LOCUS       XM_006530663            3178 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Fanconi anemia, complementation group A
            (Fanca), transcript variant X3, mRNA.
ACCESSION   XM_006530663
VERSION     XM_006530663.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006530663.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..3178
                     /gene="Fanca"
                     /gene_synonym="FACA"
                     /note="Fanconi anemia, complementation group A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 mRNAs, 30 ESTs, 47 long SRA reads, 9 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:14087"
                     /db_xref="MGI:MGI:1341823"
     CDS             40..3156
                     /gene="Fanca"
                     /gene_synonym="FACA"
                     /codon_start=1
                     /product="Fanconi anemia group A protein homolog isoform
                     X3"
                     /protein_id="XP_006530726.1"
                     /db_xref="GeneID:14087"
                     /db_xref="MGI:MGI:1341823"
                     /translation="MPGSPARGAAMGGGPRGLRKTWTELLAGRVKKQKYDPEREQKLK
                     DSALKLLRYHQNMHDLLLEVEEPQCKRLRLSELIDRDSADASSDRSASFIRSAFRDQA
                     SRLGVPVGVLSAKVFARSVQQVCVEPSHPVLLSPEQSKKLSSLLMIARHLLAQNMFSR
                     LTFCQELWKAQNSLLLEAMWRLHTHSVVSLQELLQSHPDSEAMAMWLFRNLRSLCEQI
                     GASCPSPDTTEAMLSGLVQLLISRGFQGSSDPRRLVEPERLPQVATDVLQRMLAFSLD
                     TLEADPQTTLDCQAVSGWIPIYSGHTCCGVVTENSLKSFFSHTLTQILTHKPVLKVSD
                     AIQMQKEWSFAKTHHLLTDLHCRVLATLGPEESVGRLQEVLEMQEVNWQHVLSCVSTL
                     VVCFPEAQQLVKGWVASLMARAFESYHLDSMVTAFLIVRQATLEGPYVFPSYADWFKE
                     SFGSSHGYHSCSKKTLVFLFKFLSDLVPWEAPRYMQVHIFHPPLVPSKYHSLLTDYIS
                     LAKTRLADLKVSLENVGLYEDLSSPGDIAERESQAVQDVKKAIMVFEQTGKIPMPVLE
                     ASIFRRPYYVSHFLPTLLAPRVLPEVPDPRVALIETLKRADKIPSSIYDAYRKACASA
                     EKQQPENATSAQRTEADCAKEPLGLLTAALEELRALMTDPTQYSVISAQVAVVSEKLN
                     AVLGHRNDGGSLQRAKIQLSVLPSTLQKQDQAVVDLLLTAFCQNLMAASSFVPPERQS
                     PWAVLFVRTLCGHVLLPAVLTRLRQLLRHQGQSLSTSHVLGLAALAVHLGECRSMLPE
                     VDPDVLAPSAGSLCVPDFLNSLLTCRTRDSLLFCMNFCTAAVSYCLCKFSALRNCLSP
                     GLIKKFQFVVLRLFPEARAPCAPEHAACVPWRPLYLPSADWQRAALSLWRRDSFQELL
                     KDKEFYLTYRDWVQLELEIQPEADVLSDMERHDFHQWAIYERYLPAPTALGGCGGDLE
                     EACTVLVSEIMDFHQSSRSYNHSEDSDLVLGGRTGNKDILSRLQALRSDLNKVASVEE
                     SWAAGSEK"
ORIGIN      
        1 gaaggcagcg cgggctgcag agccggtgtt ccagacgcta tgccgggctc gccggctagg
       61 ggtgctgcca tgggtggtgg gccccggggc ctccgaaaaa cttggaccga gctgctggcg
      121 ggcagagtca aaaagcaaaa atatgatcct gaaagggaac agaaattaaa ggattctgct
      181 ctgaaactcc tgagatacca tcaaaatatg catgaccttt tgctagaggt agaagagcca
      241 cagtgtaaaa ggttgcgtct cagtgagctg atcgaccgcg acagtgctga cgcttcctcc
      301 gaccggtctg cttccttcat ccgctctgct ttccgggatc aggcctcgag gctgggagtt
      361 cctgtggggg tgctatctgc caaagtgttt gctcgcagtg tgcagcaggt ctgcgtggag
      421 cccagccacc ccgtgctgct cagcccggaa caaagtaaga agctgtcttc cttactaatg
      481 attgcccggc atttgttggc acaaaatatg ttctcccgtc tcaccttctg tcaggaatta
      541 tggaaagcac agaactcttt gttgctggaa gctatgtggc gtcttcacac gcacagcgtc
      601 gtgagcctac aggagctact gcagagccat cctgactcgg aagccatggc catgtggctc
      661 ttcaggaacc tacgatctct gtgtgagcag ataggtgcat cctgcccatc cccagatact
      721 acggaagcca tgctctctgg tcttgtgcaa ctgttaattt caagggggtt tcagggaagc
      781 tcagacccaa gaagacttgt agagcccgaa aggctgcccc aggttgccac tgatgtactg
      841 cagaggatgc tggctttttc acttgatacc ctggaggctg atccacagac gactttggat
      901 tgccaggcag tgagtggctg gattcctatc tactccggac atacgtgctg tggtgtggta
      961 acagagaatt ctctgaagag cttcttcagt cacacgctaa ctcagattct gactcacaag
     1021 cccgtgctga aagtgtctga tgccattcag atgcagaaag agtggagctt tgcaaagaca
     1081 catcatctgc tcacggatct gcactgcagg gttttggcga ccctgggtcc agaggagtca
     1141 gttggccgtt tgcaggaagt cctggagatg caggaggtta actggcaaca tgtgctctcc
     1201 tgtgtgtcta ccctggtcgt ctgctttccc gaggcacagc agttggttaa aggttgggta
     1261 gcctctttga tggcccgggc ctttgagagc taccacctag acagcatggt cactgcgttc
     1321 ctgatcgtgc gccaggctac tctggagggc ccctatgtat tcccatccta tgcagattgg
     1381 ttcaaggagt cctttgggag ctcacatggc taccacagct gcagcaagaa aacactggtc
     1441 ttcctcttca agttcctgtc tgacctcgtg ccctgggaag cccctcggta catgcaggtg
     1501 catattttcc acccacccct ggtgccaagc aagtaccact ccctccttac agactacatc
     1561 tccttggcca agacaagact tgctgacctc aaggtttccc tggagaatgt ggggctctac
     1621 gaggatttgt catcccctgg ggacattgcc gagcgtgaga gccaagcggt gcaggatgtt
     1681 aagaaggcca tcatggtgtt tgaacaaaca gggaagatcc caatgcctgt cctggaggcc
     1741 agcatattca ggaggcccta ctatgtgtca cacttcctcc ccacgctgct tgctccgaga
     1801 gtgctcccag aggttcctga cccccgggtg gccttgatag agaccctgaa gagagcagat
     1861 aagattccct cctcgatcta cgatgcctac cggaaagcct gtgcctctgc tgagaagcag
     1921 cagcctgaaa atgccacctc ggctcaaagg acagaggccg actgtgccaa agagcccctg
     1981 ggactgctca cagcagcact ggaagagctc agagctttaa tgacagaccc gacccaatac
     2041 agtgttattt ctgctcaggt ggccgtggtt tctgaaaaac taaatgctgt tctgggacac
     2101 aggaatgatg gtggcagcct ccagagagca aagattcagc tcagtgtcct tccttccaca
     2161 ctgcagaagc aggaccaggc ggttgtggat ctcctgctga cagccttctg tcagaaccta
     2221 atggcagcct ctagctttgt gcccccagag aggcagagcc cctgggctgt ccttttcgtg
     2281 aggacccttt gtggacacgt gcttctccct gcagttctca ctcggctccg ccagctgctc
     2341 cgccaccagg gccagagctt gagcacctct catgtcctgg gcttggctgc tcttgctgtc
     2401 catctgggcg agtgcaggtc catgcttcca gaggtggatc cagatgttct tgctccttct
     2461 gccggcagcc tctgtgtccc tgacttctta aacagcctcc tgacctgccg cacgagggac
     2521 tctctgctct tctgcatgaa cttctgcaca gcagcggttt cttactgttt gtgcaagttc
     2581 tctgccctgc gcaactgttt gtctccaggt ctgatcaaaa agtttcagtt cgttgtgtta
     2641 agattgttcc cagaggccag agcaccttgt gctccagagc atgcagcttg cgtcccctgg
     2701 agacctctgt accttccttc tgcagactgg cagcgtgctg cgctctctct gtggagacgg
     2761 gacagcttcc aagagctcct gaaggacaag gaattttatt taacttacag agattgggta
     2821 cagctggaac tggaaattca acctgaagcg gatgttctct cagacatgga aagacatgac
     2881 ttccatcaat gggcaatcta tgagcgctac ttgccagctc cgacggcttt gggcggctgt
     2941 ggtggagacc tggaagaggc gtgcacagtc cttgtcagcg agatcatgga cttccaccaa
     3001 agttcgagga gttacaatca ctcagaggac tcagacctgg ttcttggtgg ccgcacagga
     3061 aacaaggata ttctttccag gctacaggct ctgagaagtg acctcaacaa ggtagcctcc
     3121 gtagaggaaa gctgggctgc aggctctgag aagtgacctc aacaaggtag cctccgta
//
