LOCUS       NM_001099688            1711 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus F-box protein 39 (Fbxo39), mRNA.
ACCESSION   NM_001099688 XM_892822
VERSION     NM_001099688.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Jin,J., Cardozo,T., Lovering,R.C., Elledge,S.J., Pagano,M. and
            Harper,J.W.
  TITLE     Systematic analysis and nomenclature of mammalian F-box proteins
  JOURNAL   Genes Dev 18 (21), 2573-2580 (2004)
   PUBMED   15520277
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BU937284.1,
            AL929071.6, AV040000.3 and CR519476.1.
            
            On Dec 11, 2007 this sequence version replaced NM_001099688.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-573               BU937284.1         4-576
            574-1132            AL929071.6         87478-88036
            1133-1245           AV040000.3         442-554
            1246-1246           AL929071.6         88642-88642
            1247-1422           AV040000.3         556-731
            1423-1701           AL929071.6         89383-89661
            1702-1711           CR519476.1         3-12                c
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 44.0 cM"
     gene            1..1711
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /note="F-box protein 39"
                     /db_xref="GeneID:628100"
                     /db_xref="MGI:MGI:3505735"
     exon            1..92
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            93..1197
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             172..1503
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /note="F-box protein 38"
                     /codon_start=1
                     /product="F-box only protein 39"
                     /protein_id="NP_001093158.1"
                     /db_xref="CCDS:CCDS36214.1"
                     /db_xref="GeneID:628100"
                     /db_xref="MGI:MGI:3505735"
                     /translation="MDEDCEVTQLQEQSCWATLPDVCLRRVFWWLGDRDRSRAALVCR
                     KWNQIMYSADLWRYRTITFSGRPSRVHASEFESALWYIKKFGRYLEHLEIKFLNPYNA
                     VLTKKFQVTMRGLLSCLGKSNNRLRSLSIQHLELDRLVWRNSIRGSLIKSLSFFLKKM
                     GKHLDHLSLKGARLTVEQGCHILNSLSYMQNENMASELNIEDFFSHHLAVYGSSQFNK
                     AMATFRNLTFLTLNYNCISDELLETLSENNAGTLRTMNIKCHVHDPHGQVVWGMSWAK
                     LARQASNLKVNFFFERVMKYERLARILLQEIPVRSISLRSCYFSDPDWSMRPTLTDLL
                     PTFRNTLQKLTFEFNNNHESLDEQLHLLILACRKLFYFKIWAFLDVKFVERILKSQEE
                     GQCSLHTLKVRIYTNRYETNEEDRTLREIYRKYRKLIDSELNYFVVAYPMM"
     exon            1198..1374
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1711
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1711
                     /gene="Fbxo39"
                     /gene_synonym="1700010H23Rik"
                     /note="major polyA site"
ORIGIN      
        1 gatgctcttg gagtcggcgt gggagcagca gcgcgggcag aggggcaggc gcgctccgcg
       61 tccctgcagc ccgagccggg cgcagcgatc cgagaacacg tgactgtatt ctttccccat
      121 ttggggaagc cctgctcacc acaccactac gctgtacatc agggtccttt gatggatgaa
      181 gactgtgaag tgacccagct ccaagagcag agctgctggg ccactctgcc agatgtgtgc
      241 ctgcgacgtg ttttctggtg gctgggagac agggacaggt ccagagctgc cctggtctgc
      301 agaaagtgga accagattat gtactcagct gacctctggc gatacaggac catcacgttc
      361 agcggaaggc cgtccagggt acacgcatct gaattcgagt cggcactgtg gtacattaag
      421 aaatttggcc gatacctgga acacttggaa atcaagttcc tgaaccctta caatgccgtc
      481 ttgaccaaaa agttccaggt caccatgcga ggcctcctgt catgcctggg caagagtaac
      541 aaccgcctgc ggtcactctc tatccaacac ctggagctgg atcggctggt ctggagaaat
      601 agcattaggg gttcactcat caagagcctg agttttttct taaagaaaat gggcaaacac
      661 ctggaccatc tcagcctgaa aggagcccgg ctgacagtgg agcaaggctg ccacatcctc
      721 aactccctga gctacatgca gaatgagaac atggcttcag agctcaacat tgaagacttc
      781 ttcagccatc acctggctgt ctatggcagc tcccagttca acaaggccat ggccaccttc
      841 cgcaacttga cattcctaac cctcaactac aactgtatct ccgacgagct gctcgagacc
      901 ttgagcgaga acaacgccgg gaccctccgg accatgaaca tcaaatgcca cgttcatgac
      961 cctcacggtc aggtagtctg gggtatgtct tgggccaagt tggccaggca ggccagcaac
     1021 ctgaaggtga acttcttctt tgagcgggtg atgaaatatg aacgcctggc ccggatcttg
     1081 ctgcaggaga ttccagtcag gagcatcagc ctgaggagtt gctatttcag tgacccggac
     1141 tggtccatgc ggcccactct gacagacctc ctgcccacct tccggaacac cctgcagaag
     1201 ttaacgttcg agttcaacaa taatcacgag tctctagatg agcagctgca tctcctcatc
     1261 ttggcctgtc ggaagctgtt ttacttcaaa atctgggctt tcctggacgt taagtttgtg
     1321 gagcggatcc tgaagagcca ggaggaaggg cagtgctccc tgcatacact gaaggtgaga
     1381 atttatacaa accgatatga gacaaatgaa gaggacagga ccctacggga aatttacagg
     1441 aaatacagaa agctgatcga ttcagaactt aactattttg tcgtcgccta ccccatgatg
     1501 taaagagtgc tctccagagg aagacatcta gatgcacttt gaacctgaaa acctggttct
     1561 cagtgaatta gatttggggc tcccgtgccc tcattccttt ttcttctctc ttctttagcc
     1621 agttccacac catcatgacc agccttgtga aggctgggct ggtggtgatg gcaaggttcc
     1681 aagcatcttt aaagtgctat ctttaccaac a
//
