LOCUS       XM_036164645            5619 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phenylalanyl-tRNA synthetase, beta subunit
            (Farsb), transcript variant X1, mRNA.
ACCESSION   XM_036164645
VERSION     XM_036164645.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5619
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..5619
                     /gene="Farsb"
                     /gene_synonym="Farsa; Farsl; Farslb; Frsb"
                     /note="phenylalanyl-tRNA synthetase, beta subunit; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 287 ESTs, 1256 long SRA reads, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23874"
                     /db_xref="MGI:MGI:1346035"
     CDS             3723..5510
                     /gene="Farsb"
                     /gene_synonym="Farsa; Farsl; Farslb; Frsb"
                     /codon_start=1
                     /product="phenylalanine--tRNA ligase beta subunit isoform
                     X1"
                     /protein_id="XP_036020538.1"
                     /db_xref="GeneID:23874"
                     /db_xref="MGI:MGI:1346035"
                     /translation="MLSTEANSSPWIRNPKTSGSSLEYNADEEFDELCFEFGLELDEI
                     TSEKQIISKEQGHGKAQGASDVVLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVY
                     KRVMPKGDIQKLVITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKR
                     ALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLH
                     IIESKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTDFTKAKIVLDII
                     VTMFSEHCENQFTVEAVEVVSPNGKSSTFPELPYRKEMVRADLINKKVGIRETPANLA
                     KLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYT
                     IANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKT
                     AEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYY
                     NKTPGFEIIHGLLDRIMQLLDVPPGEESGGYMIKASAGSAFFPGRCAEIFVGGQSIGK
                     LGVLHPDVITKFELTMPCSSLEINIEPFL"
ORIGIN      
        1 aaatgaagtg tgggtgtcat ttgttttttg tttttttttt tgtttttttc catttttgtt
       61 tgcctctttc tctttttttg tgctcttaca tgtcacctta ttgagccctc tagggctgct
      121 gcccatctga accccactgt catttccagc tgccgtcacc ttccatttct cttggcagtt
      181 tttgttgccc agggcatttc ctttcccctg ttgcccttgg cgcagctctg tcttcctaat
      241 cctccttgcg attgcctttc tgttcagttg tgttcttgtt acttactttt tgtttgttct
      301 ttgatattca ttttcttgtg aactggtttc tgattgctct tcagcctggg ccctgttcta
      361 gcttggtaca gtaagtactg tcagagccac ctgtgtgcca cacaggtttt taggtttacc
      421 attttattgt agggacttat tcatggtttt acttttgctt ctttctttca tttaagtttt
      481 aaaaatatag cttaaaggaa taaggaataa gattcaatat attctagtaa tgcatacaat
      541 ttgatttatt gccatttggc tgacaagatt tttgcatatt acaaagtgag tgtttgctac
      601 ttagtttctg atggttaaga tttgatattt ggtggtcctg tattttactc caagttgcag
      661 atctgaagtg gggtcaagag ctcattgggg ctggagaatc tgcttctaag ttgtttctta
      721 agtcatcacc atctttatta ttatttagac ttaaaccaat ttatatgtat tagtgttttg
      781 ctttgcatca gatgcgtgtc tggtgcctgt ggaggccaga agagggcatc agatggcctg
      841 gaacttgagt tacagatgac tgtaagccac cacgtgggtt ctgggaatca aacctgggta
      901 ctctgcagta gtaacaagtg ttctcaattg ctgagccatc tctcctctgc taagtttcct
      961 taagcggttt cattaagcgg ttttgtttac ccactgatgt tttccagttc cttctacctt
     1021 ggcttttgtt aatttgtccc agaaggagaa ctcttgagag agcaggtaaa cgggagcgct
     1081 taagtactat cctctgtgtt tgataattgc tcagacatgc tattccatcc ttttccatat
     1141 tctgttggtg acagagacca atcctgagct tgcataaggg aactagatag acaggtatca
     1201 ttggaatcag tctctccaca cagtcaccaa atggttcttg ttcatccaca tgcaaaatat
     1261 acttgtccta gaagtgtcat cttagagcac catccacagt gagacatctg aacctggttc
     1321 tgacgtggat gagcgtctta ggatgtttag catcttgtga tagatgagtg ctgtccgagt
     1381 gcggagaggc tcaagcacta ggatgggtgt ctcccataca tctaagatgc catagagaga
     1441 catagccggc ctaactactg gaggagccat tggtccacta cagttctgaa actgaatggc
     1501 aactgcagga tggtcttgat taggtctcag gcctgggata attctccatg gctccgtgcc
     1561 tgccctctag gctctgattc caccgtctga gtggccccag aaagcatgtg cttcacagct
     1621 gattaccttc cttattctac ttcctgtcaa tagagtttta ggggctcaaa gacttccttt
     1681 tgtctttctt ccgccccttt cagttcaagt tggctatgtc tgccgaagtg tttttttcta
     1741 aaaactttct gggtctttgg tgaatttttt ggtggattcc tttatattag ttaaaaacca
     1801 cagactccaa aaacctctga aattagctgt ttcagtactt taagtttttt catacagtac
     1861 tcttaattaa actttattgt ttgattaatt ggatttgtga ggcacaccct tactttcttt
     1921 gttacacctt ttgtttgaac gaattgtgcc tttgatctgc ctgaaggttt ttcagtcaga
     1981 cattgattct atctcaggcc taggatttgg gctctgtcca gaacttactt aatttcagca
     2041 ttgctttaca tttagaaggc caaaaaaaaa tttttttttt aaatcaccaa cattctgtct
     2101 catttttgtt taatagctct ttctacattt atctcttctt aagtaagtgg taaaaacaaa
     2161 gcagaacaaa caagctgctc tttgagcaca gaagtcttag cagcatcatt ttcagcagtt
     2221 ggagtaccag cagcagtggt gctgatcaag tctctccctt acgggacaag gatgcccttg
     2281 tactttcctg cagcgttacc tgccttccct cctggccttt gcttgaatcc tgattcaaga
     2341 ccatggagct tcagccagta atgtttttgc agcccgtggg ttttcttttg caatcctcaa
     2401 agcctgcttt gtgattcaaa agctatttcc agagttctgg tgccacttcc tttacagagg
     2461 ctaagatttg tattagtctg ttgctacata acagaatatc ctgtttctta ggaggagaaa
     2521 acaatatgcc tttgttactt cacacaatgt cagagtgaca gggatcagag ggggttggct
     2581 gggtggttct ggctctagct tcttgctagg tggcaagcaa gctgccatct agaactgcac
     2641 tcacctcacg gattagctga gcttcctaac tcactcatgt gattgcacca tatataagct
     2701 cacacaaagg ggggccagga ggcaggatca tttcagacca tattggaggc taggtatctc
     2761 agttactgca tgcttttttt cacttaagtg agctgggagc cacgctgtac ttgctccctc
     2821 accatttctc ctgtaactag cccacctttg agccatacac attctgcttc taacacttct
     2881 catgttcctt cttccccata ttctgttggt ttacgagaac agctctgtgt ttcacctgtg
     2941 ctgttttagg atgctcccct tcttggttat cctccatcct tccccagtct taaaagttca
     3001 gatgtaagga accaagcttg attcctatag ctatgagaga aacacgtggg agtcggaggc
     3061 aggaggatct ggagtttgcc agccttggta tagataactt gcaggctgtc ctgggctacc
     3121 tatgaggcct tgtttcagaa gaataacaaa acaaaacaaa atgaagatac agagctaagg
     3181 agtttgggga agcacatcta ctcagggttt gcctagctag agagtccctg agtacagctc
     3241 tcattgcctg cgagtaggac agagggcaca tcccttggca tgtcatgagc tacccttttt
     3301 ctacttctta gatcctattt cttcctgaca caaacattat tcttcatcca tactgaacta
     3361 cttaggagtt cccagctatg ccaagcactt gattcactgc ttccaatctt tgagtaatga
     3421 agacatcctt tgtgtagctc taagtgaccc taagcggagc gttgtgccac ccctgaacct
     3481 tgtactggat ttatttactt acgcttatgg tttctttgct tgagaaggaa gtagttcagg
     3541 caggaatggt aatttattta tcttcatagc cctggtatct agtactgttt cttggcacat
     3601 aatggtagta aatatttgtt aaattgaatt gaagtttgat atctaggcca gacaagtctt
     3661 ttgtcgttgt tttattttga tgttgggaat tgaacctagg gccagtgggt gacatactaa
     3721 acatgctttc tactgaggcc aactcctcac cctggatcag gaaccctaag acatctggtt
     3781 cttctctaga atataatgct gatgaagagt ttgacgaact gtgttttgaa tttggtctgg
     3841 aacttgatga aattacttct gaaaagcaaa tcataagcaa ggaacaaggt catgggaagg
     3901 cacagggggc ctcagatgtt gtgctttaca agattgacgt ccctgccaac agatacgacc
     3961 tcctgtgtct ggaaggactg gctcggggcc tccaggtctt caaagaaagg atcaaagctc
     4021 cggtatataa gcgagtgatg cccaagggag acatccaaaa gctggttatc acagaagaga
     4081 cagccaaagt gcgccctttt gctgtagcag cagttctccg gaatatcaag ttcactaaag
     4141 accgatatga cagcttcatt gaacttcagg agaaactaca ccagaatatc tgcaggaaaa
     4201 gagcgttggt tgctattgga actcacgact tggacacttt atcaggccca tttacttaca
     4261 ccgcgaaacg tccttcagat atcaaattca agcctctgaa taagaccaag gagtatacag
     4321 cttgtgaatt aatgaacata tacaagactg acaaccacct taaacattat ttacatatca
     4381 ttgaaagtaa gcccctgtat ccagttatct atgacagcaa tggtgtggtc ctgtcgatgc
     4441 ctccgattat aaatgggaat cattcaaaaa taacagtaaa tactaggaat atatttattg
     4501 aatgcacagg gactgacttc actaaagcaa aaatcgtgct tgacattatt gtcaccatgt
     4561 tcagtgaaca ctgtgaaaat cagtttacag ttgaagcagt tgaagtagtt tctcctaatg
     4621 gaaaatcaag tacctttcca gagctgcctt acagaaagga gatggtgaga gctgatttaa
     4681 ttaacaagaa agttggaatc agagaaactc ctgcaaatct cgccaagctc ctgaccagga
     4741 tgtgtctgaa gtcagaagtc ataggtgacg gcaatcagat tgaggttgaa attcctccga
     4801 ccagagcaga tgtcatccat gcatgtgaca ttgtggagga cgcagctatt gcttatggct
     4861 ataacaacat tcagatgact ctgccgaaaa cgtacaccat agctaatcaa tttcctctca
     4921 acaagctcac cgagctcctc agacttgaca tggctgcggc tggcttcacc gaagcactga
     4981 cttttgctct gtgctcccaa gaagatattg ctgacaagct tggcctggat atctctgcaa
     5041 caaaggcagt gcacataagt aatcctaaaa ccgctgagtt ccaggtggcg cgcactaccc
     5101 ttcttcctgg ccttctaaag accattgcag caaaccggaa gatgcccctt cctctcaaac
     5161 tgtttgaaat ctctgacgtt gtagtaaaag attctggcaa agatgtaggt gcgaaaaact
     5221 acaggcatct ctgtgctgtt tattacaaca agactcccgg gtttgagatc atccatggct
     5281 tgctggacag aattatgcag ctgctcgatg tgcctcctgg tgaggaaagc gggggctaca
     5341 tgatcaaagc gtctgcaggt tctgcctttt tccctggacg gtgtgctgag atctttgttg
     5401 gaggtcaaag cattgggaag ctaggcgtcc ttcatcctga tgttatcacc aaatttgagc
     5461 tgaccatgcc ctgttcctct ctggaaatca atattgagcc ctttttgtga ggttggtctc
     5521 tgagtgtccc tttctgctcc tgtggtgtcc ttcagccctc ttttacagca catatccatt
     5581 tgtgcgttaa tgtttaataa agtgaaatgt gctatctga
//
