LOCUS       NM_177868               4505 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus forkhead-associated phosphopeptide binding domain 1
            (Fhad1), mRNA.
ACCESSION   NM_177868
VERSION     NM_177868.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4505)
  AUTHORS   Zhang,X., Xue,J., Jiang,S., Zheng,H. and Wang,C.
  TITLE     Forkhead-associated phosphopeptide binding domain 1 (FHAD1)
            deficiency impaired murine sperm motility
  JOURNAL   PeerJ 12, e17142 (2024)
   PUBMED   38563001
  REMARK    GeneRIF: Forkhead-associated phosphopeptide binding domain 1
            (FHAD1) deficiency impaired murine sperm motility.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL663037.13 and AL645731.8.
            
            On Feb 12, 2013 this sequence version replaced NM_177868.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               AL663037.13        25583-25689         c
            108-314             AL663037.13        16429-16635         c
            315-555             AL663037.13        5138-5378           c
            556-665             AL645731.8         145727-145836       c
            666-908             AL645731.8         142399-142641       c
            909-1032            AL645731.8         134531-134654       c
            1033-1163           AL645731.8         133040-133170       c
            1164-1253           AL645731.8         124836-124925       c
            1254-1358           AL645731.8         123664-123768       c
            1359-1466           AL645731.8         117826-117933       c
            1467-1550           AL645731.8         115544-115627       c
            1551-1700           AL645731.8         114293-114442       c
            1701-1896           AL645731.8         111733-111928       c
            1897-1967           AL645731.8         100308-100378       c
            1968-2105           AL645731.8         99272-99409         c
            2106-2213           AL645731.8         93044-93151         c
            2214-2321           AL645731.8         89781-89888         c
            2322-2426           AL645731.8         88631-88735         c
            2427-2600           AL645731.8         82495-82668         c
            2601-2826           AL645731.8         80988-81213         c
            2827-2911           AL645731.8         78999-79083         c
            2912-3018           AL645731.8         78525-78631         c
            3019-3178           AL645731.8         76644-76803         c
            3179-3305           AL645731.8         76184-76310         c
            3306-3435           AL645731.8         69984-70113         c
            3436-3563           AL645731.8         69230-69357         c
            3564-3659           AL645731.8         65798-65893         c
            3660-3880           AL645731.8         65212-65432         c
            3881-4046           AL645731.8         64100-64265         c
            4047-4112           AL645731.8         59436-59501         c
            4113-4166           AL645731.8         56679-56732         c
            4167-4505           AL645731.8         50874-51212         c
FEATURES             Location/Qualifiers
     source          1..4505
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 74.75 cM"
     gene            1..4505
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /note="forkhead-associated phosphopeptide binding domain
                     1"
                     /db_xref="GeneID:329977"
                     /db_xref="MGI:MGI:1920323"
     exon            1..107
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..4277
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /note="FHA domain-containing protein 1;
                     forkhead-associated (FHA) phosphopeptide binding domain 1"
                     /codon_start=1
                     /product="forkhead-associated domain-containing protein 1"
                     /protein_id="NP_808536.2"
                     /db_xref="CCDS:CCDS51349.1"
                     /db_xref="GeneID:329977"
                     /db_xref="MGI:MGI:1920323"
                     /translation="MKAYLKSADGFFVLNKSTTIGKHADSDLVLQSADIDNHHALIEF
                     NEAEGTFVLQDFNSRNGTFVNECHIQNVAVKLIPGDILRFGSAGMTYELVIENPSPVS
                     CPWVRGPAPWPSPQPHLSSSPPDMPFHHGIQPATVQRSWSQGCPRPTMVPPAPHQRPM
                     SASGKMFSFVMDPKSPVINQVWANAMDMSEQCMMDGLSGTIPPTEIFMDHDLSQQDKD
                     EIILLLGREVNRLSDFEMESKYKDALIMNLQAEVADLSQRLSETAAVAAARQSNRCDP
                     KLQGVDEGDDLRQKEIESMKSQINALQKGYSQVLSQTLAERNTEIESLKNEGENLKRD
                     HAITSGMVTSLQKDMSARNEQVQQLQEEVNRLRIENREKEYQLEALSSRCSVMKEELR
                     KEEAQKDRREAQEKELKLCRSQMQDMEKEVRKLREELKKNYMGQNIISKTLREKNKVE
                     EKLQEDSRRKLLQLQEMGNRENLIKINLERAVGQLENFRNQVIKATFGKTKPFRDKPI
                     TDQQLIEKIIQVTEDNLSFQQRKWTLQRETHLHPKQEETMHSVEKLRVLLDKCQACMR
                     DSCSSIDLKKEVELLQHLPLSPLVSGLQKTVVNILRVSLSWLEETEQLLGDLDIELSD
                     SDKGFSLCLIYLLEHYKKIMSQSQDLQAQMNASRETQKSLRQEHLAEKEKLAEKLEQE
                     EKLKAKIQQLTEEKAALEESIGQEKSRSEEALEKAQARVRELENHLASQKEALENSVA
                     QEKRKMREMLEAERRKAQDLENQLTQQKEISENNTYEKLKMRDTLEKEKRKIQDLENR
                     LTKQKEEIELKEQKENVLNNKLKDALVMVEDAQQMKTTESQRAETLALKLKETLAELE
                     TTKTKMILTDDRLKLQQQSMKALQDERESQKHGFEEEISEYKEQIKQHSQTIVSLEER
                     LCQVTQYYQKIEGEITTLKNNDTGPKEEASQDLTAGPPLDSGDKEIACDHLIDDLLMA
                     QKEILSQQEIIMKLRTDLGEAHSRMSDLRGELSEKQKMELERQVALVRQQSGELSMLK
                     AKVAQTTGLMEKKDRELKVLREALRASQEKPRPHLSTEQKPRTLSQKCDISLQIEPAH
                     PDSFSSFQEEQSFSDLGVKCKGSRHEETIQRQRKALSELRTRVRELEKANSCNHKDHV
                     NESFLELRTLRMEKNVQKILLDAKPDLTTLARVEIRPPQNSPFNSGSTLVMEKSVKTD
                     AGEALELSEKLYTDMIKTLGSLMNIKDMSSHTSLKHLSPKEREKVNHLRQKDLDLVFD
                     KITQLKTRLQRKEELLKGYEQELEQLRHSKVSVQMYQTQVAKLEDDVHKEAEEKALLK
                     EALERTEQQLSQERRFNRVFKQQKDRGEDPEQRNMSYSPFKDNEKQRRLFVEMVKSKM
                     QNSSVQAGAKKATLKTGQERETKKEAYKSTQSLSFVKPGGKN"
     exon            108..314
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            315..555
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            556..665
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            666..908
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            909..1032
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1163
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1253
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1358
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1359..1466
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1550
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1551..1700
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1701..1896
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1897..1967
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            1968..2105
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2106..2213
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2214..2321
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2322..2426
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2427..2600
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2601..2826
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2827..2911
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            2912..3018
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3019..3178
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3179..3305
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3306..3435
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3436..3563
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3564..3659
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3660..3880
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            3881..4046
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            4047..4112
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            4113..4166
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     exon            4167..4505
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4480..4485
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /note="hexamer: TATAAA"
     polyA_site      4505
                     /gene="Fhad1"
                     /gene_synonym="2900090M10Rik; B230311F11"
                     /note="major polyA site"
ORIGIN      
        1 ggaaatcaga aagaatgaaa gcgtatttga agagcgctga tggctttttt gtcctgaata
       61 aaagcaccac aatcggcaag catgcagatt cagacctcgt cttacagtcc gcagatatcg
      121 acaaccacca tgccctcatt gaattcaacg aggccgaggg caccttcgtc cttcaggact
      181 ttaactcccg caacggcacg tttgtcaacg agtgccacat tcagaatgtg gcggtgaagc
      241 tgatccctgg ggacattctg cggttcgggt ctgcagggat gacctacgag ctggtcattg
      301 agaacccgtc cccggtctcc tgcccatggg tgaggggccc agcaccttgg ccaagtccac
      361 agccacacct gtcgtcctcg ccacccgaca tgcccttcca ccacggtatc cagccagcaa
      421 cagtgcagag aagttggtca cagggttgtc ccagacccac catggtccca cctgcccctc
      481 accagcggcc catgagtgcc agcgggaaga tgttttcctt tgtgatggac ccaaagtccc
      541 ctgtcatcaa ccaagtgtgg gccaacgcta tggacatgtc agagcaatgc atgatggatg
      601 gactctccgg gacgatacct cccaccgaga tcttcatgga ccacgaccta agccagcaag
      661 acaaggacga gatcattctg ctcttgggga gagaggttaa tcggctctct gactttgaaa
      721 tggagtccaa atataaagac gctctgatca tgaacctgca ggctgaggtg gccgacctga
      781 gccaaaggtt gtcagagaca gccgctgtcg ccgcagccag gcagagtaac aggtgtgacc
      841 cgaagctcca gggcgtggat gaaggcgacg atctcaggca gaaggagatt gagagcatga
      901 aaagccagat caacgctctt caaaaaggct atagccaggt gctgagtcag accctggcag
      961 agcgcaacac ggaaatcgaa tccctgaaga atgagggcga gaacttaaag agagaccatg
     1021 ccattacatc agggatggtg acatctttac agaaagacat gtcagcacgc aacgagcaag
     1081 ttcaacagct gcaggaggag gtaaatcgac tgaggatcga gaacagggag aaggagtacc
     1141 agctggaagc cctgagctcc aggtgttcag tgatgaaaga agagctaaga aaggaagagg
     1201 ctcagaagga tcgcagggag gcccaggaga aagagctgaa gctatgcaga agtcaaatgc
     1261 aagacatgga gaaagaagtg aggaagctca gagaggaact aaagaagaac tatatgggtc
     1321 agaacatcat ctccaagacg ctacgagaaa agaacaaggt cgaagagaag cttcaggaag
     1381 attccagaag gaaattgctt cagctgcaag aaatggggaa cagagagaac ctcattaaaa
     1441 tcaatttgga aagggcagta ggccagctag agaacttcag aaaccaggtc atcaaagcca
     1501 ctttcggaaa aacaaagcca ttccgcgaca agcccatcac ggaccagcag ctgatagaga
     1561 agatcatcca ggtcaccgag gacaacctca gcttccagca gaggaagtgg accctgcaaa
     1621 gggagaccca tctgcacccc aagcaagagg agaccatgca cagcgtggag aagctgaggg
     1681 tgctgctgga caagtgccag gcttgcatga gggattcctg cagcagcatc gacctgaaga
     1741 aggaggtgga gctccttcag cacctgccgc tcagcccgct cgtgtcagga cttcagaaga
     1801 cggtagtgaa catcctgagg gtgtccctgt cctggctgga ggaaacagag cagctgctcg
     1861 gggacctcga catcgagctc tcggattctg acaaagggtt ctctctgtgt ctgatatatc
     1921 ttctggaaca ttacaagaaa attatgagcc agtcccagga tcttcaggcc cagatgaacg
     1981 cctctcggga aacacagaag tctctgcggc aggagcacct ggctgagaaa gagaagctgg
     2041 cagagaagct ggagcaagaa gagaagctga aagccaaaat ccagcagctg acagaagaga
     2101 aggcagctct ggaagagagc atcggtcagg agaaaagcag atcggaggag gccctggaga
     2161 aggcgcaagc ccgagtccgt gagctggaga accacttggc tagtcaaaag gaggccttgg
     2221 agaacagtgt ggctcaagag aaaagaaaaa tgcgggaaat gctggaggca gaaaggagga
     2281 aggcacaaga cctggagaat cagctgaccc agcagaagga gatctcagag aacaacacgt
     2341 atgagaaact caagatgaga gacactctag agaaggagaa gaggaaaata caggacctgg
     2401 agaatcgcct gactaagcaa aaagaggaga tagaattaaa ggagcagaaa gaaaacgtct
     2461 taaataataa attaaaagac gccctggtca tggtagagga cgctcagcag atgaagacaa
     2521 cggagagtca aagagccgag acgctcgctc tgaagttaaa ggaaacatta gcagagctag
     2581 aaacaaccaa gacgaaaatg atcctgacgg acgatcggct gaagctgcag cagcagtcga
     2641 tgaaggccct gcaggatgag cgggaatccc agaagcacgg cttcgaggag gaaatctcag
     2701 agtacaaaga gcagatcaaa cagcactcgc agaccatcgt gagcctagag gaaaggctct
     2761 gccaagtgac tcagtactac cagaagatag aaggggagat cacaacgttg aaaaacaacg
     2821 atacaggacc gaaggaggaa gcctcccaag accttacagc aggacccccc ctggacagtg
     2881 gtgacaaaga aatagcgtgc gaccatctga tagatgactt actaatggct cagaaggaaa
     2941 tcctatccca gcaggagata atcatgaagc tgaggactga cctcggggaa gctcacagcc
     3001 ggatgtcaga cctgagaggg gaactaagcg agaagcagaa gatggagctg gagcggcagg
     3061 tggccctggt gcgacagcag agcggggagc tgagcatgct gaaggcgaag gtggcgcaga
     3121 cgactggcct gatggagaag aaggacaggg aactgaaggt cctcagggag gcgctcaggg
     3181 cttcccaaga gaaacccaga ccccacctga gcacggagca gaagcctagg actctgagcc
     3241 agaagtgtga catctcattg cagatagaac cagcccaccc agactcattc tccagcttcc
     3301 aagaggagca gtccttcagt gacctggggg tcaagtgcaa agggtctcga cacgaggaaa
     3361 ccatccagcg gcagagaaag gccttgtcgg aactccgaac gcgagtcaga gaactggaga
     3421 aggccaactc ctgcaatcat aaggaccacg tgaatgaatc gttcctagag ctcaggaccc
     3481 tccggatgga aaaaaatgta cagaaaatat tattagacgc aaagcccgac ttgacaactc
     3541 tcgcaagagt agagatccga ccgcctcaga acagcccttt caactcgggc tccaccttgg
     3601 tcatggagaa gtccgtgaag acagacgctg gggaagcctt agaactcagt gagaagctgt
     3661 acacggacat gatcaagacg ctcggcagcc tgatgaacat caaggacatg tccagccaca
     3721 cgtccctgaa gcacctctca cccaaagagc gggagaaggt caaccacctc cgacagaagg
     3781 acctggacct ggtgtttgat aagatcactc agctcaagac ccggcttcag aggaaagagg
     3841 agctcctgaa gggatacgag caggaactgg aacagctcag gcatagcaaa gtgtccgttc
     3901 agatgtacca gacgcaggta gccaaactgg aggatgacgt tcacaaagag gcagaggaaa
     3961 aggcgctgct gaaggaagcc ctggagcgca cagagcagca gctgagccag gaaaggagat
     4021 tcaacagggt cttcaagcag cagaaggatc gaggagagga tccggagcag agaaacatgt
     4081 cctacagccc cttcaaagac aatgagaagc agagacgctt gtttgttgag atggtcaaga
     4141 gcaagatgca gaactcaagt gtccaggctg gagccaagaa agccaccctg aagacaggcc
     4201 aagagagaga gacaaagaag gaggcataca agtcgaccca gagcctttca tttgttaaac
     4261 ccggaggaaa gaactagaaa acacactgtc ccagggcttc acgcgatcct gagtcggtat
     4321 gactctccag taacaagtac tgagggacct ttgtgatgtg ttgaagatgg atgcttggat
     4381 gccttgcatt ctagattaat attttccata gaactttgga gtgtataagg aggagacttt
     4441 taaaaattat ccataaatgt atgtatatac atgcacatat ataaagaata tgtctataat
     4501 ccaga
//
