LOCUS       XM_006523640           10271 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus FER tyrosine kinase (Fer), transcript
            variant X1, mRNA.
ACCESSION   XM_006523640
VERSION     XM_006523640.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006523640.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10271
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..10271
                     /gene="Fer"
                     /gene_synonym="C330004K01Rik; Fert; Fert2"
                     /note="FER tyrosine kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 12 ESTs, 570 long SRA reads, 12 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 28 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:14158"
                     /db_xref="MGI:MGI:105917"
     CDS             297..2768
                     /gene="Fer"
                     /gene_synonym="C330004K01Rik; Fert; Fert2"
                     /codon_start=1
                     /product="tyrosine-protein kinase Fer isoform X1"
                     /protein_id="XP_006523703.1"
                     /db_xref="GeneID:14158"
                     /db_xref="MGI:MGI:105917"
                     /translation="MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAY
                     TLQNLCNQVDKESTVQVNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTM
                     MIKDKQQVKKSYVGIHQQIEAEMIKVTKTELEKLKSSYRQLIKEMNSAKEKYKEALAK
                     GKETEKAKERYDKATMKLHMLHNQYVLALKGAQLHQSQYYDTTLPLLLDSVQKMQEEM
                     IKALKGIFDDYSQITSLVTEEIVNVHKEIQMSVEQIDPSTEYNNFIDVHRTTAAKEQE
                     IEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQQMLLHKEAAVLELE
                     KRIEESFETCEKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKALLEQKVQEND
                     GKEPPPVVNYEEDARSVTSMERKERLSKFESIRHSIAGIIKSPKSVLGSSTQVCDVIS
                     VGERPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDGQRRHFII
                     QFVDNLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLNPIPKDKKWVLNHEDVSL
                     GELLGKGNFGEVYKGTLKDKTPVAIKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKL
                     IGVCTQRQPVYIIMELVPGGDFLTFLRKRKDELKLKQLVRFSLDVAAGMLYLESKNCI
                     HRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSS
                     ESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEVFTIMMKCW
                     DYKPENRPKFNDLHKELTVIKKMIT"
ORIGIN      
        1 aacggtggcg cctattggct ggagcagtcc ccgtgacgcc gggtggcgac tggctcccgg
       61 gtctgagggg cttctgcttg tcaggttcta gctcagttct tttggctaga cctatgatca
      121 ctcccgtgag acttcactgc accctttctc aagtgtcttc ttcatcccta atgtgtcatt
      181 cctcaccatg gacctgctac gttagctaag gcatgggcca gcggggctag taggaagata
      241 tgtgctgact agcaggctca cgtgcacagt gtggaggata agctatatct tacaaaatgg
      301 gatttgggag tgacctgaag aactcacagg aagctgtgtt aaagttgcaa gactgggaac
      361 tacggttgct ggagacagtg aagaaattta tggctctgag aataaagagt gataaagaat
      421 atgcatatac tctacagaat ctttgtaatc aagttgataa agaaagcact gtgcaagtga
      481 attatgtcag caacgtgtcc aagtcttggc tactgatgat tcagcagaca gaacagctta
      541 gtaggataat gaagacacat gcagaggact tgaactctgg acccttgcac aggctcacca
      601 tgatgatcaa ggacaagcag caagtgaaga agagctatgt aggcattcat caacagatag
      661 aggcagagat gatcaaggtc acaaagacag aattggagaa attaaaatcc agctatcgac
      721 aattaataaa agaaatgaat tctgccaaag agaaatataa agaagcctta gcgaaaggga
      781 aggaaacaga aaaggccaag gagcgctatg acaaagctac aatgaagctt catatgctgc
      841 ataatcagta tgtgttggca ctgaaggggg cacagctcca tcagagccag tactatgata
      901 ccacacttcc tctgctgctg gactccgtgc aaaagatgca agaagaaatg ataaaagcac
      961 taaaaggtat atttgatgac tatagccaga taaccagcct tgttacagag gaaatagtga
     1021 atgtccataa agagattcaa atgtctgttg aacagataga ccctagcacc gaatataata
     1081 atttcataga tgttcacaga acaacagctg ctaaagaaca agaaatcgaa tttgatactt
     1141 ccctattaga agaaaatgaa aatcttcagg caaatgagat catgtggaat aatttaacag
     1201 cagacagttt gcaagtcatg ttgaagactt tagcggaaga gctcacacag acccagcaga
     1261 tgcttttaca caaggaggcg gccgtcctgg agctagagaa gaggattgaa gaatcttttg
     1321 agacctgtga aaagaagtct gacattgtgc ttcttctggg ccaaaaacag gcacttgaag
     1381 agttgaaaca gtcagtccag cagttgcgat gcactgaggc aaagtgtgca gcacagaaag
     1441 ctttgctgga gcaaaaagta caggaaaatg atgggaaaga accacctcct gtggtgaatt
     1501 acgaagaaga cgcgcggtca gtcacatcca tggaaagaaa ggagaggcta tccaaatttg
     1561 agtctattcg tcattcaatt gctgggataa ttaagtctcc aaagtcggta ctcggatctt
     1621 caacacaggt gtgtgatgtg atctctgtgg gtgagaggcc cctggcggag catgactggt
     1681 accatggtgc catccccagg atagaggcac aggaactgct gaagcagcaa ggagacttcc
     1741 tggtgcggga gagccatggg aaacctggtg aatatgtcct ttctgtatat tctgacggac
     1801 aaaggaggca ctttatcata caatttgtcg ataatctgta tcgattcgag ggcaccgggt
     1861 tttcaaacat tccccagctt atagatcacc acttcaatac aaagcaagtc atcaccaaga
     1921 agtctggggt ggttctgctc aaccccatcc caaaggataa gaaatgggtt ctcaatcatg
     1981 aagatgtttc attgggagaa ttactgggca aggggaattt tggtgaagtg tataagggca
     2041 cactaaagga taaaactcct gttgccatta aaacgtgcaa ggaagacctt cctcaggaat
     2101 taaaaataaa gtttctacag gaagccaaaa ttctgaagca atatgatcat cccaatattg
     2161 tcaaactgat aggcgtgtgc acacaaagac agcctgtcta catcattatg gaactggtcc
     2221 cagggggtga ttttctgacc ttcctgagga agaggaagga cgagctgaag ctgaagcagt
     2281 tggtgagatt ttccttggac gttgctgctg gcatgttgta tctcgagagc aagaactgca
     2341 ttcacaggga cctggctgca cggaactgcc tggtgggtga aaataatact ctgaaaatca
     2401 gtgactttgg aatgtctcgg caagaagacg gtggagtgta ttcatcttct ggcttaaagc
     2461 agattcctat taaatggaca gcaccggaag ctcttaatta tgggagatac agttctgaaa
     2521 gtgacgtgtg gagcttcggc atcctcctct gggagacctt cagcctagga gtctgcccgt
     2581 accctggaat gacaaaccag caagcgcgag agcaagtgga gagaggatac cggatgtcag
     2641 ccccacagaa ctgtccagag gaggttttta caatcatgat gaagtgttgg gattacaagc
     2701 ctgaaaaccg ccctaagttc aacgaccttc acaaagagct cactgtcatc aagaagatga
     2761 tcacatagtg ccagccaggg ctggatgcca cctgtaggac tctgtcctca gtcaccccca
     2821 ctttatacca ccttactgca accatctttg aaggttatgt ttttttatta actgggtttt
     2881 taaagtatgt tccactttaa actatgttaa aggcaaatct attcaagaaa taaatagtcc
     2941 tacccagagc cgtattagct aaccacagca accctgccat ttgataccgc tgtaaagaga
     3001 aaagcacagg actaatggta aaggccaaag aaaaaggcct gcctttaata cctaggtcca
     3061 ttggtgatct ccaaggtttt ctactctagg cacagcctgt gggctgctgt cttctgccac
     3121 aggccctcct cggttggtgc tataaacagc cttggtagcg catgcttgca ggacacgtgc
     3181 ccaccacagt tgctctccac tctgccaagg cgagattata tctataaata taatcatata
     3241 ttgggaatca tttggacttc ctagggtttc tctttctttt ctgtcagaac aagcccggtg
     3301 agaacatcac actgccgtgt cattttgtct tttacttccc cagtccaggc tacagaaaat
     3361 ggtgcacaga aaatttccag agagttcagg gcacagaggc agcagcttct gcaggacact
     3421 gcagaggaca aggatgacag gaagcatgtg tgggcagcta gccagtgttc accagggaga
     3481 agaaagcaag agtgcctgcc ttcctcccag acgtacgcct tcagaatacc ctatatctgg
     3541 gtctcaattc cctaacaagg tctaagaaat gttcaggagt tcatagagcc cagtggaaac
     3601 gttcttagat actagcgtcc acaggaagag cagcatggtt ctgattgtgt gtcttcatcc
     3661 taggagacaa tcccagaatg aaagtccctc tacttgtacc agtttctggg tcttcagaat
     3721 ccatgatgca tggttacaaa cacatccaca tatatctact gaagtgcagg gctgctgtga
     3781 atgaaatgga caggccagat gtcaagtcag cattgatgat gaaaatctct agggacaccc
     3841 acacctctat ctcctctttt ccactaaagc cactccctgg aaatcttact gataatgcac
     3901 aggtatacag cacagcatta aagtgtcgcc cgtggatcta atgtacatca ggtaaaacca
     3961 ggctgtgact gagctcaatc tcagctgtgt caaggacttt cccctgtgca cagttgtctc
     4021 aggatcagtg tccgggagat ggcctcctgc ctgcctggcc gtatagagca taggtcagac
     4081 tttgcaggag gcagctgaag agaaggactc gtatccatca tttcggtccc cttactaatt
     4141 ttgtaatctt aaacacattt agtgattcgt acacgcagac tgcagtgaag gcatagtgag
     4201 cctgtccgca ccattcacgg cagcacacaa accagcttcc tcctccgcac agctctccca
     4261 tgggtcagat acgctaaatc agcagagctg ccttccgatg gcacacacca tggcaacccg
     4321 agtgcaaact cagccattca cattaagggc cctgctctcc aggcatctgc cggccctcag
     4381 aaggagataa gacgctccct tccaggatgc aactgactct gtgtgtaata cactctgtac
     4441 atgaaaaaga gggaaaaaca gcctctcact acttagcagt ccgagcccag caagggacag
     4501 gaggctggct tggctctgcc tctgtgaaca agacatgaag cttaatccca gcattctggt
     4561 gtacagagaa catggcactg agactcgctc atccaggctc ttagaatttg caattcacat
     4621 cataactctt tgcttaaatt aaagaggctt ttcaaaacat catgacatct gcaacattta
     4681 aattctattt tattctttgt cccagagcag gcagaggtat agtttaagat taactcatcg
     4741 ggagcctttc agaatcatgt cagtcatcta gaatattaaa tttaacagag gcacatgcat
     4801 taaggaaagc ttatgcaaaa cattcttact gttaattttg ttatgcttga agcataattt
     4861 attcatccct tctgtcgatg ataattattg gaattatgta ctttaggagg ctaatccata
     4921 cccaaaaagt gcacatataa atacagttct gatttgcaag ttgatttagg gaaaagagcc
     4981 tgcagaaatg cacagaaatg cacaaaactc tacgacatcc ttgcttaaaa aaataataat
     5041 tgtccacagt ggtttcccgg taacactggt gtggatacac ttgaacctgg tcacggttcc
     5101 ttatttctct gtctgagagc tttgtgggcc tgttcatgac tgcgctcatc ggcatccctt
     5161 taggtcagca agctgggcat gaaggagaag gctggcgaac atgagcagcc tgacttccct
     5221 ctgctgtatc taccttgagt caccaggaaa ccttcctgag aaatgggagg tcattgcttg
     5281 tcaaagacag aaaacttttc tgtcatggcc acatttggtg cggacttcgt gtgatctaag
     5341 ctttctcctt aatgccgttt tcttaggaag acgataaaga attacttggc ctttttcagc
     5401 ccatcattct gctaccagga ccacaggggg aaaatcccat gtgattcttt ctcctttttc
     5461 caaggcttac cagggacagt agagttggtt cctgagtcat agctggccac cttctcacaa
     5521 acatccatcc acacagcctg cagtcattca gtgtgagtct cacagagaaa acagaattcc
     5581 tatgactgag agtgtgctaa tttcctaaaa caaccaagtt tccttctctg ttagccagtt
     5641 tccgtcagct agctcctctg acgtcaccac agcactgtgc tacgactgtt gtcaagcaag
     5701 cctgtcagtt gcaatctaac atgctgcacg ccagcattcg ggcagggagc aggaggtaca
     5761 gcaggtcagg tctgctgtgc agtgtgatcg tcacatgctc tgcaagcgtg cctgactatc
     5821 atcttaatgt gtgtgaccgt ccttcatgca tgtgtccttg aagcagagtg acacctaagg
     5881 gctatctgcc tgagcccctt cctttcagca tgctctgtgt gtcacaccgt tggcattctc
     5941 cctgccactt gtcagtagat gtgattgtca tgggaagtca ggctttccta ttggagatca
     6001 gagccctcat acaaaacagc agagcagcca agaaagagct gcagagaccc agctcgctta
     6061 tgtgtcagca tcttcagtag attggatcaa aagttttata tgaaaattga tcattaaagt
     6121 ggcatgagag tttactatga aaataaagta tttcctctta ttaacagatt tactatacca
     6181 ttagaatatt ttattagatt tttactttat atttttctgg gcttattagt ttcatgtcaa
     6241 gtctgaatac atactttttt gagaacccaa aatgtcattt ctgtataaga aaagaccctg
     6301 atttaaaagc cagcaagatc accctgctag gagttactga gacagattta agctcccata
     6361 aaatgtcctt ttgaaagtca tgttctaata cagatggtta atcaactata ttatcatcac
     6421 cctaagtcag tgtgagaaat gtcccctcac cccaggaacc atctctctgt cttccactaa
     6481 cgcaaagatg aaagtcagga atagcattat actttgctaa cttgacaaat gtctgggata
     6541 gtaagaaata accgtgctcc aaaataattc attactctgg ccaggactaa tgaactgggg
     6601 cacagtgggt ctgtcagtga gttgcccagg tggcctgcag gaaggccaaa caagaaagaa
     6661 ccagctcctc atagcacgtg gagaaactag acagactgtg tcaccaggag ccctgaggaa
     6721 atccaggggg ccagaccaga aaagagcatc agtcccaaag agcccaccgc aatgccagag
     6781 cctctccctg cagcaggagc cacttggcac cccactcagg gatgacacca tgcgaggtgg
     6841 cattcccctc attgtcttcc acccagtgaa caagaggccc catgtgctca gtcttgaagg
     6901 agactagcca aagcctctat gtttttacta gttatcgaaa ctccttaggt gaaggcggcg
     6961 gtgtttccta tctcattaga aatcttttat gcaatagaac ctgacctggg ctgaagtttc
     7021 ctaaatgaga acatgcttac atcatcttgt gctgcattgg actaagtggt tcctgccctg
     7081 ccgagggacc tgctgagcag gactcttgct atactgcact cagaagggaa tcaaagtggc
     7141 aggaagttgg acaagtagcc atgaaaacta gcccaaaaag cgttctgagg cagaacacag
     7201 tgcatcgggg tgaaggggca ggtattccca caaaggggtc ccaggaagac agcactgaga
     7261 acaccaatga gacccagggc aaagcccagt gagtgcggac ccagacttag gctggggagc
     7321 agcctgctgc tgcacagcac caaagacaac acctcaagcc tccacagccg ctgtttgaag
     7381 ggctcgagtt gactgatgct cttacattcc ctgctgtctc agggatcagc aactggtggg
     7441 actcaagccc catttccttt cgtaagcaca ggtaagctga gtaacaacct acctgagtgt
     7501 gtgtcaccag tgctagaagg aaatggctgt gactgtttct gagtttcact ttattaatga
     7561 aaaactaatg gcgtccttac tagcaaactt gtaagagtcc tcaaacaata ttgaagtctc
     7621 ttgaatttca gaactgtgca ctcaaacatc tgttaaaaca gtaagatgca aggtgtatat
     7681 cccagaggac tggggtgctg cccagcagta tcagacctgc cacagaacgt ttcccctcgt
     7741 atctgccatg tcaggtacag gaacagtcag aggcccaatt ctcttttctt gttgttgttt
     7801 tcttgttact ttgttgcttt cccagaacag aaaggccttc atcatcagct tataaacaca
     7861 agagtgatgt ctcgggagct ccctgcctta cagggagtat gcagacctga aaaggcagag
     7921 cacgcagtct gtgagctgag agggcatgct caggtggaaa gtgtgctata tgagtaacct
     7981 atcagcaagg ctttcagaga tctaaggtca gaaagattac tgtccatggg catgtccagg
     8041 ttgaaaatgt ccctattctt gggctagtaa gatgacatcc ttctaaagga atgttgggac
     8101 agaatagtct accataaagc cctgagcatc cagtcttccc acacaccagt ctacatgaat
     8161 ccactttgta tcctctattc ccttcttaag agcaatatct aaatcattca agttacatca
     8221 tgttagatga ttccccaaag cctcaagaaa gagggcagtg tgagggcttg agttcaaagc
     8281 aagccagcct acctaaatag atacccatag cactgtgaaa acatgctctc cttggtggtt
     8341 cccaaagtag cctccttcct agagaaccag acattacccc ctttcatgtt tgtggggaat
     8401 tcctatagca tcagaataag tatgtaataa atgctatcca gcagatccaa gactggtaca
     8461 gtaagaagcc aggtgtcctt ctgtagccac cagcacacac ccaaactccg cctcctattt
     8521 tcttcttgta gcactgactt gcctgacaat cattacagag caaaccgtga gcccgtcttc
     8581 cccaaggctc taagtggcct gtgtttggaa ccttgtgggg tcaggaggct aagagagaat
     8641 cagacagaat tgtgtggatg gataccctgt gtaagaaacc atcctttttt agctcaccat
     8701 tctatgtgtt ttctttctta agccaaaaat catcttattt aagaattttt ctcttacaaa
     8761 gaatttggtg gggaaaactt gctaccaact cataagaaat gccagactag tgtgtacaca
     8821 cacagggcca ggaagcaagc tcacgcctca cccaggggat ggctgtactt aaattggatg
     8881 tggggtgctg aggaggccca tcccatgtta gttgtaattg ctctcctgga ggagcattga
     8941 acacatccca gtggaggcgt gttgactcag tgtcagtgag actatcccac accttcagca
     9001 ggttactgca gctatacagg accatccaga ggctctgacc aaatcaaaca taaacagaag
     9061 ctcatttgct tccaatccat gaccaaagcg gccagagaca gaaaaacgcc cttccgtctg
     9121 ctggaatttc actctgataa cacgtctgtt gttaactgtg acctgttaag agttctccat
     9181 gtggacacag ttcttgtggg atggttccgt tagcatcctc cttcatcaac caccaagact
     9241 gcctgtggaa tcagcttctg tagtcaaaca cctgaagagc ccatgtttaa atgcctgtag
     9301 actttatgtt tagcctgtgt ttcagtgtgt aaacgattga gcagctgggg accgaggatg
     9361 gacggtggta cacattctgt cctctttgca ctttagtttg tgtgtaagct tctgtgtttg
     9421 gtctgggtgc ttttggcgag tccacttgtg ctctccaaaa gcacgaccac gcaaccacgc
     9481 cgagtttaag ggtccctgga agtagcagaa aataaaagcg agctctcgga gacccacgaa
     9541 ctactccaac ttcctcagga gtccaagcca actaagcaca aaaacaaaat actcacctgg
     9601 tgcccaggct gtcagcccac ccgtgttcct agcacaggcc cccagagagc aggtgcagaa
     9661 ctaacgcttt ccgagtcgtt tgtctgcttg ttactagata agctcagtgg tgagagagat
     9721 ggccagccac ctgcaggcga ggtgttccat ctgtaatcag caccttgagc caagcacctc
     9781 tgtggctctc ggagttaatt cagtgccagt ggatggccat ttcaatgtca cgttgaagca
     9841 cctttaatgt tttgttgttg ttattatttt aaaataatgt atttgtgaag tggataaaag
     9901 aaacactgga aaccgggtgc ttctgaaaac atcaagtata aaacatgaac aaggtctgtg
     9961 gtgctctatc cagctgtgca aacaaccctg aagatgggtg gagtggttag ttctctgctt
    10021 tggctgattg tgcctgagag tgtatttatt tgttaagcct tacgttcaga agaaatacac
    10081 cttgaatttt ggctaacatt atagaacgtt ctgaaaattg ccttctacat tttttaacac
    10141 aatttaatca tttttataaa ttaaggccac ttttggacag ccttcttgta ccagagacca
    10201 attaccatcc gttggtctgc aggcctcttt ttattatgtc cttgtaataa tgtaaaatat
    10261 ttacagcaaa c
//
