatgtaga gtacaaatgc aggttgtaca gcagttagag ctacagcttg
     1801 caaaagacaa agagcgcctg caagccatga tgacccacct gcatgtgaag tctacagaac
     1861 ccaaagctgc ccctcagccc ctgaatctgg tatcaagtgt caccctctcc aagtctgcct
     1921 cagaggcttc tccacagagc ttacctcata ctccaacaac ccccaccgcc cccctgactc
     1981 ctgtcaccca aggcccctcc gtcatcacca ccaccagcat gcacacggtg ggacctatcc
     2041 gcaggcggta ctcagacaaa tacaacgtgc ccatttcttc agcagatatt gcgcagaacc
     2101 aagaatttta taagaacgcg gaagttagac caccatttac atatgcatct ttaatcaggc
     2161 aggccattct cgaatctcca gaaaagcagc taacactaaa cgaaatctat aactggttca
     2221 cacgaatgtt tgcttacttc cgacgcaatg cagccacgtg gaagaatgca gtgcgtcata
     2281 atcttagtct ccacaagtgt tttgtgcgag tagagaacgt taaaggggca gtatggacag
     2341 tggatgaagt agagttccaa aaacggaggc cacaaaagat cagtggtaac ccttccctta
     2401 ttaaaaacat gcagagcagc cacgcctact gcacacctct caatgcagct ttacaggctt
     2461 ccatggctga gaatagtata cctctgtaca ctaccgcttc catgggaaat cccactctgg
     2521 gcagcctggc cagtgccatc cgggaggagc tgaacggggc catggagcac accaacagca
     2581 acgagagtga cagcagtcca ggcagatccc ctatgcaagc tgtgcacccc atacacgtca
     2641 aagaagaacc cctcgacccc gaggaagctg aaggccctct gtccttagtg acaacagcca
     2701 accacagtcc agattttgac catgacagag attacgaaga cgaaccagta aatgaggaca
     2761 tggagtgaac ctctgggcgg gccgaccccc gagaccgaag attggggaaa aaaaagcaaa
     2821 acaaatttaa aaaaaaaata aaaaaagaaa gaaaggaaaa gaaaagaaac cacgtcaaaa
     2881 gttagcagtg aaacccgccc tccgtttctt gtacagtctg gaggattttc gctacatttt
     2941 gacaactctg aaacgtgtta actcttagtg ccatcaagaa tcccatttgg gagtattttt
     3001 gatttttcta ctttttgttg acaaaaggga tttgtactct gtgcattgga tggacctgtt
     3061 tggtacttgg gattttcctc tttgagtcaa catcagtgtt gtaaattcga taaacggatt
     3121 cacttttagc agcagacttt gaactgcagc ttcgcccggc tgatgctggg cgggcgccga
     3181 ggacacccga ctgagctcac gtacctgcgc tgcagaccaa gccttcgccc gagttcaaga
     3241 ctccagtgga cgaccttttt gcacagcgct gcatgttgat accactgcct ttactcactt
     3301 tggtttgttt tgtttttgtt tttcgcttcc agttgggatg ggggaaggcc tttgtgtgtg
     3361 tattgggggg aggggttaaa aataattatc ccaaattttt taatgtattg cttttttttt
     3421 tttcttttac tgtttttttt tctttctttc tttttttttt tggcttcttt accattttaa
     3481 gttctgacct caggcctcca tttgggccca gggcctcttg gaggcttcgc gttttctgta
     3541 ccttgtgatg aatgttaata ggcgttttta ttatacagag ctgaatgtca tttctcgtct
     3601 gtagttttct ggcactcatt ccattttcct atagacatca ccatgtttct ctcaagttta
     3661 aaacaaaaca aaacaaaaca ttccgttttg gtctttttcc aaaaaaaaaa aaagagaaaa
     3721 gaaaagaaaa aaaaagatcc caaaggctgc accttacacc tgaaggtccc cacacgggga
     3781 catgacatcc tgccagtaag agaatgaatg acagaaaagg aaagagagaa acgcacgcgc
     3841 gcacactcta gggacatggc agattcattt cacaaaaaca gtattggggg tgggatgggg
     3901 gactgttgga ggtttttctt ttttttcttt ttcatagcac ccaccattgt gagtaactgc
     3961 caccacattc tctcagcatc aggaaacaca gccacgaaag aaacagaaga gaataaacaa
     4021 tcctcaatag ttagactgtc acagtggcca tggaagatct tccctcctat aatcaggtga
     4081 ccaggaccac aggccctgtg ccatcctcac ccgcacaggt tgctctgttt gcaaaatgac
     4141 caaaaagcca gcatggtgac agggctaagt ttgtacagta gttcagacct gctcggtggc
     4201 attcatctgt tttaatgcaa atgagacttc acattgaact tgttatggga gttaatgagg
     4261 actgagctca gcagacgcta atgtgtcagg ttccagtgtg ctaagtcggt actgcagctt
     4321 ggtctgcaat gtgagcacca cacccaccac cccagtagca cagacttcac ggaagaggac
     4381 accaggtaga cagaccaggg cccacagaat gagatggctc taggtcaata tgccctcggc
     4441 ccttcaaacc cctccacatt tccgtctgca cccgcttccc tggcatgtat ttatctgggg
     4501 ctgtagcttt tgtttgggtt tagtttgaga gcctttcgga gcttaattta tatactttgt
     4561 accttttttt atttctaaaa ttaccaaaga tattacgcaa aggtaaatta ttttctttta
     4621 tactttatct gatgaagcca aatatcctct tattgttgat caaaggaggc gaaaggattc
     4681 agaggcaaat gatgaggtcc aggctatttg ccaacctgag ggaaattact gcccgtcagc
     4741 agagttcatt tagcagacta tgtaggcaat ggaaccaaag ttttttactt tttttttcct
     4801 gttttttttt tttttctctt tccttctttt ctctacctgt agagagacca aaactaactc
     4861 ctataaggag aaaatccggg gctactgcag agaaaagaaa tcaagacaac agtattatag
     4921 ctcctgtgga aagaatgggc tagcatctca aagaaaaaga aatgaatgta tgatgctgaa
     4981 aattagtata taatcgagga gacacttagg atgaattcag agagaacgga gaagtgtctg
     5041 gccgctcgag gccacttcta gaataaagag atttttagaa cattcgtacg ccacttttgt
     5101 ttaagggctg tgctctgatc actgcgttaa tcttggttta tcctggcatt tatcctctgg
     5161 tttccttctg ctttttgttg atgttttgtt ttattttttt cctatttcag attatgattt
     5221 ggtcagtgtt tttcatttac acacaaaaaa agctaacatt cccacccact cataagctta
     5281 gagtagaaca cctttggcaa tgacttctga aggtttgctc tgctttctat agaggggcgg
     5341 tctgtggtta ttcatgcccc ctccaccacc accccaccca tcttttccag gcagcttcac
     5401 agtgtgcagg cagtagccag gccgggtcat gggaaggggg ccctgtgctt ctaaactgag
     5461 tggttgctgg ttagatatac aaaagaggat aaaactctgg taggttagtt cattctcagc
     5521 atgtgtagct agacaagagt aaagataaca gcatggggac tgttagtacg cacacctcag
     5581 ttcaaacctt tagggaatga gtttaaaaaa aaaattaaaa atataccttt cactcagtcg
     5641 tacttagtcg tatgtcttgc atgcttagtc taaagactgt agcaaagaaa ataaataaaa
     5701 gagaaaaaat tagattttat gtatcttttc aggtgtcata gcctggcaga agaaccaact
     5761 gaaaaaaaaa aaaaaagttc tcaggcttta cagcaagcaa tcttcactct gatttttaga
     5821 attctgattc tgtccctcgg ggggttcccg cttcgtttga atggggttga ttcggttgta
     5881 catatatccc gatgtgtctg tgtgcatctt tgtcttttgc gggggagggc cgaggggagg
     5941 gtttttttgg tttcgttttg ttttgttttg ttttaattat tttatttttt aggtattgtt
     6001 cctaaaaagg aataaatgca tacacctgtt tgtcaaaaca tctttgcttt ttgtgcaact
     6061 gcattttatt aataatacat ttaaaaaaag aagaggaaga aggaaaagaa aatagtatct
     6121 ttgagggaaa aaagtctact gtctgtaatg gctttgcagt taatgctgcg tgtgtacttc
     6181 attttattgc ccttgattta caaacattgg atgacatgtt gataatggga agaaagaaaa
     6241 actccacaca cacatctctt tctttccctc cccctcctct ctctctcaaa ttgtaacata
     6301 gttgacaaaa tgtgtttcct atcctcatta tttggaacat tttgtacagg tttgtggaat
     6361 gggggtgaga gagtgagtgt gtgagtgagt gtgtgttact gtttttgata cattcctagt
     6421 ccttgtgttt tatcatacca ctgcctcctt gactatctta agttcctaag tttgaaaaaa
     6481 ggaaaaaaaa aaagttgttt aaaaaaaaaa atgttctctc ttgctgcagt caatattttt
     6541 gcatgatgaa attccaggct catactttca aagttttatg agtaaagtag tgattaataa
     6601 tggggagtgt tgaaatattg aactttttgt ataaaaaaaa tttttttaca aggtcccaag
     6661 gtgtaaagac aatttgttac ctttttcttt ctcttcttag taaatattag caaacgtgag
     6721 ggaggtcagc ctgtgtcaga cacacacagt cactgatgag gacccaccct ccatgagctt
     6781 aggggtctat tcatgtgaga aggcttacag ccatctcagg gtgaacagcc taggcttacc
     6841 tgcatggtga cctagctgac aatcccctcc ccacatcaaa agacagttga gttcatattc
     6901 ctagcatctc atcagccata ataagagaaa gccttggttt aaaaaaataa aacaaaatga
     6961 tagagccaaa agcattataa atcactagct ctttttattt atttattttt ttcagttaca
     7021 atattgaagt ctctcctctc ttttccacat tctagctgag ctctctgtct ccaagggcat
     7081 aaagcaaact ctgctatttg aatcttgttg gtacctgttg gccagtgcca taccctcctg
     7141 acagtctgga agtgttttgc aacttggttt tcctttatta tcatgagaag caaatggaca
     7201 attctaacgg cgtcttgtgg gtccactgta actcgaagcg gtccctgcta cccaggagcc
     7261 tgggtggaga cggtgcggtc tgggttgtga gtgtggtgct ctttgtatct gtgctgccgc
     7321 taacagggat cgttttgttt tgttttgata agacataaaa gaatctcatt ccttgatatc
     7381 aactgtaatt ccaccattcc atgtctgtgg acacagacaa taaaaaaaaa tgttgtgtag
     7441 tcagtagtaa ttactgacat gagcgcattc ttaaatgcaa taaaagtgct ggtggttcac
     7501 actggtagac aaagtt
//
