LOCUS       NM_172844               3065 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus flavin containing monooxygenase 9 (Fmo9), transcript
            variant 1, mRNA.
ACCESSION   NM_172844
VERSION     NM_172844.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK029219.1.
            
            On Apr 6, 2007 this sequence version replaced NM_172844.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK029219.1, BC112405.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3065              AK029219.1         2-3066
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 74.03 cM"
     gene            1..3065
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /note="flavin containing monooxygenase 9"
                     /db_xref="GeneID:240894"
                     /db_xref="MGI:MGI:3606068"
     exon            1..86
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            87..202
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            203..347
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             213..1832
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="flavin containing monooxygenase 9 isoform 1"
                     /protein_id="NP_766432.1"
                     /db_xref="CCDS:CCDS15453.1"
                     /db_xref="GeneID:240894"
                     /db_xref="MGI:MGI:3606068"
                     /translation="MVKKQIAVIGAGISGLGAIKCCLDEDLEPTCFERNDDIGGLWKF
                     QKNASEKMPSIYRSVTINTSKEMMCFSDFPIPDHFPNYMHNSKLMDYFRMYAKRFSLL
                     DYIRFKTTVRSVRKRPDFHIHGQWDVVVETDGKQESLVFDGVLVCSGHHTDPHLPLKS
                     FPGIEKFEGCYFHSREYKSPEDYVGKRIIVVGIGNSGVDIAVELGRVAKQVFLSTRRG
                     SWILHRVWNNGYPMDSSFFTRFHSFLQKILTTEAVNKYLEKTLNSRFNHAHYGLQPQH
                     RPLSQHPTISDDLPNHIISGKVQVKPNVKEFTGTDVHFDDGTVEENIDVVIFATGYSI
                     SFPFLGDLIAVTDNEVSLYKLMFPPDLEKPTLAVIGLIQPLGIILPIAELQSRWAVRV
                     FKGLSKLPSVKAMKADMDQRKKAMEKRYVKTARHTIQVDHIEYMDEIASLAGVKPNLL
                     LLFLSDPTLAMEVFFGPCTPYQYRLQGPGKWDGARRAILTQRERIIKPLKTRITSEKS
                     RSAPGLFWIKMALFGLAFLVPSLTYFSYICQ"
     exon            348..536
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            537..699
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            700..842
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            843..1042
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1043..1395
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1396..1468
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1469..3065
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3043..3048
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /note="putative"
     polyA_site      3065
                     /gene="Fmo9"
                     /gene_synonym="4831428F09Rik"
                     /note="putative"
ORIGIN      
        1 ggttcatctt caagagcatg ggaagaacga catctctacc ttcatccaga agtccaaact
       61 aaacttcagt ttcctccttc ccaagggctt gagtctctga gttcaaagac tgtgtgatat
      121 cttctttagt ggcctctgca gcaatcacag tgcctagtct acagtttggg tcaatccaca
      181 cttgaaataa tatataaaaa ggtggtagca ccatggtcaa gaagcagata gctgtgattg
      241 gagctgggat cagtggccta ggagccatca agtgctgctt ggatgaagac ctggagccca
      301 cctgctttga aagaaatgat gacatcggag gcctgtggaa atttcaaaag aatgcttcag
      361 agaaaatgcc tagcatctac agatctgtga ccatcaacac ttcaaaggag atgatgtgct
      421 tcagtgattt ccctatccct gaccacttcc ccaactacat gcacaacagc aagctcatgg
      481 actacttcag gatgtacgcc aagcgcttca gtcttctgga ttacatccga tttaagacca
      541 cagtgaggag cgtgagaaaa cgtccagact tccacatcca tggacaatgg gatgttgttg
      601 tggagacaga tgggaaacag gagagcctag tctttgatgg ggtcctggtc tgcagtggcc
      661 atcacacaga cccccacctg ccactcaagt cctttccagg cattgagaag tttgaaggct
      721 gttatttcca cagccgagaa tacaaaagtc ctgaggatta tgtgggaaag agaatcatag
      781 tggttggcat tgggaattcc ggtgtggaca ttgccgtgga gcttggtcgt gtagcaaaac
      841 aggtattcct cagcaccaga cgaggatcgt ggattttaca ccgtgtttgg aataacggct
      901 atcccatgga tagttcattt ttcactcggt tccatagctt tctccagaag atattaacca
      961 cagaagcagt aaataagtac ctagagaaga ctctgaactc aagattcaac catgcacatt
     1021 atggtctgca gccacagcac agaccactga gccagcaccc caccatcagt gatgaccttc
     1081 caaaccacat catctccgga aaagtccagg tgaagcctaa cgtgaaggag ttcacaggaa
     1141 cggatgttca ttttgatgat ggcaccgtgg aggagaatat tgacgttgtc atctttgcta
     1201 caggatacag catttctttt ccattccttg gggatctgat tgcagttact gacaatgaag
     1261 tgtccctgta taagctgatg ttccctccag acctggagaa gccaactttg gctgtcattg
     1321 ggctcatcca gccattgggc atcatcctac ctattgcaga actccagtct cgctgggctg
     1381 tgcgggtgtt caaagggctg agcaaattac cctcagtgaa ggccatgaag gcagacatgg
     1441 accaaaggaa aaaggctatg gagaaacggt atgtaaagac agccaggcac acaatccaag
     1501 tggaccatat tgagtacatg gatgagatcg cctctctggc tggggtgaag cccaacctcc
     1561 tgctcctgtt tctctcggat ccaacactag ccatggaagt cttctttggg ccctgtaccc
     1621 cataccaata ccgtttgcaa ggtccaggga aatgggatgg ggcccggaga gccatcctga
     1681 ctcagagaga acggatcatc aagcccttga agacccgaat tacaagtgag aagagtcgct
     1741 ctgccccagg tctcttttgg ataaagatgg cactatttgg cctggcattt ctggttccaa
     1801 gtttaacata ctttagttat atttgtcagt gataaacata aatgaatgaa tgagctgctt
     1861 agtagggaaa acatgcactt ctactcattg tagattgttg caaagccttt agtcagtagc
     1921 atacaacaat ctcatttaac actgttatag ctacagaaat gtttagatag tctttacaag
     1981 tattagagtc ctttgaatgg gtgtgcatta acatttataa ggcatttttg aatgcacaag
     2041 aagtgcttat gtttaaaaca gtcttgggaa ctgatttaaa actggagaga tttttgcctc
     2101 caagtggacc ataaaaggtt ccaccaaggt tggttatact aatgggaatt tataaatatt
     2161 aactttgcac tgattttatt ttccacttgc attttttcct tctaactcat tctgttaact
     2221 tgtgtgaaga tgtgaaagtt tacgtttaaa aatataagtc agaatgtttt gtgtttcaac
     2281 agattagcag caatgaaatt actttttgtt taaattatga tgtttaaaga aagaactaaa
     2341 gaataaaaca gagtatatgc cagagctatc aatgacatac tttagctctc agtatttaga
     2401 aacaggtcat tgctgtgctg tgttaagatg gaatgaagat ttaagtagca accatgagtc
     2461 tctgctggct gtcctgtcag ttcacctggc tttctgacca ctctctccct atgtgggata
     2521 aataaatggc ttccttgctg ttggaggtcc aggagtgcca gaaggcttct ttacctcgaa
     2581 tgccttctca ttccaccaac tttcagaaag tgttcctaag actccacctc tgtcattttg
     2641 ttctcctgac tataaaacct caaacaacca tgggaagaag gtgtgaagac caagtaagga
     2701 gaccaaggag catatgacct cgcatcccag agggcacgtc aagaagctga agcatcacaa
     2761 ggcaagttat ttgccgagaa atctcttact ctctcagcag agtatctcaa ctgaaggctc
     2821 acttgttcca ctgggagggg gaaaaatgcc cacgtgcatt tcgggaactg gaaaggaatg
     2881 gagagaattc tgtgccacaa gacttccact gctactcaaa acgataacat aatcatctga
     2941 tgagtttgca cttgaccaca ggaaccattg acaactgctg gaaaactact tctcagaagc
     3001 tgaaagcata aaacagggaa ctttgccttg tgattgagat aaattaaaac aaatcttcat
     3061 gtggg
//
