LOCUS       XM_006538544            2312 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus FGR proto-oncogene, Src family tyrosine
            kinase (Fgr), transcript variant X1, mRNA.
ACCESSION   XM_006538544
VERSION     XM_006538544.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006538544.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..2312
                     /gene="Fgr"
                     /gene_synonym="Ali18; Mhdaali18"
                     /note="FGR proto-oncogene, Src family tyrosine kinase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 ESTs, 1 long SRA read, 56 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:14191"
                     /db_xref="MGI:MGI:95527"
     CDS             333..1886
                     /gene="Fgr"
                     /gene_synonym="Ali18; Mhdaali18"
                     /codon_start=1
                     /product="tyrosine-protein kinase Fgr isoform X1"
                     /protein_id="XP_006538607.1"
                     /db_xref="GeneID:14191"
                     /db_xref="MGI:MGI:95527"
                     /translation="MGCVFCKKLEPASKEDVGLEGDFRSQTAEERYFPDPTQGRTSSV
                     FPQPTSPAFLNTGNMRSISGTGVTIFVALYDYEARTGDDLTFTKGEKFHILNNTEYDW
                     WEARSLSSGHRGYVPSNYVAPVDSIQAEEWYFGKISRKDAERQLLSSGNPQGAFLIRE
                     SETTKGAYSLSIRDWDQNRGDHIKHYKIRKLDTGGYYITTRAQFDSIQDLVRHYMEVN
                     DGLCYLLTAPCTTTKPQTLGLAKDAWEIDRNSIALERRLGTGCFGDVWLGTWNCSTKV
                     AVKTLKPGTMSPKAFLEEAQIMKLLRHDKLVQLYAVVSEEPIYIVTEFMCYGSLLDFL
                     KDREGQNLMLPHLVDMAAQVAEGMAYMERMNYIHRDLRAANILVGEYLICKIADFGLA
                     RLIEDNEYNPQQGTKFPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPYPGM
                     NNREVLEQVEHGYHMPCPPGCPASLYEVMEQAWRLDPEERPTFEYLQSFLEDYFTSTE
                     PQYQPGDQT"
ORIGIN      
        1 atgagaggaa gttagtgagc catgagagcc tctgtgaggg agaaggaggt atcagtgctc
       61 agtgaaagga cggtggagga tcctgaaagc ccacagtcag ggctctgagt gtatgcggtg
      121 agggatggtg atgccttcac accttagact cccacttgcc ccctcagccc aggactgtcc
      181 ctgccccatg ctctgaaggg aaaccggaac tcttgtagga ggtggtttcc tgccgctgcc
      241 cagtcttagt tcctttttgg tttccggcac ctcccaggga tcatgcatca gtcctattga
      301 cccaggagta ggggtctgtg ggggcatctg gaatgggctg tgtgttctgc aagaagttgg
      361 agcctgcatc caaggaggat gtgggcctgg aaggggactt ccggagccaa acggctgaag
      421 aacgctattt ccctgacccc actcaaggcc ggacttcgtc cgtctttcct cagcccacca
      481 gccctgcttt cctcaacact ggcaacatga gaagcatctc agggaccgga gtgaccatat
      541 tcgtcgccct gtacgactat gaggccagga caggggatga cctcaccttc accaaaggcg
      601 agaagttcca catcctgaac aatacggagt atgactggtg ggaggctcgc tccctgagct
      661 ccggacacag aggctatgtt cccagcaact atgttgctcc tgtggattcc atccaggctg
      721 aagagtggta cttcggaaag atcagtagaa aggatgcaga gaggcagctt ctgtcctctg
      781 gtaaccccca gggggccttt ctcattcggg aaagcgagac caccaaaggg gcctactccc
      841 tgtccatccg tgactgggac cagaacagag gcgatcacat aaagcattat aagatccgaa
      901 agctggacac gggcggctac tacatcacca cacgggccca gtttgactcc atacaggacc
      961 tagtgcggca ctacatggaa gtgaatgatg gtctgtgcta cttgcttacg gcgccttgta
     1021 ccaccactaa gccccagact ctaggcctgg ccaaggatgc ctgggagatc gaccggaact
     1081 ccatagcact ggaacgcagg ctgggcaccg gctgctttgg agatgtgtgg ctgggcacat
     1141 ggaactgcag cacaaaggtg gcagtgaaga cgctgaagcc gggcaccatg tccccgaagg
     1201 cattcctgga ggaggcacag atcatgaagc tgctgaggca cgacaagctg gtgcagctgt
     1261 atgcggtggt gtcggaggaa cccatttata ttgtgacaga gttcatgtgc tatggtagct
     1321 tgctggattt cctaaaggat cgagaaggtc agaacttgat gctgccccat ctagtggaca
     1381 tggctgccca ggtagccgag ggcatggcct acatggaacg catgaactat atccaccgag
     1441 acttgagggc agccaacatc ctggtggggg aatacctaat atgcaagatc gctgacttcg
     1501 ggctggcacg cctcatagag gacaatgagt ataaccccca acaaggaacc aagttcccca
     1561 tcaagtggac agccccagag gccgccctct ttggcagatt cactgtcaaa tcagacgtgt
     1621 ggtcctttgg gattctgctc actgaactga tcaccaaggg cagagttccc tacccaggta
     1681 tgaacaaccg ggaagtgttg gaacaggtgg agcatggcta ccacatgccg tgccctccag
     1741 gatgtcctgc atccctgtat gaggtcatgg agcaggcgtg gcgcctggat ccagaggaga
     1801 ggcccacctt tgagtacctg cagtctttcc tggaagacta tttcacctcc acagaaccac
     1861 agtaccagcc tggagaccag acatagcctg actgggcatc actgaccctc tgggagtatg
     1921 tacttgctct tgccaatccc ccggggcact ctggtcccag tgcccaagac ttggaacccc
     1981 tgtggaatcc tagcacagga tcagagaagg tccgacgctc tgaagccatt ttatagaggg
     2041 tgcaaatgga gacgagaaac tcatctctta cctcctctga ccccaagtgt tcatttttcc
     2101 cttcccaccc atgccccatc caaaaatcta gggcatccca ctcatttcac agatgaagta
     2161 agtggatgct cagagctcct ctctcgaaca ctctgacccc agtaccactt ttcctgtccc
     2221 attaggctcc gacataccgt tagtctctct ccccatctcc taaaaatact catcctttgt
     2281 ctagttattt ataaaactgt atttctcttc tt
//
