LOCUS       NM_001177648            4743 bp    mRNA    linear   ROD 19-AUG-2024
DEFINITION  Mus musculus formin binding protein 1 (Fnbp1), transcript variant
            3, mRNA.
ACCESSION   NM_001177648
VERSION     NM_001177648.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4743)
  AUTHORS   Zeni,C., Komiya,Y. and Habas,R.
  TITLE     Formin Binding Protein 1 (FNBP1) regulates non-canonical Wnt
            signaling and vertebrate gastrulation
  JOURNAL   Dev Biol 515, 18-29 (2024)
   PUBMED   38945423
  REMARK    GeneRIF: Formin Binding Protein 1 (FNBP1) regulates non-canonical
            Wnt signaling and vertebrate gastrulation.
REFERENCE   2  (bases 1 to 4743)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 4743)
  AUTHORS   Gurdziel,K., Vogt,K.R., Walton,K.D., Schneider,G.K. and
            Gumucio,D.L.
  TITLE     Transcriptome of the inner circular smooth muscle of the developing
            mouse intestine: Evidence for regulation of visceral smooth muscle
            genes by the hedgehog target gene, cJun
  JOURNAL   Dev Dyn 245 (5), 614-626 (2016)
   PUBMED   26930384
REFERENCE   4  (bases 1 to 4743)
  AUTHORS   Bebee,T.W., Park,J.W., Sheridan,K.I., Warzecha,C.C., Cieply,B.W.,
            Rohacek,A.M., Xing,Y. and Carstens,R.P.
  TITLE     The splicing regulators Esrp1 and Esrp2 direct an epithelial
            splicing program essential for mammalian development
  JOURNAL   Elife 4, e08954 (2015)
   PUBMED   26371508
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4743)
  AUTHORS   Furuta,D., Yamane,M., Tsujiuchi,T., Moriyama,R. and Fukushima,N.
  TITLE     Lysophosphatidic acid induces neurite branch formation through LPA3
  JOURNAL   Mol Cell Neurosci 50 (1), 21-34 (2012)
   PUBMED   22465231
REFERENCE   6  (bases 1 to 4743)
  AUTHORS   Kamioka,Y., Fukuhara,S., Sawa,H., Nagashima,K., Masuda,M.,
            Matsuda,M. and Mochizuki,N.
  TITLE     A novel dynamin-associating molecule, formin-binding protein 17,
            induces tubular membrane invaginations and participates in
            endocytosis
  JOURNAL   J Biol Chem 279 (38), 40091-40099 (2004)
   PUBMED   15252009
  REMARK    GeneRIF: FBP17 interacts with dynamin and regulates endocytosis by
            forming vesicotubular structures.
REFERENCE   7  (bases 1 to 4743)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Aizawa,H., Yuasa,S.,
            Nakajima,D., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: II. The complete nucleotide sequences of 400 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (1), 35-48 (2003)
   PUBMED   12693553
REFERENCE   8  (bases 1 to 4743)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   9  (bases 1 to 4743)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   10 (bases 1 to 4743)
  AUTHORS   Chan,D.C., Bedford,M.T. and Leder,P.
  TITLE     Formin binding proteins bear WWP/WW domains that bind proline-rich
            peptides and functionally resemble SH3 domains
  JOURNAL   EMBO J 15 (5), 1045-1054 (1996)
   PUBMED   8605874
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK122308.1 and AI843002.1.
            
            Transcript Variant: This variant (3) represents the longest
            transcript and it encodes the longest protein (isoform c).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK122308.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4702              AK122308.1         1-4702
            4703-4743           AI843002.1         1-41                c
FEATURES             Location/Qualifiers
     source          1..4743
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 21.78 cM"
     gene            1..4743
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /note="formin binding protein 1"
                     /db_xref="GeneID:14269"
                     /db_xref="MGI:MGI:109606"
     exon            1..230
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            231..346
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            347..403
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            404..551
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            552..614
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            615..719
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            720..848
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            849..995
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            996..1190
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1191..1373
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1374..1388
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1389..1498
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1499..1631
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1632..1753
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1754..1890
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            1891..2049
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     exon            2050..4727
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4705..4710
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /note="hexamer: AATAAA"
     polyA_site      4727
                     /gene="Fnbp1"
                     /gene_synonym="1110057E06Rik; 2210010H06Rik; FBP1; Fbp17"
                     /note="major polyA site"
ORIGIN      
        1 ccggtgcggg gcgggcgcgc tgcggcggtc gctgctgctg cttcctcggg ccattttgct
       61 ccgcgcggag cgacgagagg ttgcgagctc gggctagagg aggcgcgggc cgggggaagc
      121 ggcgggcttt ccgcattcac aaggttcgga gggccgcagc gatcgccggc gaagggggtc
      181 ggaggcccct tcccggtccc tgcaccatga gctggggcac tgagctctgg gatcagtttg
      241 acaacttgga aaaacataca cagtggggaa tcgatattct tgagaaatac atcaagtttg
      301 tcaaggagag gacggagatt gagctcagct atgccaagca actcaggaat ctttcaaaga
      361 aataccaacc taagaagaac tcgaaggaag aggaggagta caagtacacg gcttgcaaag
      421 cctttctttc caccctgaat gagatgaatg actacgccgg gcagcacgag gtcatctctg
      481 agaacatgac gtcacagatc acggtggacc tgatgcgcta cgttcaggag ctgaagcagg
      541 agaggaaatc gaacttccat gatggacgga aggctcagca gcacatagaa acgtgttgga
      601 agcaactgga gtcaagtaag aggaggtttg agcgggactg taaggaagcc gaccgggcac
      661 agcagtactt cgagaaaatg gacgctgaca tcaacgtgac caaggcggat gtggaaaagg
      721 cacgacaaca agctcagata cgccagcaaa tggcagagga cagcaaagca gattactcct
      781 taatcctgca gagattcaac caggagcaat gggaatacta ccatacccac atccccaaca
      841 tcttccagaa aatacaagag atggaggaga ggcggattgt gcgtattggg gagtccatga
      901 agacgtacgc agaggtggac cggcaggtga tacccatcat cgggaagtgc ctggacggga
      961 tagtgaaggc ggccgagtct atcgaccaga aaaacgactc ccagctggtc gtagaagcct
     1021 ataagtcagg attcgagcct cctggagaca ttgaattcga agattacaca cagccaatga
     1081 aacgcacagt gtcagacaac agcctttcca gctccaaaga aggcaagcct gagctcagat
     1141 ttggcggcaa gtccagaggc aagctctggc cattcatcaa gaaaaacaag cttatgtccc
     1201 ttttaacatc cccccatcag cctccccctc cgccccctgc ctctgcctca ccctctgctg
     1261 ttcccaacgg cccccagtct cccaagcagc caaaggaacc cctctcccac cgcttcaacg
     1321 agttcatgac ctccaaaccc aaaatccact gcttccggag cctaaagcgt gggctttctc
     1381 tcaagctggg tgtcacacca gaagacttca gcaacttccc acctgagcag agaaggaaaa
     1441 aactacaaca gaaagttgac gatctcaata gagagataca gaaggagacg gaccagagag
     1501 atgccatcac caaaatgaaa gatgtgtacc taaagaaccc tcagatggga gacccagcca
     1561 gcctggacca gaagctcacc gaagtcaccc agaacataga gaaactgcgg ctggaggctc
     1621 agaagtttga ggcctggctg gctgaggtag aaggcagact cccagctcgg agtgagcagg
     1681 cacgccggca gagtggactg tatgatggcc agacacacca gacggtcact aactgtgccc
     1741 aggaccggga gagcccagat ggtagttaca cagaggagca aagccaggag agcgagcaca
     1801 aggtcctggc cccggatttc gacgatgaat ttgatgatga ggagccgctt ccagccatag
     1861 ggacctgcaa ggccctctac acatttgaag gtcagaacga aggcaccatt tccgtagttg
     1921 aaggagagac gctgagcgtg attgaagagg acaaaggcga tgggtggact cgcatccgca
     1981 gaaatgaaga cgaggagggt tacgtcccca cttcctacgt cgaagtctat ttagacaaaa
     2041 acgccaaagg ttcctaaagg cgtggtgcac atggccagag tcccccgaga gcctcccggg
     2101 agggagccat catcgtccag cccgcttgtc cccacaggcc tccagcacca ctcaggctgg
     2161 ctgggcagcc tccagcccac ctgcaggctg ggtccccata tcctgcctcc ccttctcctt
     2221 cacagcatgt tcctgtggct ccgccagtcc ctctgcctgt gtacggcacg ggtgtttctc
     2281 tcctgcagcc ccccacgggg gctgtccact ttactctgct cccttcccac ccaggccacc
     2341 aagacagctg ggcatgtgcc ctgtgtccct gctccttccg ggctcccagt ccacctgctc
     2401 atcgcctggc cactccttgc acatctcaca ctgtgccttt gtcaactgtc acccctggtt
     2461 tcctggtgac taacaaaatt ctgacaagga gggccagttg tgcatcaggt ggactgagca
     2521 cccagctgtc atccatgcgt ctcttgggac tcatcgtcag atgtgtcctt catgtccaga
     2581 ggctgctgcc tcaggccttc cctgtcatcc agcactgtta ccttccacac tccattccag
     2641 gggatctaga gtaggactgg ggcacccagc ccccattcac ccccactctt gttataaacc
     2701 atctacatgg ccctaattca tattggagtc ccaaatccag cttgtgggcc agccccgctg
     2761 tcttgtctgt gtctaccttc tatgagcgct gcctacctgt ttgtggtacc ctgtgatgga
     2821 gggcctcaca gccacactag ttactgtaag gcgggcctgc ggagtcccat aagtagcatt
     2881 tgaggactct cctctgttcc caccaaagac cttgtgcctc ttgtagtccc tccaatggct
     2941 ctggccactg cttcttcatc ggatcctgtt ctccagaagc cccagagaat ggatggagct
     3001 cgcttttgaa gctgttgccc tcctagagtg gtggagcttg ggggagtacc gaggtggtcc
     3061 ttcgcacctt tgagccactc tctcctttcc tggtacagaa gtactcaagg ctttggccac
     3121 aagcccctgt gaagggtgcc ccacaagtat gagcttgagg aggttggcgt ctccctctgg
     3181 gcagttggta gcttagcatc aagtcagagg atgaaagaca gggaagtctt acaaaaccag
     3241 agacagggac agagagggca ggtcctcagg gttgggcctg tgctttgtcc acggtttgtg
     3301 gaagtgctga catccatgca ttggggccag tattacagac attttgtgag gtaccacctc
     3361 agagcagagg ggagggtacc aaggtggggg agcagctgac aaggtgggcc tggctttggg
     3421 tttcaagagc aagcaaggat tagcttcagg ctttcttggc cccgcctcct ccccgtaagg
     3481 ccaagcccgg cacactgccc tctgccctct gggacccctg tgaggctgtt caggactcac
     3541 atgaggaaga cctaggggac agtatggaag tctggtacct aagagtcagg gtctcagcgc
     3601 tgacacagtt agtctgacct gtggcccagg cagtttcgct ccagcaggtt accaggcatc
     3661 taactccaga acctctgact ttcagcaagt tgggctgacc acagccccct ccagagtgtt
     3721 ttttatgggt ctgttcacag atctcattaa tgcatgaagg acaaggaaag acttgccaca
     3781 aaggtaaaat ggagaggctg ccagtcttct tcagatgacc tttaaagcct gcgcctgtcc
     3841 ctgtgtcccc tcacttcttt tttaatttcc tgtactacct tacatccaga aaggatggtg
     3901 gatgagcgtc ttcaggccgt tctctgagaa agtcggtctg ccgtggacat cctgtggaac
     3961 tgtactggct ctggggggaa gggaatgcag gatttcccca gaagctctac actccctgtc
     4021 cccaggaccc actgcctgtc acccctagct gctagtgtgc tgagacaaga atgactcact
     4081 gtaaaagaac ctgccctgca gatgacttag agatggaaat aaaaggaacg tgacatttac
     4141 cgcttttttt ttttctatgc aggacgtgaa gctgcaatgg cccctccctc taggctgagc
     4201 atgcttatcc agggccccag cccaaacaac acacagggag gccattaatg ccttctggtg
     4261 gcatctgtag tgaacgtaga atgtccacat gaagttaaaa aaaaaaagtt ccgttcctgc
     4321 cagtattttt cccagaaatt gccgttttgt gattcctttt gattttgtgt ctgtataaca
     4381 tccaaaatgt ctctaatact ggccccaact tctcttttaa cctgacatca agcacctttt
     4441 aaatcatgcg tgtgcaagtt cgtgtatgtg tgtgtgtgcc tctgtatgtg tgtgtgtgtg
     4501 tgtgtgcgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgcg tgctaattct aagccttgag
     4561 ggcagggcac tgttgggaag gccctcagag ctgtcaggtc ttggtcttgc ctgtgactct
     4621 ggaggtggaa ttaaaaccaa acaaagtgct ttcagtagag agcactctta cccatgtaat
     4681 taaatgttag tcctttcaat gttaaataaa gtataacttc tagtgtaaaa aaaaaaaaaa
     4741 aaa
//
