LOCUS       NM_176982               2117 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Mus musculus F-box protein 48 (Fbxo48), transcript variant 1, mRNA.
ACCESSION   NM_176982
VERSION     NM_176982.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK037835.1.
            
            On Jun 3, 2003 this sequence version replaced NM_176982.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Variants 1 and 2 both encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK037835.1, SRR9219380.43711.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 9.41 cM"
     gene            1..2117
                     /gene="Fbxo48"
                     /gene_synonym="A630050E13Rik"
                     /note="F-box protein 48"
                     /db_xref="GeneID:319701"
                     /db_xref="MGI:MGI:2442569"
     exon            1..1055
                     /gene="Fbxo48"
                     /gene_synonym="A630050E13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1056..1167
                     /gene="Fbxo48"
                     /gene_synonym="A630050E13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1500
                     /gene="Fbxo48"
                     /gene_synonym="A630050E13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1501..2117
                     /gene="Fbxo48"
                     /gene_synonym="A630050E13Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2117
                     /gene="Fbxo48"
                     /gene_synonym="A630050E13Rik"
                     /note="putative"
ORIGIN      
        1 ggagccggca ccgcgccttt aggtaggaga ggcagctctg cccttccctg cacagggacc
       61 agcgtgctca gctgtggtcg gtcgcttctc ctgcctgtcc tcacagcaca gggatgtggt
      121 tgcgctcgcc aggactggtg tgggctccct gagaactagt cttgcccgac gatgctcttt
      181 ctcggtttgc tcactcctag tgacatttga caggacggtg gatggagggg ctggaggtgg
      241 cccagagtga ccgctcttct caaagaccca ggtttagttc ccagtgtcca cagaggggtc
      301 ttgccactga ctgttactcc atttcgggga tcccaccccc cttttggctc ctgcgggcag
      361 cgcacgcact gtgtgctgag acttgtttgc aagcaaaccg gcaatacaca tacatagaag
      421 cagatctttg aaaaggaggt gggaggaccg caagctaacg caatatttcc gcaaggttgg
      481 ttcaaaaaga ggcgacatac aaggaatagc tttcgaggca ttcaagagag ataatttaga
      541 agattcctag tgagattttt gggaatatga ccaaggcacc acagaatgtt caattgaaaa
      601 acttcctgcc tcttgtggaa ttcctttgac agaaggaaag attttattcc tagggagagc
      661 ctgggagaaa cagcaaacat ctgagtgtag tgtaacctcc taatagaaac ttagtttcaa
      721 agatgacact ttgcctttag tttgtaccag tggtaggagg ggagaaggtt cgttgcaaat
      781 acttgatctt gtgggttttg tcttgttttt gcacaccaag ttgctttcta ttttctattt
      841 ctaaaggaag cccctgttca gttcagacat tacagttcta accacaacca gtttggatca
      901 taaacagcct aaccaaaggt agtcaccatg atgttactaa ctacaaagac tcgagtagtg
      961 catctgaaaa gggaattgtt agtcactgaa tgaagagata tttagctata catcaaatgc
     1021 ctattgtatc ctgattctcc accacaaaag gaactgtcag atgttggcca cttgttttta
     1081 cgcacgccac ctggcagtct tcaagaaaca cacacgagac acggcatgga ttcgtccttg
     1141 cagattaaga ggctgaagtc aagaaatgtt gcatatgaag acaattggta aacaatgaag
     1201 aaaacctcca agaagaacaa taatttcaaa attcctggta cagaattgaa ttccgcggat
     1261 gctgaaaggg gaaaagaaga gagtcaacgt aactttgttg aactactgcc cttggaagtc
     1321 acttataaaa ttttcagcca gctagacatt cagagtttat gcagagcttc caggacatgc
     1381 acaggttgga attgtgcaat aagaaacaat gactccttat ggaaacccca ctgcttgacc
     1441 ataagagctg tgtgccaaag agaaatagac gatgatataa aaagtggtta tacctggagg
     1501 gtaatactcc taagaaatta ccagaagagc aaagtgaaat atgagtggct aagtggcaga
     1561 tacagcaaca tccgttctcc tgttaacttg ccagaaaagg ctatgtgccc catggatgca
     1621 gatacgtggg gggaaattct agatgcagaa ctggaaagag aagttgaaaa attgcaatag
     1681 ttttatgcca cgtgatcaaa atcactcgga ctccaagata ctttgaaatc tgataatgtc
     1741 tttcttagcc ttttaagtat ttaacattta aaagaaaaca aagttgaaaa tgaagctttg
     1801 tttgtatttt gcactcaagt taaaaaattt ttctggtctt atactatggg gaaatcatga
     1861 aatgttattt ttataagaaa taatagactg gtagaatgat tttgaaatgt attgctccat
     1921 gtatttatgt tagaatattg aattacttga agtgatagaa tttattgttg ttttctattt
     1981 aaaccttcaa gaatttaggg gatttttgaa gaaacttatt taaacattca ttataaataa
     2041 gtataaatat gctctcatgg gggaatatca aagtaagtag ttgtaatata tttaaattga
     2101 taataaattt acatgtt
//
