LOCUS       NM_012056               3011 bp    mRNA    linear   ROD 26-NOV-2024
DEFINITION  Mus musculus FK506 binding protein 9 (Fkbp9), mRNA.
ACCESSION   NM_012056
VERSION     NM_012056.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Li,S., Xia,W., Sun,B., Peng,W., Yang,D., Gao,J., He,S., Yang,H.,
            Zhu,Y., Zhou,H., Xiang,T., Kong,Q. and Zhao,X.
  TITLE     The stability of FKBP9 maintained by BiP is crucial for glioma
            progression
  JOURNAL   Genes Dis 11 (6), 101123 (2023)
   PUBMED   39281835
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3011)
  AUTHORS   Kawaguchi,A., Ikawa,T., Kasukawa,T., Ueda,H.R., Kurimoto,K.,
            Saitou,M. and Matsuzaki,F.
  TITLE     Single-cell gene profiling defines differential progenitor
            subclasses in mammalian neurogenesis
  JOURNAL   Development 135 (18), 3113-3124 (2008)
   PUBMED   18725516
REFERENCE   4  (bases 1 to 3011)
  AUTHORS   Lepourcelet,M., Tou,L., Cai,L., Sawada,J., Lazar,A.J.,
            Glickman,J.N., Williamson,J.A., Everett,A.D., Redston,M., Fox,E.A.,
            Nakatani,Y. and Shivdasani,R.A.
  TITLE     Insights into developmental mechanisms and cancers in the mammalian
            intestine derived from serial analysis of gene expression and study
            of the hepatoma-derived growth factor (HDGF)
  JOURNAL   Development 132 (2), 415-427 (2005)
   PUBMED   15604097
REFERENCE   5  (bases 1 to 3011)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   6  (bases 1 to 3011)
  AUTHORS   Jo,D., Lyu,M.S., Cho,E.G., Park,D., Kozak,C.A. and Kim,M.G.
  TITLE     Identification and genetic mapping of the mouse Fkbp9 gene encoding
            a new member of FK506-binding protein family
  JOURNAL   Mol Cells 12 (2), 272-275 (2001)
   PUBMED   11710534
  REMARK    GeneRIF: Identification and genetic mapping of the mouse Fkbp9 gene
            encoding a new member of FK506-binding protein family.
REFERENCE   7  (bases 1 to 3011)
  AUTHORS   Shadidy,M., Caubit,X., Olsen,R., Seternes,O.M., Moens,U. and
            Krauss,S.
  TITLE     Biochemical analysis of mouse FKBP60, a novel member of the FKPB
            family
  JOURNAL   Biochim Biophys Acta 1446 (3), 295-307 (1999)
   PUBMED   10524204
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC043129.1, AK007499.1 and BB794531.1.
            
            On Apr 4, 2008 this sequence version replaced NM_012056.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC043129.1, AF279263.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1684              BC043129.1         1-1684
            1685-3008           AK007499.1         1075-2398
            3009-3011           BB794531.1         388-390
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 27.74 cM"
     gene            1..3011
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /note="FK506 binding protein 9"
                     /db_xref="GeneID:27055"
                     /db_xref="MGI:MGI:1350921"
     exon            1..369
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            370..515
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            516..705
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            706..851
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            852..1041
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..1187
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            1188..1374
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1520
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            1521..1684
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     exon            1685..3011
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2991..2996
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /note="hexamer: CATAAA"
     polyA_site      3009
                     /gene="Fkbp9"
                     /gene_synonym="1810014L23; FKBP-63; FKBP-9; FKBP60;
                     FKBP63; FKBP65RS"
                     /note="major polyA site"
ORIGIN      
        1 ggctcctccc ctcggcccgg cacggggcgg acgcgggcgg cggggggcgg gcgctgcggc
       61 ccggggctag ccgggagacc tttccacgtt tgcatcgccg cggcgcgccc agccttgccc
      121 ctcgcctccc cggagtccag gccgcgcgat ggcattaggg gcccggggct ggcggcgccg
      181 gtcgctgctc ctgctgctgc tctgggtgac cgggcaggca gccccggtgt tgggcctggc
      241 tgtgagctcg gaacttcaga tccagcagag cttcgtgcct gatgagtgtc cgcgcacggt
      301 gcacagtggc gacttcgtgc gctaccacta cgtggggact ttcctcgacg gccagaagtt
      361 cgactccagc tatgacaggg actctacctt caatgtgttt gtgggaaaag gccagctgat
      421 cgcagggatg gaccaagctc ttgttgggat gtgcgtaaac gagaggcgtc ttgtgacgat
      481 tcccccaaac cttgcctacg gaagtgaagg agtttctggt gtgatccctc caaactcagt
      541 tcttcatttt gatgtactct tggtggatat ctggaattct gaagaccagg ttcacattca
      601 gacctatttc aagcctccca gttgccctcg gactatccaa gtatcggatt ttgtgaggta
      661 ccactacaac ggaacgttct tggatgggac actgtttgat tccagccata atcgcatgaa
      721 aacctatgac acgtacgtgg ggattggatg gctgatccct ggaatggaca aagggctgct
      781 gggcatgtgt gtcggcgaga agcgtatcat cacagtcccc ccttttctgg cctacgggga
      841 ggagggagat ggaaaagaca tccctgggca ggcatcctta gtctttgatg ttgcattgtt
      901 ggacctccat aaccccaagg ataccatttc cattgagaat aaggtggttc ctgagaactg
      961 tgagaggaga agtcagagtg gggacttcct caggtatcat tacaatggca cacttctgga
     1021 cggcactctc tttgactcca gctattcacg gaaccacacc tttgacacat acattgggca
     1081 gggctatgtg attcctggga tggatgaagg cttacttggt gtctgcattg gggagaggcg
     1141 aaggattgtg gtccctcctc acctgggcta cggagaaaaa ggcagaggga gcattcctgg
     1201 ctcagccgtg ctggtgttcg acatccacgt gattgacttt cacaaccctt cggattccat
     1261 cagcatcact tcccactaca agcctccaga ctgctcggtg ctgagtaaga agggggatta
     1321 cctcaaatac cactacaatg cctcactcct ggatgggact ctgctggact ccacgtggaa
     1381 cttaggcaaa acgtataaca ttgtgttggg gtctggacaa gtcgtgctgg ggatggacat
     1441 gggtctcaga gagatgtgcg tgggagagaa gcggactgtg atcatcccgc cccacctggg
     1501 ctatggagaa gctggtgtgg atggagaggt ccctggcagt gccgtcctag tgtttgacat
     1561 cgaactgctg gagcttgtgt ctggccttcc ggaggggtac atgttcatat ggaatggtga
     1621 agtgtctccc aacctctttg aagaaatcga cagggatggc aatggggaag tcctcctgga
     1681 ggagttctca gagtacattc atgcccaagt ggcaacaggc aaagggaagc tggctcctgg
     1741 ctttaatgct gaaatgatcg tgaagaatat gttcaccaac caggaccgga atggagatgg
     1801 gaaggtcacg gctgaggaat ttaaactgaa ggatcaggaa gccaaacatg atgaactgta
     1861 agcctgacac agatcagtgt gtgccaagga gtgcatgaca ccaagcgacc tgtcgtggcg
     1921 gagcatgctg tcaaggtgtg aagctttcta ggaaggtttg agagtagcca gaattaggtg
     1981 ggccatgtag tacctggtgc agacagtggg gggtggctga tgcccacggt gaggacttgg
     2041 gtggatttcc agtgacagta aagagaatct gtatatagtg ctttggcaca aatgcaattg
     2101 gtctgaagca ccaattgcac ttgtgagtct tctgggaggt tgtgttaata aaggaaaatt
     2161 atttcataga agatgtagct gtcatggagg aaacagaaga agtacccagg tgtctaccta
     2221 aagaaacgat ttggtttaaa agtcttgcta gtgtcttcaa aaaagttcac catgggcaga
     2281 aagataaagg cacacatgtt tcagcaagtg tccttgacag cagccattgc tcttctcagt
     2341 gttctgtgca agctctggtg ataccaggcc ccgtgcgaca gccatcctgt caccttccct
     2401 acaaatctcc attttcatgc tttccagttc actctctaca ctggcagccc tccaattggt
     2461 agtgtctgtc acttaaaggt taacaggagt ctcctggaca ggaaaaacac agaccaaatg
     2521 gaagctgtct ttagtccatg agtagaggat ttgacctgca ttttctacat aggattggct
     2581 ttctctttct ccactctatt cctttgggga gatacatgat ggctgggtct cactggtcgg
     2641 ccaacagaaa attctactgt gactaaagtg gatgtgttat cccaacaaat gaaggtgaca
     2701 ctttctgttc tccccccccc catttgtgtc ttggaaggca atttgaggtc tcctgctgta
     2761 gaaaaggcta gcccattccc acaccatgtg gtagctatgc tcctacttta tgtcctcaga
     2821 taccaatgat gttggcactc actctgacgt aatcaggaca tttccgtttg aaatggcgtt
     2881 ttttacaaag ttaaactgtt ttgtactgat gttgccctga gatagttcat gcaaatgctg
     2941 tgcactcatt cagtggaata tagttggaaa actgacttct ttttttctga cataaaatgt
     3001 tgaatcatat c
//
