LOCUS       XM_036156941            5037 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus forkhead box K2 (Foxk2), transcript variant
            X3, mRNA.
ACCESSION   XM_036156941
VERSION     XM_036156941.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5037
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..5037
                     /gene="Foxk2"
                     /gene_synonym="1110054H05Rik; 5730434B08Rik;
                     6230415M23Rik; ILF; Ilf1"
                     /note="forkhead box K2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 81 ESTs, 1642
                     long SRA reads, 5 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     56 samples with support for all annotated introns"
                     /db_xref="GeneID:68837"
                     /db_xref="MGI:MGI:1916087"
     CDS             153..2105
                     /gene="Foxk2"
                     /gene_synonym="1110054H05Rik; 5730434B08Rik;
                     6230415M23Rik; ILF; Ilf1"
                     /codon_start=1
                     /product="forkhead box protein K2 isoform X3"
                     /protein_id="XP_036012834.1"
                     /db_xref="GeneID:68837"
                     /db_xref="MGI:MGI:1916087"
                     /translation="MAAAAALSGAGAPPAGGGAGGGGSPPGGWAVARLEGREFEYLMK
                     KRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGHSAAAPEPAQPRPDAGGDF
                     YLRCLGKNGVFVDGVFQRRGAPPLQLPRVCTFRFPSTNIKITFTALSSEKREKQEAPE
                     SPVKPVQPHISPLTINIPDTMAHLISPLPSPTGTISAANSCPSSPRGAGSSGYKVGRV
                     MPSDLSLMADNSQPENEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIY
                     THITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLV
                     EQAFRKRRPRGVPCFRTPLGPLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP
                     LEPEPGASQPKLAVIQEARFAQSAPGSPLSSQPVLITVQRQLPPAIKPVTYTVATPVT
                     TPTSQPPVVQTVHVVHQIPAVSVTSVAGLAPANTYTVAGQAVVTQAAVLAPPNPEPQE
                     NGDHREVRVKVEPVPAISPATLGAASRIIQTSQGTPVQTVTIVQQAPLGQHQLPIKTV
                     TQNGAHVVPMPTAVHSQVNNAASPLHMLATHASASASLPTKRQNGDQAEQPELKRVKA
                     EDGESIVIALSVDAPPAAVREKAIQN"
ORIGIN      
        1 gggccggcgc gcggccgtgc gagctcccgc cctcgcagct ctcctcgccg gccggcggtc
       61 tccgcgaccg tgctcggctc gcgcggccca cgaccgcgcc cgggcctcgg cccgctaggg
      121 cgcccgcgcg gatcggccag gcctcgcagg cgatggcggc cgcggcggcg ctctcgggcg
      181 cgggcgcccc tcccgcgggc ggcggggccg ggggcggcgg atccccgccg ggcggctggg
      241 ccgtggcgcg gctcgaaggc cgcgagttcg agtacctcat gaagaagcgg tcggtgacca
      301 tcggccgcaa ctcatcgcag ggctcggtag atgtgagcat gggccactcg agcttcatct
      361 cgcggcgcca cctggagatc ttcacgcccc cgggcggcgg ccatagcgcg gccgccccgg
      421 aacccgcgca gccccggccg gacgcgggcg gcgacttcta cctgcgctgt ctcggcaaga
      481 acggcgtgtt cgtggacggg gtgttccagc ggcggggggc gccgccgctg cagctgccgc
      541 gcgtgtgcac tttcaggttt ccgagcacaa atatcaagat aacattcaca gccctatcca
      601 gcgagaagag agagaagcag gaagcacctg agtcgccagt gaagcctgtg cagccacaca
      661 tctcacccct gaccatcaac attccagaca cgatggccca cctcatcagc ccccttcctt
      721 cccccacggg aactatcagt gctgccaact cctgcccatc cagtcctcgc ggagcagggt
      781 cttcagggta caaagtgggc cgtgtgatgc catcggacct cagtttaatg gctgacaact
      841 cccagccaga aaatgaaaag gaagcgtcag gtggagacag cccaaaggat gactcaaagc
      901 caccttactc ctatgcacag ttgatagtac aagcaattac aatggctcct gataaacaac
      961 ttaccctaaa tgggatttat acacacatca ctaaaaacta tccatactac aggactgcgg
     1021 acaagggctg gcagaattca attcgccaca atctctctct gaaccgttat ttcatcaaag
     1081 tgccacgttc ccaggaagaa ccaggcaaag gctccttctg gaggatagac cctgcctccg
     1141 agagcaagct ggtagagcag gcttttagga aaagacggcc taggggcgtg ccttgcttta
     1201 gaacccccct gggacctctc tcctctagga gtgccccagc ttctcccaac catgccggag
     1261 tgctgtctgc tcactccagt ggcgcccaga cccccgagag cctgtcgagg gagggctccc
     1321 cagccccctt ggagcctgag cctggcgcct cacagcccaa gcttgccgtc atccaggagg
     1381 ccaggtttgc ccagagtgca ccagggtcac ctctctctag tcagcccgtc ttaattactg
     1441 tccagcggca gctacccccg gccattaagc ctgtcaccta cactgttgca accccagtga
     1501 ccacacccac ctctcagcca cctgttgtgc agacggtcca tgttgttcat cagataccag
     1561 cagtgtcagt caccagtgtg gctggactgg ccccagcaaa cacatacaca gttgctggac
     1621 aagctgtggt cactcaggct gcggtgctgg ctcctcctaa ccctgaacca caagagaatg
     1681 gcgaccacag agaagtcaga gtgaaagtag aacctgtccc tgcaattagc ccagctacac
     1741 taggcgctgc tagccgaatc atccagacat cacagggcac ccctgttcag acagtgacca
     1801 tagtgcagca ggcgccttta ggtcaacacc agcttccaat aaaaactgta acgcaaaacg
     1861 gagctcatgt ggtacccatg cctacagcag tgcacagcca ggtgaacaat gcagcaagtc
     1921 ctctccatat gttggccacc catgcatcag catcggcatc cctgcccaca aagcgccaga
     1981 acggtgacca ggcagagcag ccagagctca agcgagttaa agcagaagat ggcgagagca
     2041 ttgtcattgc cctgagtgtg gatgcaccac cagcagctgt gagagaaaag gcaatccaga
     2101 actagctgtg ggagaccttt tcttcagaca tcaactttgt ggtgccaaaa ggagatgctg
     2161 cctctcattg aagcagggag cgctgcctct ctctcactga agcagggagc gcatcctcgg
     2221 tgggtaaagg gccctgcggt tggacttcac ctctcagcac tgaaaacatg aacccaggtg
     2281 gccttaaaac tccttaattt aaagacatct tacacttgaa cagacccaca acagcaaccc
     2341 tggttccaga ggtggtgtct ccgacagagc acttgctggg ccgttgtctg tgggctcagc
     2401 ttttactaca agcaagaaat ccaggtccca aaggactgag tctcctggga ggacgcagca
     2461 cctgctacaa gtggatcgcg ctggctttcc tttaggggac agggccacag ccatctgctg
     2521 ccctcatagg acctgctggc tgtggctgag agacaagaca gtgttttgtt gttcacatac
     2581 ggaattagaa tacttggcag tgtcctttct ttactgaata atggggtctt tgacatttca
     2641 tatcactcca tttctactct ggaaatttga gattcatttg ggggaaagag cgtcattctg
     2701 tttgtttctg tggtttgatt ttagcccgtg ggatggtttg ctctagtctg tcctgcctgt
     2761 gtttgggtgg ctctccctta ggacacctac ctgcccgttt ccgtttagag cagttacctg
     2821 atgaatttga cctaccttgt gccattgtag agggtgggtg ggctgaggct gcatggaccc
     2881 atgaggccag ggggcattgg gacaagagac cctgggagcc ttccagccgt caggctgcac
     2941 gcacgtacct gctctagctt gctgggtttg ttgtttgttt ctttatgtag actttgtcct
     3001 tggcgtaatt tcccactcta gtaaaacaag tctcctaaat attgtgtatg cttaaagcaa
     3061 cagatccctc cctcctggga aacagatcca ggcctctgtc acgccttttc agaccaaggt
     3121 cataaatctc tctctcccag aacctgggga atcatagagg tcagctctgg cctctgactg
     3181 gctatctgta tggcacactc gcagcaagag ctggtggaga gatgttgcca gttaacttga
     3241 gggtcttggg agtaagaccc tgcagccaag tatcaagcat tcaggccatt ttatgattct
     3301 caagaggttt ctctggattt tcagaatgac gtcccacact aatcctgact tatgtcacat
     3361 agcaagtaaa ctaagaggga agggtgagga gaagtgggga ggccagcagc ccagcccaca
     3421 ctcaggatca ccgctcacct ttccagagca ttctggactg agctgagcaa caggcagagg
     3481 gcgttagcct cattgtgagg tttttttttc cctgatgtca tcatcataac gttatttatt
     3541 taaatgtagt tattttggta tttaattttt tttaagagag ggggggaaac cctgtatttt
     3601 cctggtagaa tgaaatggct cagaatggta tatttaggca atttaaaaca ttatttacat
     3661 aaagaccaaa tatgataagt ctgttctaag tattgcttca cccacagtat ggagctgtca
     3721 caatgttact gcagatgatg cgtgttgaca tggagttact gcacccaagc tggatttata
     3781 taactcagcc acttaaacaa taaaggtgag acatgatgcg agtgagaaca tgtgtgtgcc
     3841 caccgcagtc tgcctcctcc atcgtttctg caggtaacct cggaatgtct gtctcgtaaa
     3901 ggtttgcagt ttgcagagta ctttaatttg ggttatattg tgcccagcat gtgcatccag
     3961 actatgggcc tcagttaacg tggtacactg gcaggccgct gccctagtca agggtgggct
     4021 caggtaccac caactggaca tactgtgtat ctggagatgt gtgtgtatag catgcttgcc
     4081 caggacttgt tccctatgag tgagatctgc aaactcgtta cctctgagcc ccaaacagac
     4141 cttatgggtc tgtaggagtt tcttttgggg atcatagaaa acatttaaag atggaaggag
     4201 gatttttttt ttttctttaa ggccaccttc tcagtctcgc gtgagtgaag tgtgccaata
     4261 ggcacacacc catcttttct ccttgctgct gtatcggcct tgctgctgct ttggtccata
     4321 ggaatgtaac gctgccaagg agagggcaga agctggaccc ttaggttatt aactgagtac
     4381 taaacccagg gtttcttccc agtgttgaag gcactacttt agttttatgt tcatctaagt
     4441 tcccagaagc ccctccatac accagagctg ggctcacgtg ctttggccct cagcagaggt
     4501 ctgatgtggg aacgtactat cctgacacaa ggagctcaca gcagtcccca gtgcctgtgg
     4561 caccactgct aaatgcttat ggagtctcac tttgaccttt accaaacttc tgagctccct
     4621 caggaacgag ataacttcag cagcgtaggc ttgaaccaca ccgaccacaa agggaagctc
     4681 acctgtgtcc tgggtacggt gcattccaga atgtgtgtgg cataacattg tatagctatt
     4741 tcccacactg tagaatgtgt tcacagacag cagctggtct ccgtaaatac cccaccccac
     4801 ttccttgtcc tctgctgggg agctggtcac agagtagccg tagtagttca gaaggggtcg
     4861 gggagcatca ggacttgggt tttctatgct gtgtgacaca aggagagaag tgacaatcgt
     4921 gaaggccaag catctgcagc tcagaggaag cagagtgctg atctgtgtgc aaagatttgg
     4981 aatttttaaa aagtaccaag ttcctgaaat tcaataaaat atttttatta attttaa
//
