LOCUS       NM_001033424            3658 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus fibronectin type III domain containing 3C2 (Fnd3c2),
            mRNA.
ACCESSION   NM_001033424 XM_284730 XM_908216
VERSION     NM_001033424.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3658)
  AUTHORS   Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V,
            Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs
            P, Fu J, Nefedov M, de Jong PJ, Stewart AF and Bradley A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK146031.1 and AK030291.1.
            
            On Sep 3, 2009 this sequence version replaced NM_001033424.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK146031.1, AK030291.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1922              AK146031.1         2-1923
            1923-2568           AK030291.1         1928-2573
            2569-3658           AK146031.1         2570-3659
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 47.36 cM"
     gene            1..3658
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /note="fibronectin type III domain containing 3C2"
                     /db_xref="GeneID:331491"
                     /db_xref="MGI:MGI:2685621"
     exon            1..81
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            82..761
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     CDS             380..3205
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /codon_start=1
                     /product="fibronectin type III domain containing 3C2"
                     /protein_id="NP_001028596.2"
                     /db_xref="CCDS:CCDS30341.1"
                     /db_xref="GeneID:331491"
                     /db_xref="MGI:MGI:2685621"
                     /translation="MADNNADTNPTDRITSSSAHATIISTSNAGFYTDINNSIIGPSI
                     STCNQVTSDETQEPPNTKSISSCTSENACNTFISTNDGLRPSDVGSTSENNHGETEAN
                     MGAGDNKQILGENQKKSQSSNASLKEHNTENGTQPCCFAIGKPVVSNIQTRSATVSWT
                     LKSNEKYDINSMSFELALYTSDENGIYENIYTGDGVSVALQDLQPSMVYFLRVTTMRG
                     AEHRSVSEVVSFTTPGCEPDPPLAPTLISRTKNSLSLQWKGSNENGSKISSFLLEWDE
                     GKGEDFKSCYSGRLKQHTLFKLNPSTKYSFRLAAKNDFGCSNFSETAVFYTSGKAPTA
                     PLPPKLKEAGIYSLSLEWCAPTNPNPNDTLTYVLEMEEENFGIGFKPAYDGEDLTCTV
                     RNLQRNTTYKFRIFACNLDGRSKPSGEVKYTTLPARPGCPKKPYVVGMIHAHQVTIGW
                     DLPKDNGGMNISSYSLEVCENSDGANLWKIIYNGTQQEFLYNDLQAATTYKLRVFCTS
                     PAGQSRPSDVLTIQTPTLPPESCRSQPLRGKTKGKDANLPDNHSVNGKPEAHVRGKKA
                     KGPHQDRKVHPSSEKKCAAVDTVGVGMFGGTAKVTSPGTIPGRVPVLQEVENRVPAKL
                     SSTCIAIRWEEPDCHGSPITGYNIEYEDKKIVTVKRITEYVLKDLQPNTTYRIRIQAI
                     NHYGLSPFSPSIRCKTKPLPPEPPQLNCVVYGHQSLRLKWGTVSSKKKLDYFINYNLL
                     MEDRSGRFSVIYRGPDVTHKVQKLSEYTEYKFKIQACNEAGEGPESDIYTFTTTKSPP
                     TALKAPKVHPLNNNCCEIKWESLEPIEGDPIIYCLQVNTGKKANQIYKGPNTSFSFSN
                     YHANSRYRFKVCAGRRYETSNGLQELWGPYSPSALFSTYKHHSGHGKGSGGKGKGKHN
                     GKVRKYRIGFALIAILCAVAIQYFLFK"
     exon            762..817
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            818..954
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1014
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1015..1153
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1154..1207
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1208..1329
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1330..1504
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1505..1591
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1592..1730
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1731..1802
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1803..1921
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            1922..2024
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            2025..2131
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            2132..2406
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            2407..2619
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            2620..2786
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            2787..2908
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
     exon            2909..3658
                     /gene="Fnd3c2"
                     /gene_synonym="5031408O05Rik; Gm775"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcagatgac aataagatca tctctggatg cagcataaaa aggttgggag acacttgcga
       61 ggacactgga gacctacaac taaacctatc ctcatggaag agtgagccat aaccaatttg
      121 atgaaaggac tgtaaatact ggagaatata caaagaagaa aataaaagat caccaatttg
      181 gtgaacgcaa gactagctct acatttagta acacaagttt gcttctgaac aaagccattg
      241 cacatctgct cctcctggta ctctctgtcc ttacactgtg aatactgctc cagatactaa
      301 cactgataac agtacttcaa atacgtactc tctgactact gtcttaaaca cttacaccat
      361 tgacagtgct ccaagaaaca tggctgacaa taatgcagac actaacccta ctgacagaat
      421 cactagttct tctgctcatg ccacaatcat ttctacctca aatgcaggct tttacactga
      481 catcaataac agtattatag gcccttccat aagtacttgt aatcaagtca catctgatga
      541 aactcaggaa ccaccaaata ctaagagtat ttcaagttgt acttctgaga atgcttgcaa
      601 cactttcatc tcaactaatg atggcctcag accttctgat gttggcagca cttctgaaaa
      661 caatcatgga gaaacagagg ctaacatggg agctggagac aataagcaga tattaggtga
      721 aaaccaaaag aagagtcagt cgtcaaatgc atcactgaaa gaacacaata cagagaacgg
      781 aacacagcca tgttgttttg ccattggaaa acctgtggtt tctaatattc aaacccgatc
      841 tgctactgtt tcatggactc tgaagagtaa tgaaaaatat gatattaatt ctatgtcatt
      901 tgaattggca ctgtacacca gtgatgaaaa tggaatctat gaaaacattt atactggtga
      961 tggcgttagt gtagccctac aagatctaca acctagcatg gtctactttt taagagtaac
     1021 aaccatgaga ggtgcagaac acagaagtgt gtctgaagtg gttagcttca caacaccagg
     1081 ctgtgaacca gaccctcctc ttgcacccac actgatcagc agaaccaaga acagcctgag
     1141 tttacaatgg aaaggttcca atgaaaatgg atctaaaata agcagctttc ttttggaatg
     1201 ggatgagggt aaaggtgaag acttcaaaag ttgttacagt ggacgcctga aacagcacac
     1261 gctatttaaa ctgaaccctt caacaaagta ttccttcaga ttagctgcca aaaatgactt
     1321 tggctgcagt aatttcagtg aaacagcagt cttctataca tcaggaaagg cgcctacagc
     1381 accacttcca cctaagttga aagaagcagg aatctatagt ttgtctctag agtggtgtgc
     1441 cccaacaaac ccaaacccaa atgacactct tacttatgtg ctagagatgg aggaagaaaa
     1501 ctttggaata ggttttaaac ctgcatatga tggagaagac ctcacctgca ccgtacgaaa
     1561 tctgcagaga aatactacat acaagtttcg gatttttgcc tgcaatctgg atggaaggag
     1621 taaacccagt ggagaagtaa aatatactac tcttccagct aggcctggat gtcctaaaaa
     1681 gccatacgta gtgggaatga ttcatgcaca ccaagtgaca attggatggg acttgcccaa
     1741 agacaacggt ggaatgaaca tttcaagtta cagcctagaa gtttgtgaaa attcagatgg
     1801 ggcaaatctc tggaaaataa tctacaatgg cactcaacag gaatttctgt ataatgacct
     1861 ccaagcagcc accacatata aactgagagt cttttgcaca tcacctgcag gccaaagccg
     1921 tccttcagat gtattgacaa ttcagacgcc tactcttcct cccgagtctt gccgttcaca
     1981 gcccttacgt ggtaaaacca agggcaagga tgccaacctt cctgacaatc attctgttaa
     2041 tgggaagccg gaagcacatg tgcgtggcaa aaaagcaaaa ggtcctcatc aggacagaaa
     2101 ggtgcacccc agctctgaaa agaaatgtgc agctgtggat acagttgggg ttggaatgtt
     2161 tggaggaact gcaaaagtga cttcacctgg aaccatccca ggaagggtcc ctgtgttaca
     2221 agaagttgaa aacagagtgc ctgccaagct atcatcaact tgcatagcta tccgctggga
     2281 ggagccagac tgtcatggct ctcctatcac tggatataac attgaatatg aagataaaaa
     2341 aatcgtgact gtcaaaagaa taaccgagta tgttctgaaa gatctacaac ctaatactac
     2401 atacagaatc agaattcaag ctatcaatca ttatggacta agccctttta gcccatcaat
     2461 aagatgcaaa accaaaccac taccaccaga gcctccacag cttaattgtg tggtctatgg
     2521 acaccagagt ctcagactca aatggggcac tgtctcaagc aaaaaaaaac ttgactactt
     2581 tatcaattac aacttactaa tggaagatcg atctggcaga ttttctgtca tttaccgtgg
     2641 gccggatgtg actcacaaag tgcaaaagtt gagtgagtat acagaataca agtttaaaat
     2701 ccaggcatgt aatgaagctg gggaaggacc agagtctgac atctacactt tcactactac
     2761 aaagtcccca cccactgcac tgaaagcacc taaagttcat ccactgaata acaactgttg
     2821 tgagatcaaa tgggagtctt tggagccaat tgaaggtgat cccattattt actgtcttca
     2881 agtcaacact ggaaaaaagg ctaatcagat ttacaaagga ccgaacactt ccttttcctt
     2941 ttccaactat catgcaaatt cacgctatcg cttcaaggtc tgtgcaggac gccgatatga
     3001 aacctccaat ggtcttcaag agctgtgggg gccatatagt cccagtgctc ttttctcaac
     3061 ttataagcat cactccgggc atggcaaagg cagtgggggt aaaggaaaag gcaaacacaa
     3121 tgggaaagtg agaaagtaca ggatagggtt cgcacttatt gctattttgt gtgctgttgc
     3181 tattcagtat ttcctgttca aatagtcaat tatttagaag aaaataaagc aaattatatc
     3241 acatttataa aatcttatat atatcttaat gcttattgat agaaagtagt aagaggaaaa
     3301 aacaaaacaa acaaaacaaa aacaaaacaa aaacattaaa aataaacaca aaaagcccta
     3361 cctttcattt ttaaagtttt tatgagggta gaagagagat ttctaaggta acaaaagtat
     3421 gttaaatttt accattttca ttgttctgtc aacaaacatt gccttgttat gtaaaattaa
     3481 gacatctgtg gaaactttct gccttcactt ttcaaggtaa tgttttcaaa aaatttagga
     3541 ctatgaaata acaacagtat tttggatttt attttagaac aatgtaagaa aaatcacttc
     3601 tgtctttcca tccatataac atccgtataa agtaataaaa atgtatctag caaactgc
//
