LOCUS       NM_001164725            1914 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus Fc receptor-like 6 (Fcrl6), mRNA.
ACCESSION   NM_001164725 XM_001002083 XM_001477207
VERSION     NM_001164725.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Honjo,K., Won,W.J., King,R.G., Ianov,L., Crossman,D.K.,
            Easlick,J.L., Shakhmatov,M.A., Khass,M., Vale,A.M., Stephan,R.P.,
            Li,R. and Davis,R.S.
  TITLE     Fc Receptor-Like 6 (FCRL6) Discloses Progenitor B Cell
            Heterogeneity That Correlates With Pre-BCR Dependent and
            Independent Pathways of Natural Antibody Selection
  JOURNAL   Front Immunol 11, 82 (2020)
   PUBMED   32117244
  REMARK    GeneRIF: Fc Receptor-Like 6 (FCRL6) Discloses Progenitor B Cell
            Heterogeneity That Correlates With Pre-BCR Dependent and
            Independent Pathways of Natural Antibody Selection.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1914)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   4  (bases 1 to 1914)
  AUTHORS   Fayngerts,S.A., Najakshin,A.M. and Taranin,A.V.
  TITLE     Species-specific evolution of the FcR family in endothermic
            vertebrates
  JOURNAL   Immunogenetics 59 (6), 493-506 (2007)
   PUBMED   17356879
REFERENCE   5  (bases 1 to 1914)
  AUTHORS   Wilson,T.J., Presti,R.M., Tassi,I., Overton,E.T., Cella,M. and
            Colonna,M.
  TITLE     FcRL6, a new ITIM-bearing receptor on cytolytic cells, is broadly
            expressed by lymphocytes following HIV-1 infection
  JOURNAL   Blood 109 (9), 3786-3793 (2007)
   PUBMED   17213291
REFERENCE   6  (bases 1 to 1914)
  AUTHORS   Maltais,L.J., Lovering,R.C., Taranin,A.V., Colonna,M.,
            Ravetch,J.V., Dalla-Favera,R., Burrows,P.D., Cooper,M.D. and
            Davis,R.S.
  TITLE     New nomenclature for Fc receptor-like molecules
  JOURNAL   Nat Immunol 7 (5), 431-432 (2006)
   PUBMED   16622424
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC131177.9.
            
            On or before Sep 13, 2009 this sequence version replaced
            XM_001002083.2, XM_001477207.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ470838.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849383,
                                           SAMN01164131 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               AC131177.9         70358-70479         c
            123-143             AC131177.9         67965-67985         c
            144-416             AC131177.9         66981-67253         c
            417-698             AC131177.9         66550-66831         c
            699-821             AC131177.9         66131-66253         c
            822-853             AC131177.9         65711-65742         c
            854-1914            AC131177.9         64568-65628         c
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 80.0 cM"
     gene            1..1914
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /note="Fc receptor-like 6"
                     /db_xref="GeneID:677296"
                     /db_xref="MGI:MGI:3618339"
     exon            1..122
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..898
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /note="fc receptor-like protein 6; cell surface
                     glycoprotein gp42; fcR-like protein 6"
                     /codon_start=1
                     /product="Fc receptor-like protein 6 precursor"
                     /protein_id="NP_001158197.1"
                     /db_xref="CCDS:CCDS48448.1"
                     /db_xref="GeneID:677296"
                     /db_xref="MGI:MGI:3618339"
                     /translation="MLLWMVLLLCESMAEAQELFPNPELTEFTNSETMDVILKCTIKV
                     DPKNPTLQLFYTFYKNNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGY
                     LDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLA
                     PSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKFPLVVSGTAWIKSNMLPIWL
                     PASLLGGMVIAAVVLMYFFKPCKKHARPETPTLKEPDSFLYVSVDNQRYK"
     exon            123..143
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
     exon            144..416
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
     exon            417..698
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
     exon            699..821
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
     exon            822..853
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
     exon            854..1914
                     /gene="Fcrl6"
                     /gene_synonym="FcRH6; mIFGP6; moFcRH6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccactcacct ccagctcaga actaccagtc tctctctccc cagcttcagc tctgcctgct
       61 gtttggcctg ctctgcctca agaaaggcac catgctgctc tggatggttc tcctgctctg
      121 tgagtccatg gctgaagctc aagagttgtt cccaaatcct gagctgacag aattcaccaa
      181 ttcagagacg atggatgtca tcctgaagtg taccataaag gtggacccca agaatccaac
      241 tttacagctc ttttacactt tctacaagaa caaccatgtc attcaagaca ggagtcccca
      301 ctcagtattt tctgcagaag ccaaggagga aaactctggg ctctaccagt gtatggtgga
      361 cactgaggat ggcttaattc agaaaaaaag tggctatctg gatatccagt tctggactcc
      421 tgtatcccat cctgtgctca ctctgcaaca tgaagccact aaccttgctg taggagacaa
      481 ggtggagttc ctctgtgagg cccaccaggg ctcccttcca atcttttact cattctacat
      541 taatggagaa atcctaggga aacccctggc tccctctggc agagctgcct ccctcctcgc
      601 ctcagtaaag gcagagtgga gtaccaagaa ctattcctgt gaagctaaaa acaacatctc
      661 cagagaaata agtgagctca agaagttccc cttggttgtc tcaggtactg cctggatcaa
      721 gagcaacatg ctacctatct ggctacctgc aagcctgctt ggagggatgg tcattgcggc
      781 tgtggttcta atgtatttct tcaaaccctg taaaaagcat gccagacctg agacgcccac
      841 cctaaaagag ccagacagtt ttctatatgt atcggttgat aatcaaagat ataaatgaga
      901 ttcccaccaa tgatttggat tcaaaaacca ggacctgcca agatcccctt ggtctttagg
      961 atcatgctct gtgttagtgc aatgtcttcc tccaacatac actcaactcc agctcccagc
     1021 ctccaccctc cagcactcag cagtggctcc aagttctccc tgcaggtcac ccagttccta
     1081 gcccagcagt gagaaagccc atttgcccta ttcctggcca gggctcctga actgtgggtt
     1141 ctcttctgag cgggaaacca aacaatggtg tgggaatgaa caatttccac cttgatacat
     1201 acatatacac atgcctacac acaaacaaac acacatacac acacacttcc agatgtaaca
     1261 ttgtacacag agccacagtt atcttcttta agtacaaaag gaaaagggtt ttcacctcca
     1321 gatagacaga tgatagatac acagacacac aagacagata gatgatagat aacatataga
     1381 ttagatagat aatagataga tggtagatag gtagatggat gatagataga tgatagatag
     1441 atagatagat agatagatag atagatagat agatagatag atagatagat agatagataa
     1501 taagtaacat gacagataag atgatagaaa taagacacga taactaaata cagataaata
     1561 tgtatgtatg cttgtggatg aatggacaga gagaatttta tatagaaaga aaatatactt
     1621 gcctttatcc tgaaaggaaa gcacaaaacc ttgactacaa gactaacagg cctctgggaa
     1681 gttcagcaag accaaggtgt acccataaat gggctgccca tacaatatca tagaatcttg
     1741 ataagggatc agagctgtga aggcagaaat aactctgcct tcacctgcaa ttctcagcat
     1801 gcccagttca gaaacagacc tcagctcacc caaagctcca gactactgag tgccccagaa
     1861 aagtcactca ctgatgtctt gtattttaaa agtggttgta aaatacagtg tgtt
//
