LOCUS       NM_194345               4051 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus FHF complex subunit HOOK interacting protein 2B
            (Fhip2b), mRNA.
ACCESSION   NM_194345 XM_001480783 XM_914171
VERSION     NM_194345.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4051)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4051)
  AUTHORS   Tonelli Gombalova,Z., Kosuth,J., Alexovic Matiasova,A.,
            Zrubakova,J., Zezula,I., Giallongo,T., Di Giulio,A.M., Carelli,S.,
            Tomaskova,L., Daxnerova,Z. and Sevc,J.
  TITLE     Majority of cerebrospinal fluid-contacting neurons in the spinal
            cord of C57Bl/6N mice is present in ectopic position unlike in
            other studied experimental mice strains and mammalian species
  JOURNAL   J Comp Neurol 528 (15), 2523-2550 (2020)
   PUBMED   32212159
REFERENCE   3  (bases 1 to 4051)
  AUTHORS   Qian,C.L., Ding,C.L., Tang,H.L., Qi,Z.T. and Wang,W.
  TITLE     Retinoic acid induced 16 deficiency exacerbates high-fat
            diet-induced steatohepatitis in mice
  JOURNAL   Cell Biochem Funct 38 (6), 753-760 (2020)
   PUBMED   32289885
  REMARK    GeneRIF: Retinoic acid induced 16 deficiency exacerbates high-fat
            diet-induced steatohepatitis in mice.
REFERENCE   4  (bases 1 to 4051)
  AUTHORS   Xu,Y.L., Ding,C.L., Qian,C.L., Qi,Z.T. and Wang,W.
  TITLE     Retinoid acid induced 16 deficiency aggravates colitis and
            colitis-associated tumorigenesis in mice
  JOURNAL   Cell Death Dis 10 (12), 958 (2019)
   PUBMED   31862898
  REMARK    GeneRIF: Retinoid acid induced 16 deficiency aggravates colitis and
            colitis-associated tumorigenesis in mice.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4051)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU152183.1, CF170130.1, CD348387.1, BM942664.1, CN529793.1,
            AC154563.2 and BC058108.1.
            
            On or before Sep 9, 2009 this sequence version replaced
            XM_914171.3, XM_001480783.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR13948564.4549027.1,
                                           SRR13422600.1206280.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-44                BU152183.1         1-44
            45-712              CF170130.1         1-668
            713-1186            CD348387.1         37-510
            1187-1328           BM942664.1         1-142
            1329-1773           CN529793.1         31-475
            1774-1774           AC154563.2         137018-137018
            1775-4051           BC058108.1         80-2356
FEATURES             Location/Qualifiers
     source          1..4051
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 36.32 cM"
     gene            1..4051
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /note="FHF complex subunit HOOK interacting protein 2B"
                     /db_xref="GeneID:239170"
                     /db_xref="MGI:MGI:3036290"
     exon            1..94
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            95..173
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            174..346
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            347..451
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            452..574
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            575..820
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            821..1017
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1018..1126
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1203
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1204..1393
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1394..1539
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1540..1668
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1669..1759
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1760..1903
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            1904..2044
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            2045..2145
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     exon            2146..4034
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4012..4017
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /note="hexamer: AATAAA"
     polyA_site      4034
                     /gene="Fhip2b"
                     /gene_synonym="Fam160b2; G430067P06Rik; Rai16"
                     /note="major polyA site"
ORIGIN      
        1 gctgcgccgc caccgggagc cgggccgcga gccgggccgg gccgccatca tgctgagccg
       61 gctcggggca ctgctgcagg aggccgtggg ggcgcgggag cccagcattg acctgctgca
      121 ggccttcgtg gaacattgga aaggcatcac acactactat atcgagagca cagatgaaaa
      181 caccccagcc aagaaaacag atatcccctg gcgactgaag cagatgttgg acatcctggt
      241 gtatgaggag aagcagcagg catcctctgg tgaggctgga ccctgtctgg aatacttgct
      301 acaacacaag atcctggaga ccctgtgcac tctgggcaaa gcggagtacc ccccaggcat
      361 gcgacaacag gtgttccagt tcttcagcaa ggtcctgagc caggtgcagc acccactgct
      421 gcactacctg agtgtgcaca ggcctgtgca gaaacttctc cgacttggag ggacagtccc
      481 tggatccctc acagaaaagg aagaagttca gttcaccagt gtcctctgct ctaagataca
      541 gcaggatcca gagctgctgg cctatattct agagggtaaa aaaattatag gtaagaagaa
      601 aacagccaga gagtctacag ctccgcctaa agacatagct ggctacaggg acaaggactg
      661 tccccacagt gatgctctca acagggatcc tggactggat aaggagcact gtggtgtccc
      721 agcactgagc atccacctgc ccgctgagac tgaggggcca gaaaacgggc ctggggagag
      781 caatcttatc acctccctgc tgggactgtg caagagcaag aagagtcggc tggccctgaa
      841 ggcacaggag aacatactgc tgctggtaag cgtggcctca ccagcagctg ccacctacct
      901 gacacagagt acctcctgct gtatggcgat agctgagcac ctctgccaac tgtaccggtc
      961 catgccagcc tgccttgacc cagcagacat tgccacttta gagggcatca gctggaggtt
     1021 acccagtgcc ccatctgatg agaccgcttt ccctggcaag gaggctctgg ctgccttcct
     1081 gggctggttt gattactgtg accacctcat cacagaggca cacacggtgg ttgcagatgc
     1141 cttggcaaag gctgtggctg agaagctgtt tgtagagacc ctgcagcccc agctcctgca
     1201 tgtatctgag cagagcatcc tgacctccac tgccctgctg acagccttgc tgcgtcagct
     1261 gcgctcccct gcactgctgc aggaggccat gaccttcctc ttaggcactg accagcatcc
     1321 tgcagccata gaggacagcc cccatactct gggtacacac ctcatcatgc actgtgacca
     1381 tctctcagac gagatcagca ttgccacgct gaggctattt gaggagctgc tgcagaagcc
     1441 ccatgagcag gccatccgca gtctggtcct gcagaacctc gagggccgcc tgtacgtggc
     1501 ccggggctcg ccggagccgg agagctatga ggatacccta gatctggagg aagaccccta
     1561 cttcaccgat ggcttcctcg attctggcct tcagccctcc acaaagcctc ccccagctcc
     1621 cgccaccagt tcggatggca aaacagcagt gacggagatt gttaacagct tcctttgcct
     1681 ggtccctgag gaagccaaga catcagcctt cctggaggag aatggatatg acacatacgt
     1741 gcacgatgcc tacggcttgt tccaggagtg cagctcccgt gtggcccact ggggttggcc
     1801 cctaggccca gcgcccttgg actctcatga gcctgaaagg cctttctttg agggtcgctt
     1861 cctccaagtg ctctttgatc gaatcgcccg gattttggat cagccgtaca gcctgaacct
     1921 acaagtgacc tcagtcttgt cccggctcgc cttgttcccc cacccccata tccatgagta
     1981 cctcctggat ccctacatca gcctggcccc tggctgcagg agcctgttct ctgtgcttgt
     2041 cagggtgatc ggtgacttaa tgcaaagaat tcagagggta ccccagtttt cgggcaaact
     2101 gctcctggta cgcaagcaac tgatgggcca ggttcccgga gagcatctgg accatcagac
     2161 cctactccag ggtgtggtag tacttgagga attctgcaag gagctggctg ccattgcgtt
     2221 tgtcaagttt cccccacacg gtccttacct gaacttctct ccacctccag aagggcaagt
     2281 ctgagccagg agcatgacgg gtgggggaag attcctgcct gtgtacttct gcccacgggc
     2341 agtctcctgc ctggccatgc tgccactctg tcctccatgc cggggacttc agctgcagga
     2401 cacctcacct gttgacccca cgagctgagg tttcaaggag gtgctggctc ctaaggcagt
     2461 ggtattcttg gagcctttta gaggagctag aggatggcca gtgagcgcct agatgctgcc
     2521 ctgcatgtgt tgcgtgacta tctctgctat attgtgacca gggccacaac atgagacaac
     2581 tccaggggcc agggagatga actgctgtct ttgaggctgg ctaaaaaaac aatccagtcc
     2641 agagagatgg ggaggggggg agcaagaacc ctgtctgtta cattaggtat catggaagct
     2701 gctaagactc ggcaggtttc tccgaggctt cacgaacagt agtggaggag acagaggagg
     2761 aggctgaggg gaagccccct cttcctgctc taccctcctg gaggctgttg caaaattccc
     2821 aactgcctcc tggcagaggc ccaaagtatg ctctgcgccc aggcgggggc agctgctaac
     2881 aagagccctg gcgcagctgc agccagggca ggcgagagcc ttggagctgg gtgccaggct
     2941 ccagctccag ctccagctgg ttcctctctg gcgccttctg aacccgtctc agcaagtccg
     3001 aaacacctgg gcagagaggt cattgaccag ggatgggggc ccttgccctc tgaatcctgc
     3061 ccagtgccca ggggtccagg tggaatgtgg tcctggggac tataggaact caaggtacag
     3121 atgggacagg gcaccccaac tccaaacccc agaagcctag tgaggctagg ccgagacaca
     3181 agcagatagc tctggcattg ttcttcgtat gtcctccatg gctggggctg ctacctcacc
     3241 cggcctgaat ctgtctcaac ctgcaagagc actcgggcgg cgccaggcat tacctcacaa
     3301 caggcctgca gttgttggct tccctcctgg gcaaggagga gcaggccaga gccccttttg
     3361 cttccttttc ctgcccatgc cacctctcga agccgggcac aggttgccag gaggtgacat
     3421 gaaagaggag gaaactccat gacctctaca tcccccgcag tcctcccagc gggggaggac
     3481 ttctctgctg ctccgaagaa catcatgcac tcctgtgtgt gtgtgtgagt gtgtgtgtgt
     3541 gtgtgtgtgt gtgtgtgtgt gtatgtgtgt gtatatgtgt gtgtgtgtgt gtatgtgtgt
     3601 gtgtgtgtgt gagtgagtgt gtgtgtgtgt gtgtgtgtgt gagtgtgtgt gtatatgtgt
     3661 gtgtgtgtgt gagagagaga gagagaaagc gagctatgaa tgaatgtgag tgtgtgtgtg
     3721 tgtgtgtgtg agagagagag cgagctatga atgaatgtga gtgtgtgtgt gtgtgtgtgt
     3781 gtgtgagaga gagagagaga gagcgagcta tgaatgaatg tgagtgtgtg tgtgtgtgtg
     3841 tgtgagagag agagagagag agagagagct gtgagtacac atgggtgctg gtgtgggaca
     3901 ggagcagatc ttggtggagt gggtctacac ttgagatttg tactcgtttg agaggctggg
     3961 caatactcaa tgcactttgg catttgcatg gtgtcttcac aacagcacag caataaacat
     4021 tgtgattgtg tggaaaaaaa aaaaaaaaaa a
//
