LOCUS       NM_028462               2308 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Mus musculus Fez family zinc finger 1 (Fezf1), mRNA.
ACCESSION   NM_028462 XM_133029 XM_912486
VERSION     NM_028462.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Wang,Q., Wang,Y., Kuo,H.C., Xie,P., Kuang,X., Hirokawa,K.E.,
            Naeemi,M., Yao,S., Mallory,M., Ouellette,B., Lesnar,P., Li,Y.,
            Ye,M., Chen,C., Xiong,W., Ahmadinia,L., El-Hifnawi,L., Cetin,A.,
            Sorensen,S.A., Harris,J.A., Zeng,H. and Koch,C.
  TITLE     Regional and cell-type-specific afferent and efferent projections
            of the mouse claustrum
  JOURNAL   Cell Rep 42 (2), 112118 (2023)
   PUBMED   36774552
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Amadei,G., Handford,C.E., Qiu,C., De Jonghe,J., Greenfeld,H.,
            Tran,M., Martin,B.K., Chen,D.Y., Aguilera-Castrejon,A., Hanna,J.H.,
            Elowitz,M.B., Hollfelder,F., Shendure,J., Glover,D.M. and
            Zernicka-Goetz,M.
  TITLE     Embryo model completes gastrulation to neurulation and
            organogenesis
  JOURNAL   Nature 610 (7930), 143-153 (2022)
   PUBMED   36007540
REFERENCE   3  (bases 1 to 2308)
  AUTHORS   La Manno,G., Siletti,K., Furlan,A., Gyllborg,D., Vinsland,E., Mossi
            Albiach,A., Mattsson Langseth,C., Khven,I., Lederer,A.R.,
            Dratva,L.M., Johnsson,A., Nilsson,M., Lonnerberg,P. and
            Linnarsson,S.
  TITLE     Molecular architecture of the developing mouse brain
  JOURNAL   Nature 596 (7870), 92-96 (2021)
   PUBMED   34321664
REFERENCE   4  (bases 1 to 2308)
  AUTHORS   Moreau,M.X., Saillour,Y., Cwetsch,A.W., Pierani,A. and Causeret,F.
  TITLE     Single-cell transcriptomics of the early developing mouse cerebral
            cortex disentangle the spatial and temporal components of neuronal
            fate acquisition
  JOURNAL   Development 148 (14) (2021)
   PUBMED   34170322
REFERENCE   5  (bases 1 to 2308)
  AUTHORS   Zhang,M., Du,S., Ou,H., Cui,R., Jiang,N., Lin,Y., Ge,R., Ma,D. and
            Zhang,J.
  TITLE     Ablation of Zfhx4 results in early postnatal lethality by
            disrupting the respiratory center in mice
  JOURNAL   J Mol Cell Biol 13 (3), 210-224 (2021)
   PUBMED   33475140
REFERENCE   6  (bases 1 to 2308)
  AUTHORS   Kurrasch,D.M., Cheung,C.C., Lee,F.Y., Tran,P.V., Hata,K. and
            Ingraham,H.A.
  TITLE     The neonatal ventromedial hypothalamus transcriptome reveals novel
            markers with spatially distinct patterning
  JOURNAL   J Neurosci 27 (50), 13624-13634 (2007)
   PUBMED   18077674
REFERENCE   7  (bases 1 to 2308)
  AUTHORS   Hirata,T., Nakazawa,M., Muraoka,O., Nakayama,R., Suda,Y. and
            Hibi,M.
  TITLE     Zinc-finger genes Fez and Fez-like function in the establishment of
            diencephalon subdivisions
  JOURNAL   Development 133 (20), 3993-4004 (2006)
   PUBMED   16971467
  REMARK    GeneRIF: These data indicate that Fez and Fezl repress the caudal
            diencephalon fate in the rostral diencephalon, and ZLI formation
            probably depends on Fez/Fezl-mediated formation of diencephalon
            subdivisions.
REFERENCE   8  (bases 1 to 2308)
  AUTHORS   Zhang,D., Stumpo,D.J., Graves,J.P., DeGraff,L.M., Grissom,S.F.,
            Collins,J.B., Li,L., Zeldin,D.C. and Blackshear,P.J.
  TITLE     Identification of potential target genes for RFX4_v3, a
            transcription factor critical for brain development
  JOURNAL   J Neurochem 98 (3), 860-875 (2006)
   PUBMED   16893423
REFERENCE   9  (bases 1 to 2308)
  AUTHORS   Hirata,T., Nakazawa,M., Yoshihara,S., Miyachi,H., Kitamura,K.,
            Yoshihara,Y. and Hibi,M.
  TITLE     Zinc-finger gene Fez in the olfactory sensory neurons regulates
            development of the olfactory bulb non-cell-autonomously
  JOURNAL   Development 133 (8), 1433-1443 (2006)
   PUBMED   16540508
  REMARK    GeneRIF: Fez is involved in the axonal projection of olfactory
            sensory neurons.
REFERENCE   10 (bases 1 to 2308)
  AUTHORS   Chen,J.G., Rasin,M.R., Kwan,K.Y. and Sestan,N.
  TITLE     Zfp312 is required for subcortical axonal projections and dendritic
            morphology of deep-layer pyramidal neurons of the cerebral cortex
  JOURNAL   Proc Natl Acad Sci U S A 102 (49), 17792-17797 (2005)
   PUBMED   16314561
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153639.4 and AK014242.1.
            
            On or before Jul 25, 2009 this sequence version replaced
            XM_912486.2, XM_133029.5.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC119565.1, AK014242.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-728               AC153639.4         100369-101096       c
            729-2305            AK014242.1         607-2183
            2306-2308           AC153639.4         97879-97881         c
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 10.55 cM"
     gene            1..2308
                     /gene="Fezf1"
                     /gene_synonym="3110069A13Rik; Fez; fez-like; Zfp312-like"
                     /note="Fez family zinc finger 1"
                     /db_xref="GeneID:73191"
                     /db_xref="MGI:MGI:1920441"
     exon            1..991
                     /gene="Fezf1"
                     /gene_synonym="3110069A13Rik; Fez; fez-like; Zfp312-like"
                     /inference="alignment:Splign:2.1.0"
     CDS             191..1618
                     /gene="Fezf1"
                     /gene_synonym="3110069A13Rik; Fez; fez-like; Zfp312-like"
                     /codon_start=1
                     /product="fez family zinc finger protein 1"
                     /protein_id="NP_082738.1"
                     /db_xref="CCDS:CCDS51725.1"
                     /db_xref="GeneID:73191"
                     /db_xref="MGI:MGI:1920441"
                     /translation="MDSSCLNATTKMLATAPARGNVMSTSKPLAFSIERIMARTPEPK
                     ALPVPHFLQGAVPKGDPKHSLHLNSSIPCMIPFVPVAYDTNSKAGVNGSEPRKASLEV
                     PAPPAVAPSAPAFSCSDLLNCALSLKGDLARDALPLQQYKLVRPRVVNHSSFHAMGAL
                     CYLNRGDGPCHPAASVNIHPVASYFLSSPLHPQPKTYLAERNKLVVPAVEKLPSGVAF
                     KDLSQAQLQHYMKESAQLLSEKIAFKTSDFSRGSPNAKPKVFTCEVCGKVFNAHYNLT
                     RHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTH
                     TRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCNICNKAFHQVYNLTFHMH
                     THNDKKPFTCPTCGKGFCRNFDLKKHVRKLHDSSLGLTRTPTGEPSSDPPPQLQQPPP
                     APLPPLQPTLPPPGPLPSGLHQGHQ"
     exon            992..1126
                     /gene="Fezf1"
                     /gene_synonym="3110069A13Rik; Fez; fez-like; Zfp312-like"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1259
                     /gene="Fezf1"
                     /gene_synonym="3110069A13Rik; Fez; fez-like; Zfp312-like"
                     /inference="alignment:Splign:2.1.0"
     exon            1260..2308
                     /gene="Fezf1"
                     /gene_synonym="3110069A13Rik; Fez; fez-like; Zfp312-like"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaactctgc gatgggctgg caggagtcca ttgggctggg caggcaggtt cggctggtga
       61 tgctggggag gaggaggagg aggctgctgg tggtgacggt gcctgtcctc tccgcaggtc
      121 tgtgacaagc aggggacaag gcaacgatcc cgcgactcaa ccccggctga ccgacgctgg
      181 cgactcagtc atggacagta gctgcctcaa cgcgaccacc aaaatgctag cgactgctcc
      241 agctcggggc aacgtgatga gcacatctaa acccttggct ttctccatcg aacgaatcat
      301 ggcgcgcacc cctgagccta aggccctgcc ggtcccccac ttcctgcagg gagccgtgcc
      361 caaaggggac cccaagcact ctctgcatct caactcgtcg atcccctgca tgatcccttt
      421 cgtccccgtg gcgtacgaca cgaactccaa agcgggagtg aatggctcag agccccgcaa
      481 ggcgagtttg gaggttccgg cgccgcccgc ggtggcgccc tctgcgccgg cgttcagctg
      541 cagcgacctg ctcaactgcg cgctaagtct taagggcgac ctggcccgcg acgcattgcc
      601 actacagcag tacaagctgg taaggccgcg tgtggtcaac cactcttcgt ttcacgccat
      661 gggtgccctg tgctacctga accgaggtga cggcccgtgc cacccggctg cgagcgtgaa
      721 catccacccg gtggcctcct actttctcag ttcccctttg cacccacagc ccaaaacgta
      781 tttagccgaa aggaataaac tggttgtacc ggcagtggag aaactccctt cgggagtagc
      841 tttcaaagac ctgtcccagg ctcagctgca gcattacatg aaagaaagcg cccaactttt
      901 gtcggaaaaa atcgctttca aaacctcgga tttcagccgc ggctctccaa atgccaagcc
      961 caaagttttc acttgtgaag tctgcggcaa ggtctttaat gcgcactata acttaacccg
     1021 tcacatgccg gtacacacag gagccagacc cttcgtgtgt aaagtgtgtg ggaaaggttt
     1081 ccggcaagct agcacccttt gccggcataa gatcattcac acacaggaga aacctcacaa
     1141 gtgcaaccag tgcggtaaag catttaacag aagttccacg ttaaacacac atacccgaat
     1201 tcacgcgggc tacaaaccat tcgtgtgtga attctgcggc aaaggatttc atcaaaaagg
     1261 gaattacaaa aatcacaagt taacccacag cggggagaaa cagttcaagt gcaatatctg
     1321 caacaaggct ttccaccagg tgtacaacct caccttccac atgcacactc acaacgacaa
     1381 gaagcctttc acctgcccca cgtgtggcaa gggcttttgt aggaactttg acctcaagaa
     1441 gcacgtccgc aagctacacg acagcagcct ggggctgacc cgcactccta ctggggagcc
     1501 aagcagcgat ccgccgcccc agctgcaaca gccgccgcct gcgcctctgc cgccactgca
     1561 gcctacattg ccgcctcccg ggcctctgcc atccgggctt caccaaggcc accagtgatg
     1621 gaggctaaag atctccctaa ccccaacctg agggccctca ctgcagaggt ccgcagacta
     1681 gagcggactt cttggtccaa gctcgcctgc aaaacctggg gcatgttggg tccccgcact
     1741 ttcgggagga ccggatgcct ctacatccct tggcctttcc gcctcttgca tgcacctgct
     1801 aaatggtttt gtgtattata ttctacatag gcactaacaa ttatgatata cttggagggg
     1861 cttatttcaa tttcttttga gttgaaaaga cttttcatct cgggtggaga gatggtgttt
     1921 gttctgtttt gtttttaaac aaatatctgc tgtatttatt gagatctgta ttattctacc
     1981 cgggaatgct gcatcatttt aattttatta ttgtaaatat ttccattgtg tcgtttctgc
     2041 cgtctcaaaa tgcctgctga tcgtttataa ttttctcctt ccccgaagca acaaaacacg
     2101 gtgtgtatgt tctatataca cacagaagtg tgtgcgtgcc tgtgaaggtg cggtcaacat
     2161 ttgtgagcac atacataata cacacataca cattagataa gagtggttca ttatgaatga
     2221 atttgaattt tggttttgat tcttgcacgt tgaagttgat tcattgactg ttggaaataa
     2281 aaacttggaa catgcttatt taatcaac
//
