LOCUS       XM_036160320             837 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus forkhead box N2 (Foxn2), transcript variant
            X11, mRNA.
ACCESSION   XM_036160320
VERSION     XM_036160320.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..837
                     /gene="Foxn2"
                     /gene_synonym="3230402J05Rik; 6030465J18Rik; Fkh19; Foxn1;
                     HTLF"
                     /note="forkhead box N2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 2 ESTs, 99 long
                     SRA reads, 2 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 52 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:14236"
                     /db_xref="MGI:MGI:1347478"
     CDS             202..837
                     /gene="Foxn2"
                     /gene_synonym="3230402J05Rik; 6030465J18Rik; Fkh19; Foxn1;
                     HTLF"
                     /codon_start=1
                     /product="forkhead box protein N2 isoform X3"
                     /protein_id="XP_036016213.1"
                     /db_xref="GeneID:14236"
                     /db_xref="MGI:MGI:1347478"
                     /translation="MGPVIGMTPDKRAETPGAEKVAGLSQIYKMGSLPEAGDAARPKA
                     TLVGSESADDELTNLNWLHESSNLLTNLRLGSEGLPMVSPLYDIEGDEMPSFGPSCYQ
                     NPEKKSATSKPPYSFSLLIYMAIEHSPNKCLPVKEIYSWILDRFPYFATAPTGWKNSV
                     RHNLSLNKCFQKVERSHGKVNGKGSLWCVDPEYKPNLMQALKKQPFSSPQR"
ORIGIN      
        1 aggcgggagg ggtggggggg ggggggatgt ggtgctgcgg cggccgccac cgcagctgcc
       61 actgcctgct cgcgcctggg tgtcccggag gcggctgctg ggagccacgg gagcagctgc
      121 ggtgctctgc catattgtgt ctggcccggc ccggccctcg cctctggttc gcggcggctg
      181 agtgacgaaa tatacgagta aatgggtcca gtaattggaa tgactccaga taagagagct
      241 gagaccccgg gagctgagaa ggttgcagga ctgagtcaga tttacaaaat gggaagtttg
      301 cctgaagctg gggatgctgc caggccaaag gccactcttg tgggcagtga gtcagcagat
      361 gacgagctaa caaacttgaa ctggcttcat gagagcagta accttctaac aaacctcaga
      421 cttggaagtg aaggccttcc catggtcagt ccgctgtatg acatagaggg agatgagatg
      481 ccatcctttg gaccatcgtg ctaccagaac ccagaaaaaa aatcagcaac ttcaaagccc
      541 ccgtactcct ttagtcttct catttatatg gctattgaac actcgccaaa taaatgtttg
      601 cctgtcaaag aaatttacag ctggattctg gatcgcttcc catactttgc cactgcacct
      661 acaggctgga agaattctgt tcggcataat ctatccctga ataaatgttt tcagaaagtg
      721 gaaagaagtc atggcaaggt taatggaaaa ggctccttgt ggtgcgttga tccagaatat
      781 aagcccaatc ttatgcaggc cttaaagaag cagccttttt cttctccaca aaggtaa
//
