LOCUS       NM_153573               2707 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus FK506 binding protein 14 (Fkbp14), transcript variant
            1, mRNA.
ACCESSION   NM_153573
VERSION     NM_153573.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Carninci,P., Waki,K., Shiraki,T., Konno,H., Shibata,K., Itoh,M.,
            Aizawa,K., Arakawa,T., Ishii,Y., Sasaki,D., Bono,H., Kondo,S.,
            Sugahara,Y., Saito,R., Osato,N., Fukuda,S., Sato,K., Watahiki,A.,
            Hirozane-Kishikawa,T., Nakamura,M., Shibata,Y., Yasunishi,A.,
            Kikuchi,N., Yoshiki,A., Kusakabe,M., Gustincich,S., Beisel,K.,
            Pavan,W., Aidinis,V., Nakagawara,A., Held,W.A., Iwata,H., Kono,T.,
            Nakauchi,H., Lyons,P., Wells,C., Hume,D.A., Fagiolini,M.,
            Hensch,T.K., Brinkmeier,M., Camper,S., Hirota,J., Mombaerts,P.,
            Muramatsu,M., Okazaki,Y., Kawai,J. and Hayashizaki,Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY775871.1, AK081692.1 and BC024846.1.
            
            On Jun 3, 2018 this sequence version replaced NM_153573.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC029109.1, AK030620.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-20                BY775871.1         2-21
            21-1369             AK081692.1         2-1350
            1370-2707           BC024846.1         1751-3088
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 27.01 cM"
     gene            1..2707
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="FK506 binding protein 14"
                     /db_xref="GeneID:231997"
                     /db_xref="MGI:MGI:2387639"
     exon            1..328
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     CDS             132..767
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /EC_number="5.2.1.8"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; peptidyl-prolyl cis-trans isomerase FKBP14;
                     rotamase; PPIase FKBP14"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP14
                     isoform 1 precursor"
                     /protein_id="NP_705801.1"
                     /db_xref="CCDS:CCDS20157.1"
                     /db_xref="GeneID:231997"
                     /db_xref="MGI:MGI:2387639"
                     /translation="MRFFLWNAILALWVTVLSGALIPEPEVKIEVLQKPFICHRKTKG
                     GDLMLVHYEGYLEKDGSLFHSTHKHNNGQPVWFTLGILEVLKGWDQGLKGMCVGEKRK
                     LTVPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGPRSHESFQEMDLNDDWRLSKHEV
                     KVYLQKEFEKHGAVVNESHHDALVEDIFDKEDEDKDGFISAREFTYVHDEL"
     exon            329..480
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            481..608
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            609..2690
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2668..2673
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="hexamer: AATAAA"
     polyA_site      2690
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="major polyA site"
ORIGIN      
        1 agaaaaagtg ccacgtcttc ctgggagtgt gtctgttggg ggagtcctga acttgcttgg
       61 cctaagctgt ctccgctttt ggcacatttt taactctatg aagtcggggg cctttcctct
      121 gctttggtaa catgaggttt ttcttgtgga acgctatctt ggcactgtgg gtcacggttc
      181 tgagcggagc tctgattcct gagccagaag tgaaaatcga agttctccag aagccattca
      241 tctgccatcg caagaccaag ggaggggatc tgatgttggt ccactacgaa ggctatttag
      301 aaaaggacgg ctccctgttt cattccactc acaaacataa caatggtcag cctgtctggt
      361 tcaccctggg catactggag gttctcaaag gctgggacca aggcttgaag ggaatgtgtg
      421 tgggagagaa gcgaaagctc accgttcctc ctgccctggg ctatggcaaa gaaggaaaag
      481 gtaaaatccc tccagagagc acactgatat tcaacattga cctcctggaa attcgaaatg
      541 gcccaaggtc ccacgagtcg tttcaagaaa tggacctcaa tgacgactgg agactctcta
      601 agcatgaggt taaagtgtat ttacagaagg agtttgagaa gcacggtgcc gtggtgaatg
      661 aaagccatca cgatgctttg gtggaagata tttttgataa agaagatgaa gacaaagatg
      721 gatttatatc tgccagagaa tttacatatg tgcacgacga actgtaggga cgcgcctgcc
      781 attttataca cgttcatttc taatggaaag gcagcacctt tgaacaaagc ttttctcttt
      841 gcctttcttg tttttagttt tatattcttt ttctattatt taaagaacct cagagacttt
      901 gtaaatatcg ttcgtatctt tccagtgagt tattgggcag gaacggttgt ctttgagtag
      961 aggactccca ggccgcttct aagctcacat gggagttggc tttgcttcct tgcttctttc
     1021 taatggtaac atggcaactg gaaacacacc ccagcataca cacagggtgt agcacagacc
     1081 agggccctgt acttctccct ccctctgtct tctcaaagtc cagttactgg catatttgaa
     1141 agcttttgtg ctagttcaag gcttgctatt ttcatgttat agtgaagtga ttttttcttt
     1201 acctgctttt gagtccctgc ttgcaggcag gaggaatatg gtggacctta ttccttaaga
     1261 gctctggcct tactgtggag atacacaatg tggatgaatg agggaggtag caactcatga
     1321 ataggtggtc agagacgtcc tagtggctaa taaaccatta caataagtca gacaaataat
     1381 atatttgttt ccttgtaatc aacacaccaa aatatggtag gcatggcaga gagttgtatt
     1441 tataattaat gtttactttt ggagctacca agttagcctt ctggttctta aataaataaa
     1501 gtttgcagct agtatattac tttgcaacag cattgaatcc tgggagaaat tagtatgtca
     1561 atgagacttc cccatttctg attcatgaaa aataaggcta accaataaca gctactatta
     1621 atactgggca ctgacattta tcattttatc tcaaattggc ttccaaaaat gactactact
     1681 tctgtttttt agattgtttt taatcaaatt ggcttttatc ttaaaacaaa cttcccagac
     1741 ctccatttgt tatgctcctc atagtttaca cgtgcacaat tgcctgactg ggggtgtctg
     1801 acacccctgg gaagctgctg ggtcttgggg tacttcttta taggtgagaa gctctgttca
     1861 gagattggct ggtgagccca gccttggtgc ctaagctgta gatgcacctt cagtccctga
     1921 gttcagtctt ccacttctct gctaatgaag atgcagcaag tttgcgtctc tctctcttgg
     1981 tccttatttc ccttagcatc ttcacctctg gggataattc ctgccagttc ctagctgatc
     2041 acagctttcc ttaggatcca ggaaggtctg tgttttctga gaatagtctt gctttgtgtg
     2101 tctctctccc agtaaccccc tgagaggggt taggtgtatg tcttatggca tctaagttca
     2161 cctgttcctg tcacttcctg ttgtttgtag acattgtatt gcaacacgaa ttctgcattg
     2221 acattgttac tggcgagaat tactcaaggg cttgttcttg aagatgtcag gggtaactgt
     2281 aactgttgcc acctgcattt ttctggggag gttgtgagaa agccagtgag tgtcgtagac
     2341 cagtggtgtg tcttgaaggc tgctttgctc caagctgcca ccaccatctg cgctggagca
     2401 gtgaagaaga aagaatcttg accactcaat tacatggatt tttatcagat ctcagctaaa
     2461 ctttcaaaca gaagtatgaa agaaagacat acctggagaa aatggttgtt aaagccatct
     2521 gccattgtgt atagcaatgc ctttgcaccc tcccattagt gggaatagtc aaacaccaaa
     2581 tgtgacttca catgtatata ctttgactcc tagctgctct ctgtgtaata tttaaatttc
     2641 tatgtctatt gtgacactct ttttgaaaat aaagtttatt tgggaaataa aaaaaaaaaa
     2701 aaaaaaa
//
